#include "bbcreaMaracasVisuContourControlPoints.h"
#include "bbcreaMaracasVisuPackage.h"
-
namespace bbcreaMaracasVisu
{
{
if (_manContourControl_1==NULL)
{
- _manContourControl_1 = new manualContourControler();
+ _manContourControl_1 = new manualContourControler();
_mContourModel_1 = new manualContourModel();
_mViewContour_1 = new manualViewContour();
-
_mContourModel_1 -> SetCloseContour( bbGetInputOpenClose() );
-
_mViewContour_1->SetModel( _mContourModel_1 );
_mViewContour_1->SetWxVtkBaseView( bbGetInputwxVtkBaseView() );
_mViewContour_1->SetRange( 2 );
_mViewContour_1->SetZ( 1000 );
-
//JSTG 18-06-07
_mContourModel_1->SetNumberOfPointsSpline(100);
-
-
//EED 3 oct 2006
double spc[3];
bbGetInputwxVtkBaseView()->GetSpacing(spc);
_mViewContour_1->SetSpacing(spc);
-
-
//EED 3 oct 2006
_mViewContour_1->SetColorNormalContour(0, 0, 1);
_mViewContour_1->SetColorEditContour(0.5, 0.5, 0.5);
-
-
_manContourControl_1->SetModelView( _mContourModel_1 , _mViewContour_1 );
((vtkInteractorStyleBaseView*)bbGetInputwxVtkBaseView()->GetInteractorStyleBaseView())->AddInteractorStyleMaracas( _manContourControl_1 );
_manContourControl_1->CreateNewManualContour();
_manContourControl_1->SetActive( bbGetInputActive() );
_mViewContour_1->RefreshContour();
} // _manContourControl_1
-
_mContourModel_1 -> SetCloseContour( bbGetInputOpenClose() );
_manContourControl_1->SetActive( bbGetInputActive() );
if ( bbGetInputVisible() == true)
} else {
_mViewContour_1->RemoveCompleteContourActor ();
}
+ double width = bbGetInputWidthLine();
+ _mViewContour_1->SetWidthLine( width );
+ _mViewContour_1->SetRange( 2*width );
_mViewContour_1->RefreshContour();
-
bbSetOutputManualBaseModel( _mContourModel_1 );
-
} // wxVtkBaseView
}
bbSetInputVisible(true);
bbSetInputOpenClose(true);
bbSetInputwxVtkBaseView(NULL);
- _manContourControl_1 = NULL;
+ bbSetInputWidthLine(1);
+ _manContourControl_1 = NULL;
_mContourModel_1 = NULL;
_mViewContour_1 = NULL;
//=====
// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
//=====
- BBTK_DECLARE_INPUT(Active,bool);
- BBTK_DECLARE_INPUT(Visible,bool);
- BBTK_DECLARE_INPUT(Type,int);
- BBTK_DECLARE_INPUT(OpenClose,bool);
- BBTK_DECLARE_INPUT(wxVtkBaseView,wxVtkBaseView*);
- BBTK_DECLARE_OUTPUT(ManualBaseModel,manualBaseModel*);
- BBTK_PROCESS(Process);
- void Process();
+ BBTK_DECLARE_INPUT(Active,bool);
+ BBTK_DECLARE_INPUT(Visible,bool);
+ BBTK_DECLARE_INPUT(Type,int);
+ BBTK_DECLARE_INPUT(OpenClose,bool);
+ BBTK_DECLARE_INPUT(wxVtkBaseView,wxVtkBaseView*);
+ BBTK_DECLARE_INPUT(WidthLine,double);
+ BBTK_DECLARE_OUTPUT(ManualBaseModel,manualBaseModel*);
+ BBTK_PROCESS(Process);
+ void Process();
manualContourControler *_manContourControl_1;
manualContourModel *_mContourModel_1;
};
BBTK_BEGIN_DESCRIBE_BLACK_BOX(ContourControlPoints,bbtk::AtomicBlackBox);
- BBTK_NAME("ContourControlPoints");
- BBTK_AUTHOR("Info-Dev Creatis");
- BBTK_DESCRIPTION("No Description.");
- BBTK_CATEGORY("empty");
+ BBTK_NAME("ContourControlPoints");
+ BBTK_AUTHOR("Info-Dev Creatis");
+ BBTK_DESCRIPTION("No Description.");
+ BBTK_CATEGORY("empty");
- BBTK_INPUT(ContourControlPoints,Active,"Active (default false) ",bool,"");
- BBTK_INPUT(ContourControlPoints,Type,"(0 Default) 0=Spline, ... .",int,"");
- BBTK_INPUT(ContourControlPoints,OpenClose,"Open=true or Close=false contour (default false)",bool,"");
- BBTK_INPUT(ContourControlPoints,Visible,"Visible (default true)",bool,"");
- BBTK_INPUT(ContourControlPoints,wxVtkBaseView,"wxVtkBaseView",wxVtkBaseView*,"");
- BBTK_OUTPUT(ContourControlPoints,ManualBaseModel,"manualBaseModel",manualBaseModel*,"");
+ BBTK_INPUT(ContourControlPoints,Active,"Active (default false) ",bool,"");
+ BBTK_INPUT(ContourControlPoints,Type,"(0 Default) 0=Spline, ... .",int,"");
+ BBTK_INPUT(ContourControlPoints,OpenClose,"Open=true or Close=false contour (default false)",bool,"");
+ BBTK_INPUT(ContourControlPoints,Visible,"Visible (default true)",bool,"");
+ BBTK_INPUT(ContourControlPoints,wxVtkBaseView,"wxVtkBaseView",wxVtkBaseView*,"");
+ BBTK_INPUT(ContourControlPoints,WidthLine,"(1 Default) Line and Control points Width",double,"");
+ BBTK_OUTPUT(ContourControlPoints,ManualBaseModel,"manualBaseModel",manualBaseModel*,"");
BBTK_END_DESCRIBE_BLACK_BOX(ContourControlPoints);
//=====
--- /dev/null
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+#include "bbcreaMaracasVisuContourExtractDataBox.h"
+#include "bbcreaMaracasVisuPackage.h"
+
+#include "ContourExtractData.h"
+
+
+
+
+namespace bbcreaMaracasVisu
+{
+
+BBTK_ADD_BLACK_BOX_TO_PACKAGE(creaMaracasVisu,ContourExtractDataBox)
+BBTK_BLACK_BOX_IMPLEMENTATION(ContourExtractDataBox,bbtk::AtomicBlackBox);
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+void ContourExtractDataBox::Process()
+{
+
+// THE MAIN PROCESSING METHOD BODY
+// Here we simply set the input 'In' value to the output 'Out'
+// And print out the output value
+// INPUT/OUTPUT ACCESSORS ARE OF THE FORM :
+// void bbSet{Input|Output}NAME(const TYPE&)
+// const TYPE& bbGet{Input|Output}NAME() const
+// Where :
+// * NAME is the name of the input/output
+// (the one provided in the attribute 'name' of the tag 'input')
+// * TYPE is the C++ type of the input/output
+// (the one provided in the attribute 'type' of the tag 'input')
+ // bbSetOutputOut( bbGetInputIn() );
+ // std::cout << "Output value = " <<bbGetOutputOut() << std::endl;
+
+ ContourExtractData *contourextractdata = new ContourExtractData(true);
+ contourextractdata->SetImage( bbGetInputReferenceImage() );
+ if (bbGetInputRange().size()==2)
+ {
+ contourextractdata->SetScalarRange( bbGetInputRange()[0] , bbGetInputRange()[1] );
+ } // if Range
+
+ // _contourextractdata ->SetTypeOperation( typeContourGroup % 3 );
+ contourextractdata->InitVolumeStatistics();
+ std::vector<manualBaseModel*> lstManConMod;
+ lstManConMod.push_back( bbGetInputManualBaseModel() );
+ contourextractdata->SetLstManualContourModel( lstManConMod );
+
+ contourextractdata->ResetImageResult( bbGetInputZ() );
+ // for ( z=minZ ; z<=maxZ ; z++ )
+ // {
+ contourextractdata->SetZtoBeAnalys( bbGetInputZ() );
+ contourextractdata->CalculateImageResult();
+ // } // for
+
+
+ std::vector<double> LstValue;
+ std::vector<double> LstValuePosX;
+ std::vector<double> LstValuePosY;
+ std::vector<double> LstValuePosZ;
+ int numberOfPixels=0;
+ LstValue.clear();
+ LstValuePosX.clear();
+ LstValuePosY.clear();
+ LstValuePosZ.clear();
+
+ contourextractdata->GetValuesInsideCrown( &numberOfPixels,
+ &LstValue,
+ &LstValuePosX,
+ &LstValuePosY,
+ &LstValuePosZ);
+
+ // int grayRangeMin;
+ // int grayRangeMax;
+
+ int resultSize;
+ int resultGrayRangeCount;
+ double resultMin;
+ double resultMax;
+ double resultAverage;
+ double resultStandarDeviation;
+
+ // resultSize=numberOfPixels;
+
+ if (bbGetInputRange().size()==2)
+ {
+ // Statistics of each slice.
+ contourextractdata->Statistics( &LstValue,
+ bbGetInputRange()[0],
+ bbGetInputRange()[1],
+ &resultGrayRangeCount,
+ &resultSize,
+ &resultMin,
+ &resultMax,
+ &resultAverage,
+ &resultStandarDeviation);
+ bbSetOutputResultGrayRangeCount( (double)resultGrayRangeCount );
+ bbSetOutputResultSize( (double)resultSize );
+ bbSetOutputResultMin( resultMin );
+ bbSetOutputResultMax( resultMax );
+ bbSetOutputResultAverage( resultAverage );
+ bbSetOutputResultStandarDeviation( resultStandarDeviation );
+ } // if Range
+
+ vtkImageData *imageValues = contourextractdata->GetVtkImageValueResult();
+ vtkImageData *imageMask = contourextractdata->GetVtkImageMaskResult();
+ bbSetOutputValues( imageValues );
+ bbSetOutputMask( imageMask );
+ bbSetOutputNumberOfPixels( (double)numberOfPixels );
+ bbSetOutputLstValue( LstValue );
+ bbSetOutputLstValuePosX( LstValuePosX );
+ bbSetOutputLstValuePosX( LstValuePosY );
+ bbSetOutputLstValuePosX( LstValuePosZ );
+
+ // int vol_rCountRange;
+ // int vol_rsize;
+ // double vol_minValue;
+ // double vol_maxValue;
+ // double vol_average;
+ // double vol_standardeviation;
+
+ // _contourextractdata->GetVolumeStatistics(&vol_rCountRange, &vol_rsize,
+ // &vol_minValue, &vol_maxValue,
+ // &vol_average, &vol_standardeviation);
+}
+
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+void ContourExtractDataBox::bbUserSetDefaultValues()
+{
+// SET HERE THE DEFAULT INPUT/OUTPUT VALUES OF YOUR BOX
+// Here we initialize the input 'In' to 0
+ bbSetInputManualBaseModel(NULL);
+ bbSetInputReferenceImage(NULL);
+ bbSetInputZ(0);
+ std::vector<double> rangeMinMax;
+ rangeMinMax.push_back(-10000);
+ rangeMinMax.push_back(10000);
+ bbSetInputRange(rangeMinMax);
+ bbSetOutputMask(NULL);
+ bbSetOutputValues(NULL);
+
+ bbSetOutputResultGrayRangeCount( -1 );
+ bbSetOutputResultSize( -1 );
+ bbSetOutputResultMin( -1 );
+ bbSetOutputResultMax( -1 );
+ bbSetOutputResultAverage( -1 );
+ bbSetOutputResultStandarDeviation( -1 );
+
+}
+
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+void ContourExtractDataBox::bbUserInitializeProcessing()
+{
+// THE INITIALIZATION METHOD BODY :
+// Here does nothing
+// but this is where you should allocate the internal/output pointers
+// if any
+}
+
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+void ContourExtractDataBox::bbUserFinalizeProcessing()
+{
+// THE FINALIZATION METHOD BODY :
+// Here does nothing
+// but this is where you should desallocate the internal/output pointers
+// if any
+}
+
+}// EO namespace bbcreaMaracasVisu
+
+
--- /dev/null
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+#ifndef __bbcreaMaracasVisuContourExtractDataBox_h_INCLUDED__
+#define __bbcreaMaracasVisuContourExtractDataBox_h_INCLUDED__
+
+#include "bbcreaMaracasVisu_EXPORT.h"
+#include "bbtkAtomicBlackBox.h"
+#include "iostream"
+
+#include <vtkImageData.h>
+#include "manualContourModel.h"
+
+
+namespace bbcreaMaracasVisu
+{
+
+class bbcreaMaracasVisu_EXPORT ContourExtractDataBox
+ :
+ public bbtk::AtomicBlackBox
+{
+ BBTK_BLACK_BOX_INTERFACE(ContourExtractDataBox,bbtk::AtomicBlackBox);
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+ BBTK_DECLARE_INPUT(ReferenceImage , vtkImageData*);
+ BBTK_DECLARE_INPUT(ManualBaseModel , manualBaseModel*);
+ BBTK_DECLARE_INPUT(Z , int);
+ BBTK_DECLARE_INPUT(Range , std::vector<double>);
+ BBTK_DECLARE_OUTPUT(Mask , vtkImageData*);
+ BBTK_DECLARE_OUTPUT(Values , vtkImageData*);
+
+ BBTK_DECLARE_OUTPUT(NumberOfPixels , double );
+ BBTK_DECLARE_OUTPUT(LstValue , std::vector<double> );
+ BBTK_DECLARE_OUTPUT(LstValuePosX , std::vector<double> );
+ BBTK_DECLARE_OUTPUT(LstValuePosY , std::vector<double> );
+ BBTK_DECLARE_OUTPUT(LstValuePosZ , std::vector<double> );
+
+ BBTK_DECLARE_OUTPUT(ResultGrayRangeCount , double );
+ BBTK_DECLARE_OUTPUT(ResultSize , double );
+ BBTK_DECLARE_OUTPUT(ResultMin , double );
+ BBTK_DECLARE_OUTPUT(ResultMax , double );
+ BBTK_DECLARE_OUTPUT(ResultAverage , double );
+ BBTK_DECLARE_OUTPUT(ResultStandarDeviation , double );
+ BBTK_PROCESS(Process);
+ void Process();
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+};
+
+BBTK_BEGIN_DESCRIBE_BLACK_BOX(ContourExtractDataBox,bbtk::AtomicBlackBox);
+ BBTK_NAME("ContourExtractDataBox");
+ BBTK_AUTHOR("Info-Dev");
+ BBTK_DESCRIPTION("No Description.");
+ BBTK_CATEGORY("empty");
+ BBTK_INPUT(ContourExtractDataBox,ReferenceImage,"Reference Image",vtkImageData*,"");
+ BBTK_INPUT(ContourExtractDataBox,ManualBaseModel,"ManualBaseModel",manualBaseModel*,"");
+ BBTK_INPUT(ContourExtractDataBox,Z,"(0 default) slice Z to be extracted",int,"");
+ BBTK_INPUT(ContourExtractDataBox,Range,"([-10000 10000] Gray level range [min max]",std::vector<double>,"");
+
+ BBTK_OUTPUT(ContourExtractDataBox,Mask,"Mask image",vtkImageData*,"");
+ BBTK_OUTPUT(ContourExtractDataBox,Values,"Values image",vtkImageData*,"");
+ BBTK_OUTPUT(ContourExtractDataBox,NumberOfPixels,"Number of pixels (this value can be big)",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,LstValue,"List of values inside the mask and in the range",std::vector<double>,"");
+ BBTK_OUTPUT(ContourExtractDataBox,LstValuePosX,"List of px of the values inside the mask and in the range",std::vector<double>,"");
+ BBTK_OUTPUT(ContourExtractDataBox,LstValuePosY,"List of py of the values inside the mask and in the range",std::vector<double>,"");
+ BBTK_OUTPUT(ContourExtractDataBox,LstValuePosZ,"List of pz of the values inside the mask and in the range",std::vector<double>,"");
+
+ BBTK_OUTPUT(ContourExtractDataBox,ResultGrayRangeCount,"ResultGrayRangeCount",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,ResultSize,"ResultSize",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,ResultMin,"ResultMin",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,ResultMax,"ResultMax",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,ResultAverage,"ResultAverage",double,"");
+ BBTK_OUTPUT(ContourExtractDataBox,ResultStandarDeviation,"ResultStandarDeviation",double,"");
+
+BBTK_END_DESCRIBE_BLACK_BOX(ContourExtractDataBox);
+//=====
+// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
+//=====
+}
+// EO namespace bbcreaMaracasVisu
+
+#endif // __bbcreaMaracasVisuContourExtractDataBox_h_INCLUDED__
+
//----------------------------------------------------------------------
void ContourExtractData::SetZtoBeAnalys( int z )
{
- this->zImage = z;
+ this->zImage = z;
}
//------------------------------------------------------------------------
void ContourExtractData::SetLstManualContourModel( std::vector<manualBaseModel*> lstManConMod)
{
- this->lstManConMod = lstManConMod;
+ this->lstManConMod = lstManConMod;
}
-
-
//------------------------------------------------------------------------
void ContourExtractData::GetMinMaxPoint(int *minPoint,
int *maxPoint,
manualViewPoint(wxVtkBaseView *wxvtkbaseview);
virtual ~manualViewPoint();
- virtual manualViewPoint * Clone();
- void CopyAttributesTo( manualViewPoint *cloneObject );
+ virtual manualViewPoint * Clone();
+ void CopyAttributesTo( manualViewPoint *cloneObject );
void SetSelected(bool selected);
void SetPosibleSelected(bool posibleSelected);
bool GetSelected();
git://git.creatis.insa-lyon.fr / creaMaracasVisu.git / commitdiff