1 #=========================================================
3 INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
5 #=========================================================
7 # Add Libraries used in vv and clitk to avoid recompilation
8 FOREACH(clitkTool clitkExtractLung clitkExtractPatient)
9 WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
10 SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
12 ADD_LIBRARY(clitkSegmentationGgoLib
13 clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx
14 clitkAnatomicalFeatureDatabase.cxx
17 #=========================================================
19 IF(CLITK_BUILD_SEGMENTATION)
20 WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo)
21 ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C})
22 TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ${ITK_LIBRARIES})
24 WRAP_GGO(clitkFillMask_GGO_C clitkFillMask.ggo)
25 ADD_EXECUTABLE(clitkFillMask clitkFillMask.cxx ${clitkFillMask_GGO_C})
26 TARGET_LINK_LIBRARIES(clitkFillMask clitkCommon ${ITK_LIBRARIES})
28 ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C})
29 TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
31 ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx ${clitkExtractLung_GGO_C})
32 TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
34 # WRAP_GGO(clitkExtractAirwaysTreeInfo_GGO_C clitkExtractAirwaysTreeInfo.ggo)
35 # ADD_EXECUTABLE(clitkExtractAirwaysTreeInfo clitkExtractAirwaysTreeInfo.cxx ${clitkExtractAirwaysTreeInfo_GGO_C})
36 # TARGET_LINK_LIBRARIES(clitkExtractAirwaysTreeInfo clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
38 WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
39 ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
40 TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
42 WRAP_GGO(clitkBool_GGO_C clitkBool.ggo)
43 ADD_EXECUTABLE(clitkBool clitkBool.cxx ${clitkBool_GGO_C})
44 TARGET_LINK_LIBRARIES(clitkBool clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
46 WRAP_GGO(clitkExtractMediastinum_GGO_C clitkExtractMediastinum.ggo)
47 ADD_EXECUTABLE(clitkExtractMediastinum clitkExtractMediastinum.cxx ${clitkExtractMediastinum_GGO_C})
48 TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon clitkSegmentationGgoLib ${ITK_LIBRARIES})
50 WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo)
51 ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractLymphStations_GGO_C})
52 TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkSegmentationGgoLib clitkCommon vtkHybrid)
54 WRAP_GGO(clitkExtractMediastinalVessels_GGO_C clitkExtractMediastinalVessels.ggo)
55 ADD_EXECUTABLE(clitkExtractMediastinalVessels clitkExtractMediastinalVessels.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractMediastinalVessels_GGO_C})
56 TARGET_LINK_LIBRARIES(clitkExtractMediastinalVessels clitkSegmentationGgoLib clitkCommon vtkHybrid)
58 WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
59 ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
60 TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
62 WRAP_GGO(clitkMorphoReconstruction_GGO_C clitkMorphoReconstruction.ggo)
63 ADD_EXECUTABLE(clitkMorphoReconstruction clitkMorphoReconstruction.cxx clitkMorphoReconstructionGenericFilter.cxx ${clitkMorphoReconstruction_GGO_C})
64 TARGET_LINK_LIBRARIES(clitkMorphoReconstruction clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
66 WRAP_GGO(clitkCalculateDistanceMap_GGO_C clitkCalculateDistanceMap.ggo)
67 ADD_EXECUTABLE(clitkCalculateDistanceMap clitkCalculateDistanceMap.cxx clitkCalculateDistanceMapGenericFilter.cxx ${clitkCalculateDistanceMap_GGO_C})
68 TARGET_LINK_LIBRARIES(clitkCalculateDistanceMap clitkCommon ${ITK_LIBRARIES})
70 WRAP_GGO(clitkLevelSetSegmentation_GGO_C clitkLevelSetSegmentation.ggo)
71 ADD_EXECUTABLE(clitkLevelSetSegmentation clitkLevelSetSegmentation.cxx clitkLevelSetSegmentationGenericFilter.cxx ${clitkLevelSetSegmentation_GGO_C})
72 TARGET_LINK_LIBRARIES(clitkLevelSetSegmentation clitkCommon ${ITK_LIBRARIES})
74 WRAP_GGO(clitkAnd_GGO_C clitkAnd.ggo)
75 ADD_EXECUTABLE(clitkAnd clitkAnd.cxx clitkAndGenericFilter.cxx ${clitkAnd_GGO_C})
76 TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ${ITK_LIBRARIES} )
78 WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
79 ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx clitkRegionGrowingGenericFilter.cxx ${clitkRegionGrowing_GGO_C})
80 TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
82 WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
83 ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
84 TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
86 WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo)
87 ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
88 TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
90 WRAP_GGO(clitkFillImageRegion_GGO_C clitkFillImageRegion.ggo)
91 ADD_EXECUTABLE(clitkFillImageRegion clitkFillImageRegion.cxx clitkFillImageRegionGenericFilter.cxx ${clitkFillImageRegion_GGO_C})
92 TARGET_LINK_LIBRARIES(clitkFillImageRegion clitkCommon ${ITK_LIBRARIES})
94 # WRAP_GGO(clitkTestFilter_GGO_C clitkTestFilter.ggo)
95 # ADD_EXECUTABLE(clitkTestFilter clitkTestFilter.cxx ${clitkTestFilter_GGO_C})
96 # TARGET_LINK_LIBRARIES(clitkTestFilter clitkSegmentationGgoLib clitkCommon vtkHybrid)
98 ENDIF(CLITK_BUILD_SEGMENTATION)
100 # ADD_EXECUTABLE(ScalarImageMarkovRandomField1 ScalarImageMarkovRandomField1.cxx)
101 # TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ${ITK_LIBRARIES} ITKStatistics)
102 # ADD_EXECUTABLE(ScalarImageKmeansClassifier ScalarImageKmeansClassifier.cxx)
103 # TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ${ITK_LIBRARIES} ITKStatistics)