]> Creatis software - clitk.git/commitdiff
more root merger
authorPierre Gueth <pierre.gueth@creatis.insa-lyon.fr>
Thu, 7 Feb 2013 13:17:09 +0000 (14:17 +0100)
committerDavid Sarrut <david.sarrut@creatis.insa-lyon.fr>
Fri, 26 Jul 2013 06:32:31 +0000 (08:32 +0200)
tests_dav/clitkMergeRootFiles.cxx

index 5b62d84e7608235360b0459f96a66ae9c23dbce2..957a8ed8eac06a48adb5796ef6ad608bd6e270e1 100644 (file)
@@ -17,6 +17,7 @@
 #include <TKey.h>
 #include <TFileMerger.h>
 #include <TTree.h>
+#include <TChain.h>
 #include <TH1.h>
 #include <TH2.h>
 #include <iostream>
@@ -29,6 +30,43 @@ typedef std::list<std::string> Strings;
 typedef std::list<TFile*> Handles;
 typedef std::set<std::string> StringsSet;
 
+void mergeSingleTree(TChain* chain, TFile* output_handle, const std::string& tree_name)
+{
+       assert(chain->FindBranch("runID"));
+       assert(chain->FindBranch("eventID"));
+       assert(chain->FindBranch("time"));
+
+       int eventID = -1;
+       int runID = -1;
+       double time = -1;
+
+       chain->SetBranchAddress("eventID",&eventID);
+       chain->SetBranchAddress("runID",&runID);
+       chain->SetBranchAddress("time",&time);
+
+       output_handle->cd();
+       TTree* output_tree = chain->CloneTree(0);
+
+       const long int nentries = chain->GetEntries();
+       for (long int kk=0; kk<nentries; kk++)
+       {
+               chain->GetEntry(kk);
+               //cout << kk << "/" << chain->GetTreeNumber() << endl;
+               output_tree->Fill();
+       }
+
+       output_tree->Write();
+       delete output_tree;
+}
+
+void mergeGateTree(TChain* chain, TFile* output_handle, const std::string& tree_name)
+{
+}
+
+void mergeCoinTree(TChain* chain, TFile* output_handle, const std::string& tree_name)
+{
+}
+
 void mergePetRoot(const Strings& input_filenames, const std::string& output_filename)
 {
        TFile* output_handle = TFile::Open(output_filename.c_str(),"RECREATE");
@@ -50,21 +88,40 @@ void mergePetRoot(const Strings& input_filenames, const std::string& output_file
                        const bool is_h1 = key->ReadObj()->InheritsFrom("TH1");
                        const bool is_h2 = key->ReadObj()->InheritsFrom("TH2");
                        if (is_tree) tree_names.insert(name);
-                       if (is_h1) h1_names.insert(name);
+                       if (is_h1) { h1_names.insert(name); cout << name << "## " << static_cast<TH1D*>(key->ReadObj())->GetMean() << endl; }
                        if (is_h2) h2_names.insert(name);
                }
 
                input_handles.push_back(handle);
        }
 
-       cout << "found " << tree_names.size() << " tree "<< h1_names.size() << " histo1d " << h2_names.size() << " histo2d" << endl;
-
-
        for (Handles::const_iterator iter=input_handles.begin(); iter!=input_handles.end(); iter++)
        {
                (*iter)->Close();
                delete *iter;
        }
+
+       cout << "found " << tree_names.size() << " tree "<< h1_names.size() << " histo1d " << h2_names.size() << " histo2d" << endl;
+
+       {
+               cout << "merging trees" << endl;
+               for (StringsSet::const_iterator iter_tree=tree_names.begin(); iter_tree!=tree_names.end(); iter_tree++)
+               {
+                       cout << "  tree " << *iter_tree;
+                       TChain* chain = new TChain(iter_tree->c_str());
+                       for (Strings::const_iterator iter_filename=input_filenames.begin(); iter_filename!=input_filenames.end(); iter_filename++)
+                               chain->Add(iter_filename->c_str());
+                       cout << " nentries " << chain->GetEntries() << endl;
+
+                       if ((*iter_tree) == "Singles" || (*iter_tree) == "Hits") mergeSingleTree(chain,output_handle,*iter_tree);
+                       if ((*iter_tree) == "Gate") mergeGateTree(chain,output_handle,*iter_tree);
+                       if ((*iter_tree) == "Coincidences") mergeCoinTree(chain,output_handle,*iter_tree);
+
+                       delete chain;
+               }
+       }
+
+
 }