itk4 migration

[clitk.git] / registration / itkOptMeanSquaresImageToImageMetricFor3DBLUTFFD.txx

diff --git a/registration/itkOptMeanSquaresImageToImageMetricFor3DBLUTFFD.txx b/registration/itkOptMeanSquaresImageToImageMetricFor3DBLUTFFD.txx
index d949e9b84419e2e94097edad7db727034d98e000..ec32c74f022147e3cb50f2d65f3a695ff8903a5e 100644 (file)
--- a/registration/itkOptMeanSquaresImageToImageMetricFor3DBLUTFFD.txx
+++ b/registration/itkOptMeanSquaresImageToImageMetricFor3DBLUTFFD.txx
@@ -3,7 +3,7 @@
 
   Authors belong to:
   - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
+  - Léon Bérard cancer center       http://www.centreleonberard.fr
   - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
 
   This software is distributed WITHOUT ANY WARRANTY; without even
@@ -14,7 +14,7 @@
 
   - BSD        See included LICENSE.txt file
   - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
+===========================================================================**/
 
 /*=========================================================================
 
@@ -115,7 +115,7 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
     delete [] m_ThreaderMSEDerivatives;
   }
   m_ThreaderMSEDerivatives = new DerivativeType[this->m_NumberOfThreads];
-  for(unsigned int threadID=0; threadID<this->m_NumberOfThreads; threadID++) {
+  for(ThreadIdType threadID=0; threadID<this->m_NumberOfThreads; threadID++) {
     m_ThreaderMSEDerivatives[threadID].SetSize( this->m_NumberOfParameters );
   }
 }
@@ -123,7 +123,7 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
 template < class TFixedImage, class TMovingImage  >
 inline bool
 MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
-::GetValueThreadProcessSample( unsigned int threadID,
+::GetValueThreadProcessSample( ThreadIdType threadID,
                                unsigned long fixedImageSample,
                                const MovingImagePointType & itkNotUsed(mappedPoint),
                                double movingImageValue) const
@@ -153,7 +153,9 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
 
   // Set up the parameters in the transform
   this->m_Transform->SetParameters( parameters );
+#if ITK_VERSION_MAJOR < 4
   this->m_Parameters = parameters;
+#endif
 
   // MUST BE CALLED TO INITIATE PROCESSING
   this->GetValueMultiThreadedInitiate();
@@ -184,7 +186,7 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
 template < class TFixedImage, class TMovingImage  >
 inline bool
 MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
-::GetValueAndDerivativeThreadProcessSample( unsigned int threadID,
+::GetValueAndDerivativeThreadProcessSample( ThreadIdType threadID,
     unsigned long fixedImageSample,
     const MovingImagePointType & itkNotUsed(mappedPoint),
     double movingImageValue,
@@ -213,7 +215,12 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
   }
 
   // Jacobian should be evaluated at the unmapped (fixed image) point.
+#if ITK_VERSION_MAJOR >= 4
+  TransformJacobianType jacobian;
+  transform->ComputeJacobianWithRespectToParameters(this->m_FixedImageSamples[fixedImageSample].point, jacobian);
+#else
   const TransformJacobianType & jacobian = transform ->GetJacobian( this->m_FixedImageSamples[fixedImageSample].point );
+#endif
   //double sum;
   unsigned int par, dim;
   for( par=0; par<this->m_NumberOfParameters; par+=3) {
@@ -250,7 +257,9 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
 
   // Set up the parameters in the transform
   this->m_Transform->SetParameters( parameters );
+#if ITK_VERSION_MAJOR < 4
   this->m_Parameters = parameters;
+#endif
 
   // Reset the joint pdfs to zero
   memset( m_ThreaderMSE,
@@ -265,7 +274,7 @@ MeanSquaresImageToImageMetricFor3DBLUTFFD<TFixedImage,TMovingImage>
           0,
           this->m_NumberOfParameters * sizeof(double) );
 
-  for( unsigned int threadID = 0; threadID<this->m_NumberOfThreads; threadID++ ) {
+  for( ThreadIdType threadID = 0; threadID<this->m_NumberOfThreads; threadID++ ) {
     memset( m_ThreaderMSEDerivatives[threadID].data_block(),
             0,
             this->m_NumberOfParameters * sizeof(double) );