+++ /dev/null
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-#ifndef __bbcreaVtkFromVtk4DToItk4D_h_INCLUDED__
-#define __bbcreaVtkFromVtk4DToItk4D_h_INCLUDED__
-#include "bbcreaVtk_EXPORT.h"
-#include "bbtkAtomicBlackBox.h"
-#include "iostream"
-#include "vtkImageData.h"
-#include <vector>
-#include "itkImage.h"
-
-namespace bbcreaVtk
-{
-
-class bbcreaVtk_EXPORT FromVtk4DToItk4D
- :
- public bbtk::AtomicBlackBox
-{
- BBTK_BLACK_BOX_INTERFACE(FromVtk4DToItk4D,bbtk::AtomicBlackBox);
-
- BBTK_DECLARE_INPUT(In,std::vector<vtkImageData*> );
- //BBTK_DECLARE_OUTPUT(Out,std::vector<itk::Image< unsigned char > >);
- BBTK_PROCESS(Process);
- void Process();
-
-};
-
-BBTK_BEGIN_DESCRIBE_BLACK_BOX(FromVtk4DToItk4D,bbtk::AtomicBlackBox);
-BBTK_NAME("FromVtk4DToItk4D");
-BBTK_AUTHOR("Carlos Torres");
-BBTK_DESCRIPTION("carlos.torres@creatis.insa-lyon.fr -");
-BBTK_CATEGORY("empty");
-BBTK_INPUT(FromVtk4DToItk4D,In,"Vtk image 4D",std::vector<vtkImageData*>,"");
-//BBTK_OUTPUT(FromVtk4DToItk4D,Out,"Itk image 4D",std::vector<itk::Image< unsigned char > >,"");
-BBTK_END_DESCRIBE_BLACK_BOX(FromVtk4DToItk4D);
-
-}
-// EO namespace bbcreaVtk
-
-#endif // __bbcreaVtkFromVtk4DToItk4D_h_INCLUDED__
-
+++ /dev/null
-/*
-# ---------------------------------------------------------------------
-#
-# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
-# pour la Sante)
-# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
-# Previous Authors : Laurent Guigues, Jean-Pierre Roux
-# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
-#
-# This software is governed by the CeCILL-B license under French law and
-# abiding by the rules of distribution of free software. You can use,
-# modify and/ or redistribute the software under the terms of the CeCILL-B
-# license as circulated by CEA, CNRS and INRIA at the following URL
-# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-# or in the file LICENSE.txt.
-#
-# As a counterpart to the access to the source code and rights to copy,
-# modify and redistribute granted by the license, users are provided only
-# with a limited warranty and the software's author, the holder of the
-# economic rights, and the successive licensors have only limited
-# liability.
-#
-# The fact that you are presently reading this means that you have had
-# knowledge of the CeCILL-B license and that you accept its terms.
-# ------------------------------------------------------------------------
-*/
-
-#include "creaVtkFromVtk4DToItk4D.h"
-#include "itkImage.h"
-#include "itkImageLinearConstIteratorWithIndex.h"
-#include "itkImageRegionConstIterator.h"
-#include "itkImageRegionIterator.h"
-#include "itkImageFileReader.h"
-#include <vector>
-
-template <class TImage>
-creaVtkFromVtk4DToItk4D<TImage>::creaVtkFromVtk4DToItk4D()
-{
-}
-
-template <class TImage>
-creaVtkFromVtk4DToItk4D<TImage>::~creaVtkFromVtk4DToItk4D()
-{
-}
-
-template <class TImage>
-void creaVtkFromVtk4DToItk4D<TImage>::SetImage4D(TImage *image)
-{
- _image4D = image;
-}
-
-template <class TImage>
-void creaVtkFromVtk4DToItk4D<TImage>::SetImage4Dvtk(std::vector<vtkImageData*> image)
-{
- image4Dvtk = image;
-}
-
-template <class TImage>
-std::vector<itk::Image< unsigned char > > creaVtkFromVtk4DToItk4D<TImage>::Process()
-{
- /*
- int dir;
- double pv[65];
- int count = 0;
- typedef itk::ImageLinearConstIteratorWithIndex< TImage > ConstIteratorType;
- const unsigned int Dimension = 4;
- typedef unsigned char PixelType;
- typedef itk::Image< PixelType, Dimension > ImageType;
-
- ConstIteratorType inputIt( _image4D, inputRegion );
- inputIt.SetDirection(3);
- inputIt.GoToBegin();
-
- ImageType::RegionType outputRegion;
- ImageType::RegionType::IndexType outputStart;
- outputStart[0] = 0;
- outputStart[1] = 0;
- outputRegion.SetSize( size );
- outputRegion.SetIndex( outputStart );
-
- while( !inputIt.IsAtEnd() )
- {
- inputIt.GoToBeginOfLine();
- count = 0;
- while( !inputIt.IsAtEndOfLine() )
- {
- pv[count] = inputIt.Get();
- ++inputIt;
- ++count;
- }
- }
-*/
- const unsigned int Dimension = 4;
- typedef unsigned char PixelType;
- typedef itk::Image< PixelType, Dimension > ImageType;
- typedef itk::ImageRegionConstIterator< ImageType > ConstIteratorType;
- typedef itk::ImageRegionIterator< ImageType> IteratorType;
-
- //typedef itk::ImageFileReader< ImageType > ReaderType;
- //typedef itk::ImageFileWriter< ImageType > WriterType;
-
- ImageType::RegionType inputRegion;
- ImageType::RegionType::IndexType inputStart;
- ImageType::RegionType::SizeType size;
- inputStart[0] = ::atoi( "20" );
- inputStart[1] = ::atoi( "70" );
- size[0] = ::atoi( "210" );
- size[1] = ::atoi( "140" );
- inputRegion.SetSize( size );
- inputRegion.SetIndex( inputStart );
-
- ImageType::RegionType outputRegion;
- ImageType::RegionType::IndexType outputStart;
- outputStart[0] = 0;
- outputStart[1] = 0;
- outputStart[2] = 0;
- outputStart[3] = 0;
- outputRegion.SetSize( size );
- outputRegion.SetIndex( outputStart );
-
- /*
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName( "foo.vtk" );
- try
- {
- reader->Update();
- }
- catch ( itk::ExceptionObject &err)
- {
- std::cerr << "ExceptionObject caught !" << std::endl;
- std::cerr << err << std::endl;
- return -1;
- }
-
- if ( ! reader->GetOutput()->GetRequestedRegion().IsInside( inputRegion ) )
- {
- std::cerr << "Error" << std::endl;
- std::cerr << "The region " << inputRegion << "is not contained within the input image region "
- << reader->GetOutput()->GetRequestedRegion() << std::endl;
- return -1;
- }*/
- std::vector<ImageType::Pointer> outputImage4D;
- for(int k = 0 ; k < image4Dvtk.size() ; k++){
- ImageType::Pointer outputImage = ImageType::New();
- outputImage->SetRegions( outputRegion );
- const ImageType::SpacingType& spacing = image4Dvtk[k]->GetSpacing();
- const ImageType::PointType& inputOrigin = image4Dvtk[k]->GetOrigin();
- double outputOrigin[ Dimension ];
- for(unsigned int i=0; i< Dimension; i++)
- {
- outputOrigin[i] = inputOrigin[i] + spacing[i] * inputStart[i];
- }
- outputImage->SetSpacing( spacing );
- outputImage->SetOrigin( outputOrigin );
- outputImage->Allocate();
-
- ConstIteratorType inputIt( image4Dvtk[k], inputRegion );
- IteratorType outputIt( outputImage, outputRegion );
- inputIt.GoToBegin();
- outputIt.GoToBegin();
-
- while( !outputIt.IsAtEnd() )
- {
- outputIt.Set( inputIt.Get() );
- ++inputIt;
- ++outputIt;
- }
- outputImage4D[k]=outputImage;
- }
- return outputImage4D;
-}
-//---------------------------------------------
-//Method template
-//---------------------------------------------
-/*
-void creaVtkFromVtk4DToItk4D::FunctionName(int& parameterA)
-{
- parameterA = 2 * parameterA;
- return;
-}
-*/
+++ /dev/null
-/*
-# ---------------------------------------------------------------------
-#
-# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
-# pour la Sante)
-# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
-# Previous Authors : Laurent Guigues, Jean-Pierre Roux
-# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
-#
-# This software is governed by the CeCILL-B license under French law and
-# abiding by the rules of distribution of free software. You can use,
-# modify and/ or redistribute the software under the terms of the CeCILL-B
-# license as circulated by CEA, CNRS and INRIA at the following URL
-# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-# or in the file LICENSE.txt.
-#
-# As a counterpart to the access to the source code and rights to copy,
-# modify and redistribute granted by the license, users are provided only
-# with a limited warranty and the software's author, the holder of the
-# economic rights, and the successive licensors have only limited
-# liability.
-#
-# The fact that you are presently reading this means that you have had
-# knowledge of the CeCILL-B license and that you accept its terms.
-# ------------------------------------------------------------------------
-*/
-
-#ifndef _CREAVTKFROMVTK4DTOITK4D_H_
-#define _CREAVTKFROMVTK4DTOITK4D_H_
-#include "vtkImageData.h"
-#include <vector>
-#include "itkImage.h"
-template <class TImage>
-class creaVtkFromVtk4DToItk4D
-{
-public :
- creaVtkFromVtk4DToItk4D();
- ~creaVtkFromVtk4DToItk4D();
- void SetImage4D(TImage *image);
- void SetImage4Dvtk(std::vector<vtkImageData*> image);
- //std::vector<itk::Image<unsigned char> > Process();
-
-protected:
-
-private:
- TImage* _image4D;
- std::vector<vtkImageData*> image4Dvtk;
-};
-
-//-end of _CREAVTKFROMVTK4DTOITK4D_H_------------------------------------------------------
-#endif
git://git.creatis.insa-lyon.fr / creaVtk.git / commitdiff