1 2004-02-03 Benoit Regrain
2 * gdcmDirList : to parse a hard drive directory in recursive (or not)
3 * gdcmDicomDir : add the load of directory
4 * Bug fix and print add-on
6 2004-02-03 Jean-Pierre Roux
7 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
9 2004-02-02 Jean-Pierre Roux
10 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
12 of the last synonym :-(
13 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
15 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
16 * FIX taking into account the possible 7fe0,0010 multiplicity
17 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
18 to allow removal of references to 7fe0,0010, to deal with
19 ACR-NEMA images, when 0028,0200 is meaningfull
21 2004-01-31 Jean-Pierre Roux
22 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
23 no longer writes 'Un' on disk
24 * FIX SQ elements with actual length are now dealt with corectly
25 * FIX gdcmFile::WriteBase make the difference, for color images, between
26 the length (for Palette expanded omages)
27 and Raw Length (non expanded image + Palette)
28 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
29 (that broke Write). Replaced by UL.
30 Aware user will reload the field if he
31 thinks it's necesssary
33 2004-01-30 Jean-Pierre Roux
34 * gdcmParser::CheckSwap() now defaults the filetype to ACR
35 when 'dirty Acr' is found, to be compliant with the new
38 * gdcmHederlHelper :add Pixel Type 'FD', for dealing with 'double' images.
39 (no DOUBLE images in kosher DICOM,
40 but so usefull for people that miss them ;-)
42 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
43 DICOMDIR related utilities (not checked as Windoze compliant)
45 2004-01-28 Jean-Pierre Roux
46 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
48 2004-01-27 Jean-Pierre Roux
49 * gdcmParser constructor has a new boolean param,'ignore_shadow',
50 to allow skipping the shadow elements, to save memory space.
51 The TRUE value for this param has to be used
52 with a FALSE value for the 'enable_sequence' param.
53 ('public elements' may be embedded in 'shadow Sequences')
54 * gdcmHeader methods now deal with 'embedded icones images' in the header
55 (even when an 'icone image sequence' is announced by the
56 element (0x0088,0x0200), but there is NO icone at all ...
58 * gdcmHeader sometimes Image Location value doesn't follow
59 the supposed processor endianity (see gdcmData/cr172241.dcm).
62 * gdcmHeader add the method
63 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
64 to get *all* the Header Entries with the same tag.
65 GetHeaderEntrySameName is probabely *useless*
66 (no meaning : Name is *not* an identifier within the Dictionnary)
68 2004-01-26 Benoit Regrain
69 * Bug fix in the print of hexadecimal representations. Remove long fields
70 in the print and add a third level of print to print them
72 2004-01-23 Benoit Regrain
73 * Bug fix on field having a VR = 'UI'. Assume that is a string field
74 * Bug fix on test suite after remove the strip made on not string fields
75 * Split the IsReadable method between gdcmParser which test that the file
76 is dicom and gdcmHeader which test that it's an image file
78 2004-01-22 Benoit Regrain
79 * DicomDir : clean code, add methods, set variables in protected or private
80 * gdcmUtil : bug fix for the clean string method
82 2004-01-19 Benoit Regrain
83 * Add the use of shadow dictionaries
84 * bug fix and coding style
86 2004-01-19 Benoit Regrain
87 * src/gdcmFile.cxx : bug fix concerning the close of file
88 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
89 * Add the update of header entries using the shadow library
91 2004-01-19 Benoit Regrain
92 * removal of file gdcmHeader2.cxx
93 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
94 inheriting from gdcmParser. This split is to prepare the integration
96 * bug fix under python
98 2004-01-16 Jean-Pierre Roux
99 * removal of class gdcmHeaderEntrySet
100 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
101 * add file gdcmHeader2.cxx
102 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
104 2004-01-15 Benoit Regrain
105 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
106 entries created while parsing the header. Thus, they will be destroyed
107 when the gdcmDictSet will be destroyed
108 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
111 2004-01-15 Benoit Regrain
112 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
113 made a fatal error because of the memory release at the end of program.
114 The problem was in vtkGdcmReader::ExecuteData where we were allocate
115 some memory and vtk seems to have some problems with that.
116 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
118 2004-01-14 Benoit Regrain
119 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
120 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
121 * src/*.[h|cxx] : make changes due to class name changes
122 * gdcmPython/demo/*.py : bug fix due to method names
124 2004-01-13 Benoit Regrain
125 * src/*.[h|cxx] : coding style
126 * vtk/*.[h|cxx] : coding style
128 2004-01-13 Benoit Regrain
129 * gdcmPython/testSuite.py : test the readable flag of file for tests
130 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
131 It's lied to the stl compilation by MSVC (windows, always windows...)
132 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
134 2004-01-12 Benoit Regrain
135 * src/*.h : add comments
136 * src/gdcmDictSet.h : set the method BuildDictPath in public
137 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
138 directly setted in the source code
139 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
142 2004-01-09 Benoit Regrain
143 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
144 * setup.py : use a reference to gdcmVERSION
146 2004-01-07 Benoit Regrain
147 * Modification to compile with the distutils.
150 2003-12-10 Benoit Regrain
151 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
152 can use a gdcmHeaderHelper to load datas
153 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
154 made in the source code
156 2003-12-10 Benoit Regrain
157 * Update Windows projects and .cvsignore files
159 2003-11-12 Jean-Pierre Roux
160 *ENH gdcmHeader constructor has one more parameter (default value : false)
161 that allows the user to 'go inside' the SeQuences only
163 gdcmElValSet:Print takes it into account
165 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
166 *ENH: Update gdcmPython/CMakeLists
167 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
168 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
170 2003-11-10 Jean-Pierre Roux
171 *FIX : gdcmHeader::LoadElements is now based
172 on the ListTag listElem member,
173 not longer on the TagElValueHT tagHt member
174 *ENH : PrintPubElVal shows (temporarily) both results,
175 with the tagHt member and the listElem member.
176 (it's easier to 'see' the problems when using Printheader)
178 *FIX : old private member LgrElem is now splitted into
179 ReadLength : Length actually found on disk (updated only
180 if bug fixing is necessary), for internal
182 UsableLength : Updated by FixFoundLength, to fix a bug
183 or to allow Parser going on.
184 Will allow to re-write a kosher header when a SeQuence
185 with a length (not 0000) is found
186 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
187 because gdcmElValSet::Add does not update ListElem
190 2003-11-07 Jean-Pierre Roux
191 *FIX misstyping in Transfert Syntax name table
192 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
193 when they have an actual length (not 0000 nor FFFFF)
194 (Nobody should care of it, but DICOMDIR explorers)
196 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
197 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
199 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
200 *ENH: vtkGdcmReader now supports LUT !
201 (vtkgdcmViewer for now is not able to use them though)
203 2003-11-05 Jean-Pierre Roux
204 * in testSuite.py : new files names for checking the package
205 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
206 that returns the pixel area size to the *aware* (vtk) user
207 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
209 2003-11-05 Benoit Regrain
210 * in testSuite.py : Modify the rules for checking the paths
211 : Explicit error messages
212 * in __init__.py : Related modif
214 2003-11-03 Jean-Pierre Roux
215 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
216 to be used by aware (vtk) users that want to manage
217 LUT (and no to turn the PALETTE image into an RGB pixels one)
218 * GetPixelType now returns 8U for 24 Bits images
219 (vtkGdcmReader compliant)
221 2003-10-31 Jean-Pierre Roux
222 * Removal of *all* gdcmData images and add them again
223 in order to loose the 'history' of un-anonymised images
225 2003-10-31 Jean-Pierre Roux
226 *RMV : removal of useless jBitsInJsample.h
227 for both 8 and 12 Bits JPEG Lossy Libraries
229 2003-10-31 Jean-Pierre Roux
230 * ENH : Add the functions gdcmFile::GetImageDataRaw
231 gdcmFile::GetImageDataIntoVectorRaw
232 that act as GetImageData and GetImageDataIntoVector
233 except the making of an RGB Plane from Gray Plane + LUT
234 Intended to aware (vtk) users who know how to manage
237 GetLUTRGBA return a R,G,B,A LUT if any
238 lgrTotaleRaw gives the 'Raw' length
239 GetImageDataRaw returns the gray Plane
240 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
241 (They stay Grey, just like with other Dicom viewers :-(
243 2003-10-30 Jean-Pierre Roux
244 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
246 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
247 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
248 being coherents dicom files.
250 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
251 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
253 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
254 *ENH: Two steps is necessary to please VC++ compiler...
255 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
256 *ENH: Add include dir to medcon lib
257 *FIX: only one function is being exported for now !
258 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
260 2003-10-29 Jean-Pierre Roux
261 * adding gdcmHeader::GetLUTRGBA
262 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
263 --> Mathieu, the modif u're waiting for is not yet committed
264 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
266 2003-10-27 Jean-Pierre Roux
267 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
268 . 00191113.dcm DermaColorLossLess.dcm
269 MxTwinLossLess.dcm RadBWLossLess.dcm
270 * ENH: For version prior to vtkImageViewer2 -r 1.19
271 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
273 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
274 * Removal of ido stuff in CMakeLists.txt
276 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
277 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
278 * FIX: remove a call to ->Modified ... see comments
279 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
281 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
282 * FIX: Problem with path for libvtkgdcmPython
283 * ENH: Try adding a search script for python site-package
284 * RMV: Remove some file from medcon lib that are not necessary
285 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
286 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
287 * FIX: More pragma disable fro VC++,
288 I don't think I break something as it is also disable in VTK/ITK.
289 But it fasten debug compilation time.
291 2003-10-23 Jean-Pierre Roux
292 * gdcm now deals with 16 Bits Run Length Encoded images
293 (they are compressed as 2 planes images,
294 one for the high Bytes, the other for low Bytes)
296 2003-10-22 Jean-Pierre Roux
297 * Now CheckRead takes into account :
298 the bugged 'Leonardo' Siemens images
299 the XA images, sent thru the burning VPRO station
300 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
303 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
304 * FIX: When copying a Makefile.am to CMakeLists.txt
305 one should remove the '\'
307 2003-10-22 Jean-Pierre Roux
308 * in gdcmData adding a bugged 'Leonardo' Siemens image
309 (wrong lengths in header)
310 OK with gdcm, KO with the other viewers :-)
311 * add a GE dlx XA image, thru the VEPRO burning station
314 2003-10-21 Jean-Pierre Roux
315 * in gdcmData add the checkvtkgdcmViewer.sh shell script
316 for a brutal checking of vtkgdcmViewer compliance
318 2003-10-21 Jean-Pierre Roux
319 * add the files for 'xmedcon' Jpeg Lossless library
320 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
322 2003-10-21 Jean-Pierre Roux
323 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
325 2003-10-21 Jean-Pierre Roux
326 * garbage Siemens 'Leonardo' images dealt with
327 (the patch is easy to remove)
328 * cosmetic changes to avoid warnings
330 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
331 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
332 no need to press 'r' now.
334 2003-10-20 Jean-Pierre Roux
335 * upgrade of checkRead.sh checkWrite.sh according
336 to new Jpeg Lossless decompressor
337 * add US.3405.1.dcm, a genuine RGB medical file ...
338 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
339 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
341 2003-10-15 Jean-Pierre Roux
342 * general anonymisation in gdcmData
343 * adding the 'color files' from
344 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
345 * adding some well knowed bugged-header images
346 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
347 waiting for their inclusion in Python testsuite
349 2003-10-15 Jean-Pierre Roux
350 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
351 no longer seg faults when file is not found
353 2003-10-14 Jean-Pierre Roux
354 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
356 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
357 * TODO: *.in file to genereate a UseGDCM later
359 2003-10-14 Jean-Pierre Roux
360 * Some supposed-to-be Dicom Images have no preamble.
361 OpenFile takes it into account
362 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
363 * Missing elements added in dicomV3.dic
364 (just to be affraid : have a look at
365 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
366 and do it again next year ;->
368 2003-10-13 Jean-Pierre Roux
369 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
370 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
371 But there are NOT. It's fixed !
373 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
374 * FIX: "jpeglib.h" was not found on VC++
375 * FIX: vtkgdcm was not being installed
377 2003-10-10 Jean-Pierre Roux
378 * ENH : OpenFile closes the file if it *really* doesn't look like
379 an ACR-NEMA / DICOM one.
380 * FIX : testWrite no longer writes an empty file if the source file
382 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
385 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
386 * FIX: CMake generate now documentation
387 * ENH: out of source doc build !
388 * ENH: Generate both user and dev documentation
389 * ENH: Should work on windows too
390 * ENH: Only one doxygen config.in file is needed
391 * FIX: make install should be ok now on ùnix plateform
392 * FIX: PATH to dictionary was wrong (missing /)
393 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
395 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
396 * vtkGdcmReader is now able to read rgb dicom file.
397 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
398 * added a gdcmViewer to vtk test, use mouse to control
399 window level & window width
401 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
402 * CMake-ification of gdcm, we have now two build system
403 * FIX: on cygwin Wsock32 doesn't exist
404 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
406 2003-10-06 Emanuel Ollart
407 * FIX : compilation process wad broken.
408 Changed gdcmViewer_sources to vtkgdcmViewer_sources
410 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
411 * change gdcmViewer -> vtkgdcmViewer
412 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
414 2003-10-06 Jean-Pierre Roux
415 * FIX :A few nasty patches to allow the reading of a lot of nasty images
416 ( e.g : well known GE images with a wrong elem length,
417 : Philips MRI Images with a wrong Huffman table)
418 * still to be done : allow the reading of bugged LEONARDO Siemens images
420 2003-10-03 Jean-Pierre Roux
421 * Odd length strings are padded with '\0' (not with spaces,
422 to remain compliant with already defined strings,
423 like Transfert Syntax UID and others)
425 2003-10-03 Jean-Pierre Roux
426 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
427 to allow displaying RGB images (not only by affim ;-)
429 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
430 * vtkGdcmReader is now able to read rgb dicom file.
431 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
433 2003-10-03 Jean-Pierre Roux
434 * A few nasty patches to allow the reading of a lot of nasty images
435 ( e.g : well known GE images with a wrong elem length,
436 : Philips MRI Images with a wrong Huffman table)
437 * still to be done : allow the reading of bugged LEONARDO Siemens images
439 2003-10-03 Jean-Pierre Roux
440 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
442 2003-10-03 Jean-Pierre Roux
443 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
444 to allow displaying RGB images (not only by affim ;-)
446 2003-10-03 Jean-Pierre Roux
447 * gdcmFile::GetImageDataIntoVector now
448 - deals with MultiFrames MultiFragments Run Length Encoded files
449 - deals with YcBcR (YBR_FULL) files
450 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
451 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
454 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
455 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
456 Two reasons: - clear things
457 - third parties acces gdcm through header files, so won't
458 suffer anymore VC++ complains
459 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
460 * add argv[1] in testvtkGdcmReader.cxx
463 2003-09-24 Jean-Pierre Roux
464 * The lines are now eigthy characters long.for
465 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
467 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
468 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
469 char* to std::string. Thus, the use of strdup becomes useless. (see
470 previous commis of Malaterre)
471 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
472 before the last Malaterre's commit.
474 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
475 * This commit should fix the Debug building under VC++, the problem
476 was mainly a mixture of debug and release lib being loaded at startup.
477 * I also remove a depency to a specific C function: strdup. Because I had
478 to force the link to msvcrtd (whereas strdup is in libc).
480 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
481 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
482 located in the gdcmCommon.h file. All use of reference of tha has been
483 changed to now use the variable GDCM_UNFOUND.
485 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
487 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
488 Dicom dictionary. The test suite can now be run again. Note:
489 I'm note very happy with the " (RET)" changes. I believe this
490 RETAINED comment should be dropped when parsing the dictionary.
493 - AUTHORS updated and now in alphabetical order
494 * Makefile.am now exports gdcm.dsw for Windoze users.
496 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
497 * cygwin complains about missing std:: in subdir Test/
499 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
500 * remove some methods that are now in gdcmHeaderHelper
502 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
503 * vtkGdcmReader set spacing and origin correctly
505 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
506 * Fix a few delete/delete[] mismatch
508 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
509 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
510 interpretation to data given by gdcmHeader. For instance there are
511 heuristics to get informations (look at different places).
512 * it also include a specific class: gdcmSerieHeaderHelper devoted to
513 sorting DICOM images based on different strategies.
514 * modified Makefiles accordingly.
516 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
517 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
518 when building in debug mode
519 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
520 src/win32/gdcmdll.dsp
521 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
523 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
524 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
526 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
527 * src/win32/libgdcmjpeg12.dsp was not dos format
528 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
529 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
531 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
532 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
534 * src/gdcmFile.cxx : bug fix in affectation type
535 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
536 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
537 * Modifs of MVSC projects to compile them. Not concerning 2 identic
538 symbols... future problem ?
540 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
541 * src/win32/libgdcmijpeg12.dsp was missing
542 * modified gdcm.dsw accordingly
544 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
545 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
547 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
548 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
549 commit of JPR (before his hollidays to facilitate our work).
550 * setup.py : bug fix in code. Modifications made while the last commit
551 of JPR. The code hasn't been tested before the commit... it's so
552 useless to make that (for best programmer that is JPR) !!!
554 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
555 * tagged the current version as Version0_3 (i.e. version 0.3)
557 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
558 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
559 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
560 * *.dsp : modifications to use new libgdcmijpeg8 library
561 * setup.py : bug fix on VTKPATH variable
562 * PACKAGER : adding all concerning windows
564 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
565 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
567 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
568 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
569 test suite reported error.
570 * PACKAGER file added (describes what a packager must do when
571 packaging a new release).
572 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
573 * configure.in: upgraded version number to 0.3.0
574 * fixing build of rpm (through rpm -ta):
575 - Doc/Makefile.am exports proper doxygen files
576 - src/jpeg/libijg8/Makefile.am exports the include files.
578 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
579 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
580 * src/gdcmHeader.h : formatting code
582 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
583 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
584 We were obtaining error message from vtk. Now, creation of file list
585 is made in an internal list to prevent this problem.
586 Bug fix when output is empty.
587 Bug fix in update of progress value. Previous commit for this was a bad
589 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
591 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
592 * src/gdcmHeader.h : added method to get the file name
593 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
594 files. Added method to remove all files on the input
595 Added FIXME comment concerning the bad parsing of header made by
596 ExecuteInformation method (in ExecuteData method)
598 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
599 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
600 when using make instal.
601 * src/gdcmFile.cxx : bug fix under Window after JPR commit
602 RQ : the JPR doesn't appear in the ChangeLog... normal for him
604 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
605 * setup.py : adding include dir of jpeg lib to compile all sources
606 * */Win32/*.dsp : JPR fix for windows compilation
608 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
609 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
611 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
612 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
614 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
615 * setup.py is again effective on un*x (takes into account the
616 addon of the jpeg library)
617 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
618 * Doc/Doxy* updated (includes above enhancements)
619 * INSTALL now points to web documentation
621 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
622 * src/gdcmHeader.h doesn't make unnecessary reference to
624 * gdcmPython/Makefile.am now avoids calling the wrappers for the
626 * src/gdcm*.[cxx|h] :
627 - to allow compilation with gcc 3.x
628 -- clean up of STL usage (added explicit usage of std::)
629 -- small fixes on exceptions.
630 Note: linking not tested !
631 - clean of doxygen comments to avoid warnings at documentation
633 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
634 dependent convertion).
636 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
637 * Clean up of previous JPR garbage commit (not even commented in the
639 - Test/Makefile.am removed the reference to unexisting testTS.cxx
640 - moved all jpeg related files from src to src/jpeg/libijg8, with
641 addition/modification of Makefile.am and configure.in.
642 - the testSuite is still brain damage (not guilty).
644 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
645 * WrapVTK.py : modifications to get correctly vtk source files to
647 * vtk/vtkGdcmReader.cxx : modification for an already existing name
648 (FileName -> Filename)
650 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
651 * vtk/vtkGdcmReader.[cxx/h]:
652 - UpdateProgress method should now be effective
653 - removed the limitation on having only images loaded (as opposed
655 - when building a stack of images/volume, a lesser number of
656 gdcmHeader and gdcmFile instances should be used (hopefully
657 accelerating things).
658 - when building a stack of images/volumes, files which are not
659 loadable (wrong path-filename, wrong permissions on existing file,
660 or file not parsable by gdcm) are replaced with a black image
661 in the stack (for the caller to notice the problem).
663 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
664 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
666 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
667 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
668 between standard library (std) and vtk library (problems are found
669 under Windows... thanks Windows !)
671 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
672 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
674 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
676 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
677 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
679 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
680 * When compiling with distutils (see setup.py) the C++ compiler is
681 called with different flags than the default ones (with automake).
682 In order to fix all those warning, I compiled gdcm with the command
683 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
684 and went for warning fixes:
685 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
686 up from unused variables.
687 - vtk/vtkGdcmReader.cxx: potential bug fix.
688 * src/gdcmHeader.h: Doxygen warning cleanup
690 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
692 - typemaps correction to take into account the systematic replacement
693 of "using namespace std" with std:: prefix e.g. std::list,
694 std::string... (cf changes of 2003-05-21).
695 - gdcmGlob global variable of type gdcmGlobal (defined in
696 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
697 exported to Python a as cvar.
698 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
699 and GetPubDictTagNamesByCategory() as a replacement for deprecated
700 gdcmDictSet.GetPubDictTagNames() and
701 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
703 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
704 with the above changes.
706 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
707 * setup.py, manifest.in : bug fix under linux
709 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
710 * Modification of setup.py to compile vtk part too. Then, we have 2
711 wrappers which must work with same distutils. For that, we have a
712 generic distutils in distusiltsWrapping.py ; with :
713 - build_extWrap class to wrap generically all extensions,
714 - ExtensionWrap base class for all wrapping extension that contains
716 - Wrapper interface which wrap sources
717 + In WrapSwig.py we have extension and wrapper for Swig
718 + In WrapVTK.py we have extension and wrapper for VTK
719 * MANIFEST.in : modifications to consider vtk directory and new python
720 files for compilation
722 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
723 * Added python wrappers of vtkGdcmReader vtk class (see the
724 source in vtk/vtkGdcmReader.cxx) :
725 - vtk/Makefile.am now builds a library
726 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
727 python library (as opposed to _gdcm.so wich are the python
728 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
729 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
731 - configure.in has an additional flag --enable-vtk that needs
732 to be set to enable compilation of vtk related code, that is:
733 + vtk/vtkGdcmReader.so and
734 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
735 + gdcmPython/vtkgdcmPython.so (see above)
736 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
737 be read when compressed or when HighBit + 1 != BitsStored),
738 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
739 the usage of the python wrapper of vtkGdcmReader vtk class.
740 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
741 * src/*.[h] all occurences of stl classes are now prefixed with
742 std::, and all occurences of "using namespace std;" where removed.
743 This is to avoid pollution of global namespace in included files.
744 Apparently vtk does not avoid this pitfall: when using both
745 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
746 collision of various stl members (principally cout...).
747 * gdcmPython/testSuite.py now cleanly removes temprory generated
749 * gdcmPython/gdcm.i now declares a typemap for std::string (to
750 comply with above changes)
752 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
753 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
754 * vtk/vtkGdcmReader.cxx now properly inports the image in the
755 vtk data structure (an image Flip was required).
756 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
757 * cosmetic changes in documentation.
759 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
760 * src/gdcmHeader.cxx: the constructor no longer exits when an
761 unexisting file is given as argument.
762 * The subdirectory Data (containing all the images used for the
763 test suite) is not part of this repository anymore. A new module
764 containing those images is now available at
765 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
766 with the name gdcmData.
767 All the python scripts (including the package initialisation file
768 gdcmPython/__init__.py) were adapated to take this change into
769 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
771 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
772 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
773 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
774 demo of the usage of this class.
775 Compilation of this vtk part is only done when using the --enable-vtk
776 at configure (or autogen.sh) stage.
778 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
779 * More memory link related corrections and documentation fixes.
781 - maximum info is obtained with a command of the form:
782 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
783 --show-reachable=yes PrintHeader
784 - the remaining reachable blocks seem to come from the STL
785 allocation scheme through the usage of map and list. It looks
786 like this memory cannot be freed but it is not a memory leak
787 (in fact further invocation to the STL would recollect the
788 unused memory allthough it cannot explicitely be freed).
789 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
790 of displaying an image parsed with gdcm and displayed with VTK.
791 Note: some images don't seem to work e.g.
792 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
793 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
794 Allthough this weakens the semantics, it is a ditch attempt to
795 make gdcm more thread friendly.
797 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
798 * Memory link hunt (by using valgrind through the command
799 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
800 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
801 gdcmHeader::_dicom_vr.
802 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
803 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
805 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
807 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
808 * src/Makefile.am now exports all the necessary include files at
812 * UpdateGroupLength replaced by new one
815 * UpdateGroupLength re-written using H-Table
816 (named UpdateGroupLengthNew untill checks are over)
818 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
819 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
820 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
822 - gdcmHeader::GetPubElValSet removed.
823 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
824 UpdateGroupLength, WriteElements, Write.
825 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
826 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
827 carried the same semantics.
828 - src/gdcmHeaderIdo.cxx changed accordingly.
829 - gdcmFile::WriteBase now regroups all the codes from previous
830 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
831 - enum FileType moved to gdcmCommon.h
832 * src/gdcmHeader.cxx AddDefault trashed
834 * getimageDataSize now calls gdcmGetXSize
835 * Test/*.cxx changed to agree with above changes
837 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
838 * src/gdcmHeader.h: LoadElements() is not a public method anymore
839 (to avoid double call by end user).
840 * Test/*.cxx LoadElements() doesn't need to be called explicitely
841 by end user, since gdcmHeader::gdcmHeader now handles it.
843 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
844 * gdcm/Doc many doxygen changes:
845 - Doxyfile now has two different versions, DoxyfileUsers that generates
846 the html.users end users oriented documentation and
847 DoxyfileDeveloppers that generates the html.developper developper
848 oriented documentation.
849 - README changed accordingly
850 - requirement.txt removed (old design info moved to TODO).
851 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
852 DoxyMainPage.txt, DoxyPython.txt provide more information.
853 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
854 be updated by simply regenerating the docs with doxygen and copying
855 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
856 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
857 all the tests in the form "if (<map>.count() >1)" were removed.
858 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
859 ill-formed documentation sections.
860 * src/gdcmHeader.cxx: ditto
862 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
863 * setup.py fixed for un*x (needed macro for stdint.h)
864 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
865 un*ces with sh-utils test utility.
866 * gdcmPython/demo/test.py renamed to PrintHeader.py
867 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
868 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
869 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
870 * src/gdcm*.cxx JPR's bad inclusion fixed.
872 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
873 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
874 * gdcmPython/demo/test.py changed accordingly.
876 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
877 * gdcmPython/Makefile.am fixed linking against libstdc++
878 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
879 * Swig subdir (historical tests of swig version 1.3.17++) removed
880 * Test/testChangeEntete.cxx some lines commented out in order to make
882 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
883 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
885 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
886 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
887 hence the user doesn't need this explicit call.
888 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
889 i.e. LoadElements() call removed.
890 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
891 - src/Makefile.am declares the proper flag for g++.
892 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
893 for adding user defined new tags.
894 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
895 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
896 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
898 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
899 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
900 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
901 src/Makefile.am : the project should properly compile and install
902 with the autotools, included the python wrappers part.
903 * gdcm.spec.in : added a spec file for RPM packaging.
905 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
906 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
908 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
909 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
910 to exported to the environement (see gdcmPython/testSuite.py
912 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
913 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
914 ElValue class renamed to gdcmElValue for obvious consistency reasons.
915 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
916 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
918 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
919 * gdcmPython/__init__.py doesn't crash anymore when running in
920 in InstallMode or PreInstallMode but with an environement given
921 value of GDCM_DICT_PATH.
922 * src/gdcmDictSet.[cxx/h] coding style.
924 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
925 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
926 * src/gdcm.h general comments moved to TODO, and README
927 * src/gdcm.h should now be seen as a user commodity (including it
928 should suffice to fully use gdcm). It is nowhere including within
929 any of the kernel files src/*.cxx and src/*.h.
931 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
932 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
933 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
935 * src/gdcm*.cxx only include their corresponding include file
936 (as opposed to gdcm.h)
937 * gdcmPython/gdcm.i changed accordingly
938 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
939 the autogen.sh generated "make snapshot" command to work.
940 * autogen.sh removed history related references to crea package.
942 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
943 * distutilsSwigCPlusPlus.py work around some swig portability
946 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
947 * Eventually, python/gdcmPython was renamed to gdcmPython. This
948 was done in a last ditch attempt to get setup.py _really_
949 operationnal. The python/gdcmPython layaout add the advantage
950 of hidding away the python related distutils specific files
951 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
952 Alas, the src directory was out of scope (i.e. it's relative
953 position to setup.py was ../src) which made things impossible to
954 handle (see previous version of python/setup.py). Crossing fingers...
956 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
957 * python/setup.py now works on Un*x. (harder than I thougth)
958 * python/distutilsSwigCPlusPlus.py can now have include files
959 among the list of sources.
961 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
962 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
963 * modifications in MSVC projects
965 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
966 * As stated by the first lines of Test/ExceptionAndPython/README, it
967 looks like we can move back to original usage of exception within
968 src/gdcm* and hence remove the errno stuff that was introduced
969 as a quick and dirty fixture of this problem (added to the TODO).
970 * Doc/Doxyfile configuration file for Doxygen and corresponding
971 README file for usage added.
972 * Test/testWrite.cxx added. This new test comes from a split of
973 test.cxx that is now reverted to its original purpous i.e.
974 testing the proper parsing of a Dicom related file.
975 testWrite.cxx concentrates on testing the IO part of gdcm.
976 * Test/bug1.cxx (containing a bug on WIn32) added.
977 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
978 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
979 whose purpose is to publish the content of the TagNames of the
980 Dicom public dictionnary were not accessible without an
981 instance of class gdcmHeader.
982 - those methods are now static methods of gdcmDictSet and hence
983 require no instances at all to be invocated.
984 - within gdcmDictSet this change required to change some method
985 to class methods (i.e. are now static) among which SetDictPath
986 (renamed to BuildDictPath) and LoadDefaultPubDict.
987 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
988 the above changes by calling the new method classes of gdcmDictSet.
989 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
990 the above to be effective.
991 * python/gdcmPython: in order to wrap properly the above changes
992 for Python, swig version now needs to be > 1.3.17.
993 * python/gdcmPython/Makefile fixed to adapt itself to new
994 configure/make shema introduced by Johan Montagnat (thanks for the
995 contribution). Alas this Makefile cannot be turned into a proper
996 Makefile.am without some heavy changes in the configure.in
997 (for python dectection).
998 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
999 now avoids publishing the empty entries.
1001 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1002 * python/setup.py : bug fix concerning install under windows
1003 ExtraPath reused :-P
1004 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1006 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1007 * Dicts/dicomV3.dic : remove double spaces !!!
1008 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1009 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1012 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1013 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1014 method. Doxygenation.
1015 * src/gdcm.h clean up of JPR spurious comments.
1017 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1018 * python/distutilsSwigCPlusPlus.py now properly collects the
1019 shadow classes generated by "swig -c++" (gdcm.py in our case)
1020 when using "python setup.py install".
1021 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1022 reexports the working classes.
1023 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1024 by the classical C errno scheme. This is to prevent an obscure
1025 behavior of the python wrappers when importing wxPython.wx prior
1026 to gdcmPython (which ended up in an abort call). An illustration
1027 of this oddity can be found in the Test/ExceptionAndPython
1028 subdir (see the README file). This problem probably due to
1029 an combination of g++ and dynamic loading.
1030 * added Test/ExceptionAndPython (see above)
1032 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1033 * Changed the layout of the python part to avoid bloating main
1034 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1035 i.e. the distutils arsenal. All the python related stuff is
1036 again in a python subdir, but the package itself is now in
1038 * setup.py was cleaned up:
1039 - pythonIncludePath removed
1040 - python setup.py bdist target is now functional.
1041 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1042 collision with other packages). gdcmPython/demo/*.py changed
1045 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1046 * python subdir moved to gdcmPython (preparation of distutils packaging).
1047 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1048 distutils installer is operational.
1049 * - gdcmPython/__init__.py now properly loads the swig generated
1050 shadow classes (from gdcm.py).
1051 - gdcmPython/demo/*.py changed to import the package gdcmPython
1052 instead of gdcmPython/demo/load.py.
1053 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1055 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1056 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1057 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1058 entries within the associated public Dicom dictionary resp. the same
1059 information but sorted by the fourth field (PAT, IMG, DIR) of the
1061 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1062 are now in the "???" group.
1063 - python/gdcm.i changed accordingly,
1064 - python/demo/printGroupedPublicDict.py added, that gives an example
1065 of the above new functionalities in Python.
1067 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1068 * src/gdcm.h, gdcmHeader.cxx:
1069 - historic references to glib's g_malloc and g_free (#defined)
1070 were definitively removed.
1071 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1072 * src/gdcmElValSet.cxx:
1073 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1074 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1075 - GetElValue(string) renamed to GetElValueByName.
1076 - Added GetElementByName(string).
1077 * src/gdcmHeader.cxx: added
1078 - GetPubElValRepByNumber(guint16, guint16)
1079 - GetPubElValRepByName(string)
1080 - GetShaElValRepByNumber(guint16, guint16)
1081 - GetShaElValRepByName(string)
1082 - GetShaElValByNumber(guint16, guint16)
1083 - GetShaElValRepByName(string)
1084 - GetElValRepByNumber(guint16, guint16)
1085 - GetElValRepByName(string)
1086 - GetElValByNumber(guint16, guint16)
1087 - GetElValRepByName(string)
1088 * Doc/requirements.txt added.
1090 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1091 * Test/Makefile building now depends on the one of libgdcm.so
1092 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1093 pixel data) aware which enables finding the address (offset) of
1094 the pixel data of JPEG encoded DICOM files. This leaves only a single
1095 file in the testSuite whose pixel data address (offset) is unknown.
1096 * python/testSuite.py changed accordingly.
1098 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1099 * VC++ has some strong limitations when working with the STL, as stated
1100 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1101 "Also note that some STL containers (map, set, queue, list, deque)
1102 cannot be exported. [...]
1103 Some STL classes contain nested classes. These classes can not
1105 This is caused by a designed limitation that once a template
1106 class is instantiated, it can not be re-instantiated and
1108 Since our usage of map<> is ubiquitous in gdcm, this "designed
1109 limitation" of VC++ is a pitfall.
1110 Hence the Python wrappers of gdcm cannot be incrementally linked
1111 against the c++ dynamic library. The dirty but only workaround is
1112 to forget about incremental link of dynamic libraries and to generate
1113 the Python wrappers library with the inclusions of the underlying C++
1115 The following modifications concern this matter on Win32/VC++:
1116 - wrapping python correct with standalone wrapped dll (don't use separate
1117 dll under windows !!!!)
1118 - python21_d debug mode enabled (ask Frog how to use it :-)
1119 - NO problem with having an STL member of class for example string in C++
1120 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1121 - Python test of dcmlib in Python is ok under windows on a large set
1123 * removed glib references
1124 * typedef's inserted in gdcm.i for correct swig type management
1126 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1127 * python/demo/*.py load.py extracted from test.py. Added explore.py
1128 that only displays required tags and testAll.py that parses all
1129 the files of the testsuite without using unittest.
1130 * python/testSuite.py other additional test on new files added.
1131 * Data/* new test files added accordingly to the testSuite.
1132 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1133 the vr in the file differs from the one of the dictionary.
1135 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1136 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1137 values, but limits itself to values which are below a user specified
1138 size (by default 1024 bytes).
1139 * python/gdcm.i : elements not loaded (because their size is above the
1140 user specified treshold) are exported with their TagKey as key of the
1141 python dictionary. This enables the testsuite to make some checks
1142 on the unloaded elements (since we have their offset and size).
1143 * python/testSuite.py
1144 - now tests for the existence and proper value of the pixel data
1145 - two new examples added.
1146 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1148 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1149 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1150 aware. See the strategy comments in gdcmHeader::FindeLength().
1151 * Test/test.cxx now accepts a filename as first argument.
1152 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1153 * python/testSuite.py changed to integrate test on above files.
1155 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1156 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1157 the vr was also RET.
1158 * python/testSuite.py more tests added.
1160 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1161 * python/testSuite.py unittest test suite added (uses Data)
1162 * Data/* dcm and acr files for the test suite.
1163 * glib dependance removed from un*x version. We now use ISO C99
1164 7.18 Integer types (see stdint.h)
1165 - python/Makefile, src/Makefile src/gdcm.h
1166 * src/ when an explicit vr (like dicom files) suddenly poped an
1167 implicit element we use to mark the underlying DictEntry of the
1168 concerned ElValue with "Implicit". This strategy was damageable
1169 too the public or provite dictionaries, since some of their vr
1170 would be changed. Since Header::FindLength heavily relies on the
1171 detection by Header::FindVR of falsely explicit elements, I
1172 added an extra ImplicitVr member to ElValue (boolean).
1173 The rest of the changes we the necessary adaptations.
1175 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1176 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1178 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1180 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1181 * Adaptation for porting to VC++:
1183 o forced to use std namespace (for string to be known)
1184 o all class use __declspec export style on WIN32
1185 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1186 (in stdlib.h on Win32 but in std:: for gcc)
1187 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1188 variable GDCM_DICT_PATH.
1189 * src/gdcmHeader.cxx verbose comments made discrete.
1191 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1192 * python/gdcm.i: added a typemap that converts a C++ hashing table
1193 to native Python dictionary.
1194 * python/demo/test.py:
1195 - now uses the native dictionary for exploration of gdcmHeader.
1196 - takes an optional filename argument (the file to parse).
1197 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1198 PubElVals hashing table.
1199 * Dicts/dicomV3.dic removed error prone trailing spaces.
1201 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1202 * Python wrapping process moved away from src/Makefile to
1203 newly created python/Makefile (as well as gdcm.i)
1204 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1205 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1206 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1207 from the environement variable GDCM_DICT_PATH (when existing).
1208 * src/gdcmDict::GetTag bug fix.
1210 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1211 * Straightforward temporary fixes for swig to build the python wrappers.
1212 src/Makefile now has a python working entry [by working we mean
1213 that we can import de shadow classes without errors].
1215 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1216 * hashtest.cxx removed (since allready in Test)
1217 * src/gdcmlib.h renamed to src/gdcm.h
1218 * src/dcm.i renamed to src/gdcm.i
1219 * src/Makefile prepared for python wrapping
1221 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1222 * src/gdcmHeader.cxx :
1223 - Parsing of header is now separated from loading of element values
1224 (see gdcmHeader::LoadElements).
1225 - general clean up of hopefully all file access (creation of
1226 ReadInt16 and ReadInt32)
1228 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1229 * src/gdcmHeader.cxx :
1230 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1232 - SetLgrElem renamed to SetLength
1233 - GetLgrElem renamed to GetLength
1234 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1235 * src/gdcmElValSet.cxx fixed both GetElValue methods
1236 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1237 due to IdoDude was cleaned out.
1239 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1240 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1241 concentrates on finding the value representation (when it exists).
1242 RecupLgr now only finds the element value length, and it avoids
1243 returning the unecessary skL (skipped length).
1244 Also, offsetCourant was simply removed (with taille_fich) since
1245 it was redundant with the File position internals (by using
1246 ftell and fseek). This also made skL (see above in RecupLgr) usage
1248 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1249 on the libido specificities which are handled through class
1251 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1254 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1255 * Truckload of changes. Parsing of header is barely functional
1256 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1258 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1259 * src/gdcmHeader.cxx many addons of low level methods
1261 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1262 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1263 and _IdDcmSWAP_LONG.
1265 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1266 * This corresponds to all the changes decided at the meeting of
1267 May 23 2002. Needless to say we are running late...