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Creatis software - clitk.git/log
David Sarrut [Fri, 4 Nov 2011 09:26:11 +0000 (10:26 +0100)]
Second version of rel pos analyzer
David Sarrut [Fri, 4 Nov 2011 09:25:41 +0000 (10:25 +0100)]
Remove old stuff
David Sarrut [Fri, 4 Nov 2011 09:25:29 +0000 (10:25 +0100)]
New ComputeOptimalThreshold
David Sarrut [Fri, 4 Nov 2011 09:25:11 +0000 (10:25 +0100)]
Correct angle units
David Sarrut [Fri, 4 Nov 2011 09:24:59 +0000 (10:24 +0100)]
To be consistant, crop strictly above (not above or equal)
David Sarrut [Fri, 4 Nov 2011 09:24:20 +0000 (10:24 +0100)]
Second version of databse of rel pos
David Sarrut [Fri, 4 Nov 2011 09:23:03 +0000 (10:23 +0100)]
First version of rel pos database builder
David Sarrut [Fri, 4 Nov 2011 09:22:45 +0000 (10:22 +0100)]
First version of the builder of relpos database
David Sarrut [Fri, 4 Nov 2011 09:21:58 +0000 (10:21 +0100)]
Explicit units for Angle (rad or deg)
David Sarrut [Thu, 27 Oct 2011 13:57:03 +0000 (15:57 +0200)]
Second version of clitkRelativePositionAnalyzer
David Sarrut [Thu, 27 Oct 2011 13:56:40 +0000 (15:56 +0200)]
Add afdb_path option
David Sarrut [Thu, 27 Oct 2011 13:56:24 +0000 (15:56 +0200)]
Add --afdb_path option
David Sarrut [Thu, 27 Oct 2011 13:56:14 +0000 (15:56 +0200)]
Add --afdb_path option
David Sarrut [Thu, 27 Oct 2011 13:55:46 +0000 (15:55 +0200)]
Add path when loading an image
David Sarrut [Thu, 27 Oct 2011 13:55:22 +0000 (15:55 +0200)]
First version of the clitkRelativePositionDataBase struct
David Sarrut [Thu, 27 Oct 2011 13:54:37 +0000 (15:54 +0200)]
Add the tool clitkRelativePositionDataBaseAnalyzer
David Sarrut [Thu, 27 Oct 2011 13:54:16 +0000 (15:54 +0200)]
Add first version of clitkRelativePositionDataBaseAnalyzer
David Sarrut [Thu, 27 Oct 2011 13:52:29 +0000 (15:52 +0200)]
Second version of RelativePositionAnalyzer
David Sarrut [Thu, 27 Oct 2011 13:51:52 +0000 (15:51 +0200)]
Add New(), GetValueTag and Path (to search for image)
David Sarrut [Thu, 27 Oct 2011 13:50:46 +0000 (15:50 +0200)]
Cosmetic
David Sarrut [Thu, 27 Oct 2011 13:49:38 +0000 (15:49 +0200)]
Change comments
David Sarrut [Thu, 27 Oct 2011 13:49:01 +0000 (15:49 +0200)]
Add MapToVec (first/second) functions.
David Sarrut [Mon, 24 Oct 2011 06:31:03 +0000 (08:31 +0200)]
Add ComputeBBUnion
David Sarrut [Mon, 24 Oct 2011 06:30:47 +0000 (08:30 +0200)]
Add ResizeImageLike with region or bb
David Sarrut [Mon, 24 Oct 2011 06:29:29 +0000 (08:29 +0200)]
Add SliceBySliceRelativePosition with angles
David Sarrut [Mon, 24 Oct 2011 06:29:02 +0000 (08:29 +0200)]
Add code for computing FuzzyMap only (without threshold)
David Sarrut [Mon, 24 Oct 2011 06:28:32 +0000 (08:28 +0200)]
Add FloatSliceType
David Sarrut [Mon, 24 Oct 2011 06:28:17 +0000 (08:28 +0200)]
Correct but when using LimitsWithTrachea (not taken into account)
David Sarrut [Mon, 24 Oct 2011 06:27:19 +0000 (08:27 +0200)]
First version of RelativePositionAnalyzer
David Sarrut [Mon, 24 Oct 2011 06:26:24 +0000 (08:26 +0200)]
Add AFDB support
David Sarrut [Mon, 24 Oct 2011 06:26:13 +0000 (08:26 +0200)]
Add AFDB support
David Sarrut [Mon, 24 Oct 2011 06:25:59 +0000 (08:25 +0200)]
Remove comments
David Sarrut [Mon, 24 Oct 2011 06:25:36 +0000 (08:25 +0200)]
Correct the way to set angles
David Sarrut [Mon, 24 Oct 2011 06:24:08 +0000 (08:24 +0200)]
First version of clitkLabelImageOverlapMeasure
David Sarrut [Mon, 24 Oct 2011 06:23:31 +0000 (08:23 +0200)]
Add GetAngle
David Sarrut [Mon, 24 Oct 2011 05:25:11 +0000 (07:25 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
David Sarrut [Mon, 24 Oct 2011 05:25:07 +0000 (07:25 +0200)]
Add clitkLabelImageOverlapMeasure and clitkRelativePositionAnalyzer
Vivien Delmon [Fri, 21 Oct 2011 11:55:30 +0000 (13:55 +0200)]
Check VTK_VERSION with a valid syntax
Vivien Delmon [Fri, 21 Oct 2011 11:37:48 +0000 (13:37 +0200)]
Don't use VTK_LIBRAARIES with old VTK versions
Vivien Delmon [Fri, 21 Oct 2011 11:36:16 +0000 (13:36 +0200)]
Remove old scripts from CMakeLists
- Remove installation of scripts thathas been removed of the repository.
David Sarrut [Thu, 20 Oct 2011 05:26:14 +0000 (07:26 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
David Sarrut [Wed, 19 Oct 2011 13:14:07 +0000 (15:14 +0200)]
Change include (clitkBoundingBoxUtils)
David Sarrut [Wed, 19 Oct 2011 13:12:12 +0000 (15:12 +0200)]
Remove ResizeImageLike (put in CropLikeImageFilter) and BoundingBox (put in clitkBoundingBoxUtils)
David Sarrut [Wed, 19 Oct 2011 13:06:20 +0000 (15:06 +0200)]
Utils for bounding box calculation (formerly in clitkSegmentationUtils)
David Sarrut [Wed, 19 Oct 2011 13:03:39 +0000 (15:03 +0200)]
Add CropLikeImageFilter include
David Sarrut [Wed, 19 Oct 2011 13:01:45 +0000 (15:01 +0200)]
Add a convenient function
David Sarrut [Wed, 19 Oct 2011 11:03:44 +0000 (13:03 +0200)]
Add first version of RelativePositionAnalyzer
David Sarrut [Wed, 19 Oct 2011 11:03:09 +0000 (13:03 +0200)]
Set the inverse orientation flag after the addorientation
David Sarrut [Wed, 19 Oct 2011 11:02:39 +0000 (13:02 +0200)]
Correct the #define
David Sarrut [Wed, 19 Oct 2011 11:02:17 +0000 (13:02 +0200)]
Remove debug
David Sarrut [Wed, 19 Oct 2011 11:01:59 +0000 (13:01 +0200)]
Remove unused files
David Sarrut [Wed, 19 Oct 2011 11:01:14 +0000 (13:01 +0200)]
Add one slice for the S1RL support
David Sarrut [Wed, 19 Oct 2011 11:00:43 +0000 (13:00 +0200)]
Write dilated Aorta in afdb
Vivien Delmon [Wed, 19 Oct 2011 09:28:40 +0000 (11:28 +0200)]
Add clitkMeshToBinaryImage tool
- Add clitkMeshToBinaryImage tool based on the filter of the same name.
Vivien Delmon [Wed, 19 Oct 2011 09:25:51 +0000 (11:25 +0200)]
Add Extrude option to clitkMeshToBinaryImageFilter
- Set default value to true for backward compatibility
Vivien Delmon [Wed, 19 Oct 2011 09:25:05 +0000 (11:25 +0200)]
Add missing include
David Sarrut [Tue, 18 Oct 2011 09:51:13 +0000 (11:51 +0200)]
Read CricoidCartilag image or Point position (simpler)
David Sarrut [Tue, 18 Oct 2011 09:50:51 +0000 (11:50 +0200)]
Add VerboseTracking for debug
David Sarrut [Tue, 18 Oct 2011 09:50:32 +0000 (11:50 +0200)]
Add VerboseTracking for debug
David Sarrut [Tue, 18 Oct 2011 09:50:15 +0000 (11:50 +0200)]
Protect 'crop' if given parameters are larger than image size
David Sarrut [Tue, 18 Oct 2011 09:49:47 +0000 (11:49 +0200)]
Remove debug
David Sarrut [Tue, 18 Oct 2011 09:49:35 +0000 (11:49 +0200)]
Add info in the command line help
David Sarrut [Tue, 18 Oct 2011 05:54:59 +0000 (07:54 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Romulo Pinho [Mon, 17 Oct 2011 15:21:38 +0000 (17:21 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Romulo Pinho [Mon, 17 Oct 2011 15:20:46 +0000 (17:20 +0200)]
calculation of motion amplitude itself...
- that is, (max - min) over time
David Sarrut [Mon, 17 Oct 2011 11:48:53 +0000 (13:48 +0200)]
Comment temporary stuf (station 7,8)
David Sarrut [Mon, 17 Oct 2011 08:43:40 +0000 (10:43 +0200)]
Order stations, remove debug, correct structures names
David Sarrut [Mon, 17 Oct 2011 08:43:10 +0000 (10:43 +0200)]
Change mhd to mha
David Sarrut [Mon, 17 Oct 2011 08:40:49 +0000 (10:40 +0200)]
Remove debug
David Sarrut [Mon, 17 Oct 2011 08:40:27 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:40:20 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:40:11 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:39:25 +0000 (10:39 +0200)]
Remove debug
David Sarrut [Mon, 17 Oct 2011 08:39:13 +0000 (10:39 +0200)]
Change mhd to mha
David Sarrut [Mon, 17 Oct 2011 08:38:59 +0000 (10:38 +0200)]
Enhance the warning output
Gauthier Bouilhol [Wed, 12 Oct 2011 11:21:27 +0000 (13:21 +0200)]
create_sequence.sh and dcm_sort_by_field.sh removed
Gauthier Bouilhol [Tue, 11 Oct 2011 14:49:31 +0000 (16:49 +0200)]
clitk header added
dbcache [Tue, 11 Oct 2011 14:38:04 +0000 (16:38 +0200)]
correction in motion mask script
Gauthier Bouilhol [Tue, 11 Oct 2011 14:30:15 +0000 (16:30 +0200)]
now compatible with GDCM 1.x and GDCM 2.x
dbcache [Tue, 11 Oct 2011 12:18:12 +0000 (14:18 +0200)]
correction in motion mask script
Vivien Delmon [Tue, 11 Oct 2011 10:05:29 +0000 (12:05 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Vivien Delmon [Tue, 11 Oct 2011 09:44:37 +0000 (11:44 +0200)]
Make clitkDicomWave2Text compile with itk4
- Protect the code with GDCM_MAJOR_VERSION < 2 and print an error
message when compiled with 2.x GDCM version.
Romulo Pinho [Tue, 11 Oct 2011 09:35:42 +0000 (11:35 +0200)]
removing stray characters from beginning of files
- patch sent by Joël Schaerer
Romulo Pinho [Tue, 11 Oct 2011 08:09:44 +0000 (10:09 +0200)]
Compilation error related to GDCM-2
David Sarrut [Mon, 10 Oct 2011 12:16:20 +0000 (14:16 +0200)]
Remove debug and correct slice position for CaudlaMarginOf BV
David Sarrut [Mon, 10 Oct 2011 12:15:44 +0000 (14:15 +0200)]
Add comment (future changes todo)
David Sarrut [Mon, 10 Oct 2011 12:15:31 +0000 (14:15 +0200)]
Change comments
David Sarrut [Mon, 10 Oct 2011 07:55:57 +0000 (09:55 +0200)]
SaveScreenshotAllSlices : filenames correction and correct update to force the display of ROI.
David Sarrut [Mon, 10 Oct 2011 07:04:51 +0000 (09:04 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Gauthier Bouilhol [Fri, 7 Oct 2011 12:26:33 +0000 (14:26 +0200)]
clitkDicomWave2Text tool added
Romulo Pinho [Fri, 7 Oct 2011 09:45:52 +0000 (11:45 +0200)]
install of motion_amplitude script
Romulo Pinho [Fri, 7 Oct 2011 09:41:51 +0000 (11:41 +0200)]
calculation of an RTstruct's motion amplitude
Romulo Pinho [Thu, 6 Oct 2011 15:17:35 +0000 (17:17 +0200)]
clitkImageStatistics - small robustness issue
Romulo Pinho [Thu, 6 Oct 2011 15:03:06 +0000 (17:03 +0200)]
clitkImageStatistics - support for 4D images
- label mask may also be (n-1)D
David Sarrut [Wed, 5 Oct 2011 09:05:59 +0000 (11:05 +0200)]
Add an option to the screenshots menu to save all slices (with ROI and transparency)
David Sarrut [Wed, 5 Oct 2011 09:05:27 +0000 (11:05 +0200)]
Remove debug and check that options are correct
David Sarrut [Wed, 5 Oct 2011 09:05:07 +0000 (11:05 +0200)]
Add station 5 and 6
David Sarrut [Wed, 5 Oct 2011 09:04:42 +0000 (11:04 +0200)]
Add Station 5 and 6
David Sarrut [Wed, 5 Oct 2011 09:04:29 +0000 (11:04 +0200)]
Correct bug in support for 4RL
David Sarrut [Wed, 5 Oct 2011 09:04:11 +0000 (11:04 +0200)]
Station 4RL is not ok
git://git.creatis.insa-lyon.fr / clitk.git / log