Second version of rel pos analyzer

[clitk.git] / tools / clitkRelativePositionAnalyzer.ggo

diff --git a/tools/clitkRelativePositionAnalyzer.ggo b/tools/clitkRelativePositionAnalyzer.ggo
index 202514daf45b0b836d8b25145230a7bd4a23bfb3..cf0feb177341e5dff25aadb476bdc8637b18e04a 100644 (file)
--- a/tools/clitkRelativePositionAnalyzer.ggo
+++ b/tools/clitkRelativePositionAnalyzer.ggo
@@ -9,20 +9,23 @@ option "verbose"      v       "Verbose"                         flag          off
 option "imagetypes"     -       "Display allowed image types"     flag          off
 
 section "Input/Output"
-option "support"       i       "Input mask support"      string        no
-option "object"                j       "Input mask object"       string        no
-option "target"                t       "Input mask target"       string        no
-option "afdb"           a       "Input Anatomical Feature DB"           string no
-option "afdb_path"      -       "Path to search image in afdb"          string no
-option "supportName"   -       "Input mask support name in afdb"       string no
-option "objectName"    -       "Input mask object name in afdb"        string no
-option "targetName"    -       "Input mask target name in afdb"        string no
+option "support"       i       "Input mask support"      string        yes
+option "object"                j       "Input mask object"       string        yes
+option "target"                t       "Input mask target"       string        yes
 option "output"        o       "Output image "                         string yes
 
 section "Options for building the relative positions"
-option "bins"           b       "Number of histo bins for fuzzy map"      int default="100" no
-option "nb"             n       "Number of angles to test"                int default="4" no
+option "bins"           -       "Number of histo bins for fuzzy map"      int default="100" no
 option "tol"            -       "Target area loss tolerance (|0-1])"      double default="0.01" no
 
+option "angle1"        a       "Angle 1 (deg)"                    double       no      default="0"
+option "angle2"        b       "Angle 2 (deg)"                    double       no      default="0"
+option "inverse"        n       "Not flag : inverse of the orientation"     flag   off
+
+
+section "Compute some statistic on afdb"
+option "afdb"           -       "Input Anatomical Feature DB"           string no multiple
+option "afdb_path"      -       "Path to search image in afdb"          string no multiple
+option "station"       -       "Station name"                          string no