1 # CMakeLists for Testing purpose
2 # Cxx file that need a file to run should be place aproprietly
4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
8 # add test that does not require data:
9 # They usally return if no argument is given
21 TestDicomDirElement.cxx
26 # add tests that require data
28 SET(TEST_SOURCES ${TEST_SOURCES}
31 TestLoadAllDocumentsNoPrivNoSeq.cxx # includes generated gdcmDataImages.h
32 TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
33 #TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
34 TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
35 TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
36 #TestCopyDicom.cxx # includes generated gdcmDataImages.h
37 # TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
41 TestDicomDir.cxx # require DICOMDIR
42 TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
43 TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
44 TestSerieHelper.cxx # uses gdcmData as a default root directory
46 # add test that require VTK:
48 IF("${VTK_MAJOR_VERSION}" LESS 4)
49 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !")
50 ELSE("${VTK_MAJOR_VERSION}" LESS 4)
51 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
52 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
53 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
54 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
55 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
56 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
57 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
58 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
59 # Include the VTK library since we know this is going to work
60 INCLUDE(${VTK_USE_FILE})
63 ${GDCM_SOURCE_DIR}/vtk
65 SET(TEST_SOURCES ${TEST_SOURCES}
71 ENDIF("${VTK_MAJOR_VERSION}" LESS 4)
73 ENDIF (GDCM_DATA_ROOT)
79 ${GDCM_SOURCE_DIR}/src
83 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
84 ADD_EXECUTABLE(gdcmTests ${Tests})
87 TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
90 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
93 SET (TestsToRun ${Tests})
94 REMOVE (TestsToRun gdcmTests.cxx)
96 # Loop over files and create executables
97 FOREACH(file ${TEST_SOURCES})
98 GET_FILENAME_COMPONENT(name ${file} NAME_WE)
99 ADD_TEST(${name} ${GDCM_TESTS} ${name})
100 ENDFOREACH(file ${TEST_SOURCES})
102 #-----------------------------------------------------------------------------
104 # We need to test the reading of all dicom images in the gdcmData directory
105 # First parse this directory and extract all images
107 FILE(GLOB GDCM_DATA_IMAGES_GLOB
108 "${GDCM_DATA_ROOT}/*.acr"
109 "${GDCM_DATA_ROOT}/*.dcm"
110 "${GDCM_DATA_ROOT}/*.nema"
111 "${GDCM_DATA_ROOT}/*.ima"
114 # Black list of images known to break lots of readers (efilm, xmedcon ...):
116 # Multiframe Papyrus format image
117 # Just to remember this format exists, and is gdcm::File compliant
118 # (NOT gdcm::FileHelper ...)
119 # any contribution is welcome
120 "PET-cardio-Multiframe-Papyrus.dcm"
121 # From David Clunie's Compresion Dataset
122 "D_CLUNIE_CT1_JLSN.dcm"
123 "D_CLUNIE_CT1_JLSL.dcm"
124 #Not a Dicom Image, but a RT Object
125 "RS2.16.124.113534.2.3.5.0.120040728.21342.353.12747_anonimized.dcm"
127 "ETIAM_video_002.dcm"
128 #Something stupid occured in the code for LibIDO images.
129 #I Black list them for a while. JP
130 "gdcm-ACR-LibIDO.acr"
131 "LIBIDO-24-ACR_NEMA-Rectangle.dcm"
132 #16 Bits per pixel images with LUT 16 Bits.
133 #I wait to be 100% sure before releasing them. JP
136 # Jasper cannot handle this image, only kakadu so far, unless you patch jasper
137 # but then it breaks other images...
138 "CT_Phillips_JPEG2K_Decompr_Problem.dcm"
142 # I probabely messed up smething with the .png, .tst of
143 # the images I recently added to the Test Suite
144 # I Black list them, until I find where is the pb.
145 "US-RGB-8-esopecho.dcm"
146 "MR_Philips_Intera_No_PrivateSequenceImplicitVR.dcm"
147 "MR_Philips_Intera_PrivateSequenceImplicitVR.dcm"
148 "MR_SIEMENS_forceLoad29-1010_29-1020.dcm"
149 # An element contains a value of 4, but no data follows
150 # So, the next (group, elem) is not correctly read
151 "gdcm-MR-PHILIPS-16-Multi-Seq.dcm"
154 # Create a specific list of dicom files that we know are part of a sequence
156 "SIEMENS_MAGNETOM-12-MONO2-FileSeq[0-9].dcm"
159 # Add a special test that requires dciodvfy from dicom3tools
160 INCLUDE(${GDCM_SOURCE_DIR}/CMake/FindDicom3Tools.cmake)
162 # This is a GLOB expression, change it into a list separated with a comma and \n
163 SET(GDCM_DATA_IMAGES)
164 SET(GDCM_DATA_SEQ_IMAGES)
165 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
166 GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
168 ADD_TEST("DCIODVFY-INPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${filename}")
169 ADD_TEST("DCIODVFY-OUTPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${GDCM_DATA_ROOT}/BaselineDicom/${filename_temp}")
170 ENDIF(DCIODVFY_FOUND)
171 STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
173 SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
174 # SEQ_LIST is a regular expression:
175 STRING(REGEX MATCH ${SEQ_LIST} is_seq ${filename_temp})
177 SET(GDCM_DATA_SEQ_IMAGES "${GDCM_DATA_SEQ_IMAGES}\n\"${filename_temp}\",")
182 # Populate GDCM_DATA_IMAGES:
183 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
184 "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
187 # Populate GDCM_DATA_SEQ_IMAGES:
188 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataSeqImages.h"
189 "const char * const gdcmDataSeqImages[] = { ${GDCM_DATA_SEQ_IMAGES}\n0 };\n"
192 #-----------------------------------------------------------------------------
193 # Trying to solve a bizarre problem when loading shared lib if gdcm is static
194 # Therefore I disable the test when building SHAREDLIBS
195 IF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)
196 ADD_LIBRARY(dynmodule MODULE dynmodule.cxx)
197 TARGET_LINK_LIBRARIES(dynmodule gdcm)
198 ADD_EXECUTABLE(loadmodule loadmodule.cxx )
199 TARGET_LINK_LIBRARIES(loadmodule gdcm -ldl)
200 ADD_TEST(loadmodule ${CXX_TEST_PATH}/loadmodule)
201 ENDIF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)