Second version of clitkRelativePositionAnalyzer

[clitk.git] / tools / clitkRelativePositionAnalyzer.ggo

diff --git a/tools/clitkRelativePositionAnalyzer.ggo b/tools/clitkRelativePositionAnalyzer.ggo
index c2f4d6f1dcde5db762251b3389cce9ae0e7c25aa..202514daf45b0b836d8b25145230a7bd4a23bfb3 100644 (file)
--- a/tools/clitkRelativePositionAnalyzer.ggo
+++ b/tools/clitkRelativePositionAnalyzer.ggo
@@ -9,11 +9,20 @@ option "verbose"      v       "Verbose"                         flag          off
 option "imagetypes"     -       "Display allowed image types"     flag          off
 
 section "Input/Output"
-option "support"       i       "Input mask support"      string        yes
-option "object"                j       "Input mask object"       string        yes
-option "target"                t       "Input mask target"       string        yes
-option "output"        o       "Output image "           string        yes
+option "support"       i       "Input mask support"      string        no
+option "object"                j       "Input mask object"       string        no
+option "target"                t       "Input mask target"       string        no
+option "afdb"           a       "Input Anatomical Feature DB"           string no
+option "afdb_path"      -       "Path to search image in afdb"          string no
+option "supportName"   -       "Input mask support name in afdb"       string no
+option "objectName"    -       "Input mask object name in afdb"        string no
+option "targetName"    -       "Input mask target name in afdb"        string no
+option "output"        o       "Output image "                         string yes
+
+section "Options for building the relative positions"
+option "bins"           b       "Number of histo bins for fuzzy map"      int default="100" no
+option "nb"             n       "Number of angles to test"                int default="4" no
+option "tol"            -       "Target area loss tolerance (|0-1])"      double default="0.01" no
 
 
-option "afdb" a "Input Anatomical Feature DB" string no