1 2004-02-11 Benoit Regrain
2 * FIX : memory leaks and the set of ArgDelete methods in gdcmDicomDir
5 2004-02-10 Benoit Regrain
6 * FIX : bug fix in the gdcmDirList for the recursivity in directories
7 * FIX : in gdcmDicomDir when the directory is empty
8 * ENH : add callback and methods to get the progression of dicomDir
11 2004-02-06 Jean-Pierre Roux
12 * ENH : - now gdcmDicomDir::CreateDicomDir() returns also the meta elements
13 - GDCM_META added to gdcmDicomDirType
14 - class gdcmMeta created
15 * ENH : - A brief summary is now displayed at the beginning of
16 'testDicomDir' to help disaster magnitude estimation
17 * REM : Now useless Test/explDICOMDIR.cxx
19 2004-02-05 Benoit Regrain
20 * ENH : add methods in gdcmObject to get the hash table or the list of
22 * FIX : wrapping python for ListPatient, ListStudy, ListSerie, ListImage
23 * FIX : wrapping python for TagHeaderEntryHT
25 2004-02-04 Benoit Regrain
26 * FIX : even length for some strings when writting the dicom dir
27 * FIX : sort the images in the dicom dir
28 * FIX : Bug fix for python use of dicom dir
31 2004-02-04 Jean-Pierre Roux
32 * FIX : Final solution (?) for icone embedded images
33 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
34 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
35 add groups 6002, 6004, 6006, to allow 'clean' parsing of
36 gdcmData/gdcm-MR-SIEMENS-16.acr1
37 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
38 to make full checking easier
40 2004-02-04 Benoit Regrain
41 * FIX : WriteEntries : coding style & logic in parameters
42 * FIX : Set the elements to create the DicomDir in a dictionary file
44 2004-02-03 Benoit Regrain
45 * gdcmDirList : to parse a hard drive directory in recursive (or not)
46 * gdcmDicomDir : add the load of directory
47 * Bug fix and print add-on
49 2004-02-03 Jean-Pierre Roux
50 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
51 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
52 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
53 * FIX gdcmParser.cxx : 'group length' elements are now considered
54 as integers, even for shadow groups, when file is Implicit VR
56 2004-02-02 Jean-Pierre Roux
57 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
59 of the last synonym :-(
60 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
62 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
63 * FIX taking into account the possible 7fe0,0010 multiplicity
64 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
65 to allow removal of references to 7fe0,0010, to deal with
66 ACR-NEMA images, when 0028,0200 is meaningfull
68 2004-01-31 Jean-Pierre Roux
69 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
70 no longer writes 'Un' on disk
71 * FIX SQ elements with actual length are now dealt with corectly
72 * FIX gdcmFile::WriteBase make the difference, for color images, between
73 the length (for Palette expanded omages)
74 and Raw Length (non expanded image + Palette)
75 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
76 (that broke Write). Replaced by UL.
77 Aware user will reload the field if he
78 thinks it's necesssary
80 2004-01-30 Jean-Pierre Roux
81 * gdcmParser::CheckSwap() now defaults the filetype to ACR
82 when 'dirty Acr' is found, to be compliant with the new
85 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
86 (no DOUBLE images in kosher DICOM,
87 but so usefull for people that miss them ;-)
89 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
90 DICOMDIR related utilities (not checked as Windoze compliant)
92 2004-01-28 Jean-Pierre Roux
93 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
95 2004-01-27 Jean-Pierre Roux
96 * gdcmParser constructor has a new boolean param,'ignore_shadow',
97 to allow skipping the shadow elements, to save memory space.
98 The TRUE value for this param has to be used
99 with a FALSE value for the 'enable_sequence' param.
100 ('public elements' may be embedded in 'shadow Sequences')
101 * gdcmHeader methods now deal with 'embedded icones images' in the header
102 (even when an 'icone image sequence' is announced by the
103 element (0x0088,0x0200), but there is NO icone at all ...
105 * gdcmHeader sometimes Image Location value doesn't follow
106 the supposed processor endianity (see gdcmData/cr172241.dcm).
109 * gdcmHeader add the method
110 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
111 to get *all* the Header Entries with the same tag.
112 GetHeaderEntrySameName is probabely *useless*
113 (no meaning : Name is *not* an identifier within the Dictionnary)
115 2004-01-26 Benoit Regrain
116 * Bug fix in the print of hexadecimal representations. Remove long fields
117 in the print and add a third level of print to print them
119 2004-01-23 Benoit Regrain
120 * Bug fix on field having a VR = 'UI'. Assume that is a string field
121 * Bug fix on test suite after remove the strip made on not string fields
122 * Split the IsReadable method between gdcmParser which test that the file
123 is dicom and gdcmHeader which test that it's an image file
125 2004-01-22 Benoit Regrain
126 * DicomDir : clean code, add methods, set variables in protected or private
127 * gdcmUtil : bug fix for the clean string method
129 2004-01-19 Benoit Regrain
130 * Add the use of shadow dictionaries
131 * bug fix and coding style
133 2004-01-19 Benoit Regrain
134 * src/gdcmFile.cxx : bug fix concerning the close of file
135 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
136 * Add the update of header entries using the shadow library
138 2004-01-19 Benoit Regrain
139 * removal of file gdcmHeader2.cxx
140 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
141 inheriting from gdcmParser. This split is to prepare the integration
143 * bug fix under python
145 2004-01-16 Jean-Pierre Roux
146 * removal of class gdcmHeaderEntrySet
147 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
148 * add file gdcmHeader2.cxx
149 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
151 2004-01-15 Benoit Regrain
152 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
153 entries created while parsing the header. Thus, they will be destroyed
154 when the gdcmDictSet will be destroyed
155 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
158 2004-01-15 Benoit Regrain
159 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
160 made a fatal error because of the memory release at the end of program.
161 The problem was in vtkGdcmReader::ExecuteData where we were allocate
162 some memory and vtk seems to have some problems with that.
163 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
165 2004-01-14 Benoit Regrain
166 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
167 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
168 * src/*.[h|cxx] : make changes due to class name changes
169 * gdcmPython/demo/*.py : bug fix due to method names
171 2004-01-13 Benoit Regrain
172 * src/*.[h|cxx] : coding style
173 * vtk/*.[h|cxx] : coding style
175 2004-01-13 Benoit Regrain
176 * gdcmPython/testSuite.py : test the readable flag of file for tests
177 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
178 It's lied to the stl compilation by MSVC (windows, always windows...)
179 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
181 2004-01-12 Benoit Regrain
182 * src/*.h : add comments
183 * src/gdcmDictSet.h : set the method BuildDictPath in public
184 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
185 directly setted in the source code
186 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
189 2004-01-09 Benoit Regrain
190 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
191 * setup.py : use a reference to gdcmVERSION
193 2004-01-07 Benoit Regrain
194 * Modification to compile with the distutils.
197 2003-12-10 Benoit Regrain
198 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
199 can use a gdcmHeaderHelper to load datas
200 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
201 made in the source code
203 2003-12-10 Benoit Regrain
204 * Update Windows projects and .cvsignore files
206 2003-11-12 Jean-Pierre Roux
207 *ENH gdcmHeader constructor has one more parameter (default value : false)
208 that allows the user to 'go inside' the SeQuences only
210 gdcmElValSet:Print takes it into account
212 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
213 *ENH: Update gdcmPython/CMakeLists
214 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
215 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
217 2003-11-10 Jean-Pierre Roux
218 *FIX : gdcmHeader::LoadElements is now based
219 on the ListTag listElem member,
220 not longer on the TagElValueHT tagHt member
221 *ENH : PrintPubElVal shows (temporarily) both results,
222 with the tagHt member and the listElem member.
223 (it's easier to 'see' the problems when using Printheader)
225 *FIX : old private member LgrElem is now splitted into
226 ReadLength : Length actually found on disk (updated only
227 if bug fixing is necessary), for internal
229 UsableLength : Updated by FixFoundLength, to fix a bug
230 or to allow Parser going on.
231 Will allow to re-write a kosher header when a SeQuence
232 with a length (not 0000) is found
233 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
234 because gdcmElValSet::Add does not update ListElem
237 2003-11-07 Jean-Pierre Roux
238 *FIX misstyping in Transfert Syntax name table
239 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
240 when they have an actual length (not 0000 nor FFFFF)
241 (Nobody should care of it, but DICOMDIR explorers)
243 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
244 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
246 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
247 *ENH: vtkGdcmReader now supports LUT !
248 (vtkgdcmViewer for now is not able to use them though)
250 2003-11-05 Jean-Pierre Roux
251 * in testSuite.py : new files names for checking the package
252 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
253 that returns the pixel area size to the *aware* (vtk) user
254 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
256 2003-11-05 Benoit Regrain
257 * in testSuite.py : Modify the rules for checking the paths
258 : Explicit error messages
259 * in __init__.py : Related modif
261 2003-11-03 Jean-Pierre Roux
262 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
263 to be used by aware (vtk) users that want to manage
264 LUT (and no to turn the PALETTE image into an RGB pixels one)
265 * GetPixelType now returns 8U for 24 Bits images
266 (vtkGdcmReader compliant)
268 2003-10-31 Jean-Pierre Roux
269 * Removal of *all* gdcmData images and add them again
270 in order to loose the 'history' of un-anonymised images
272 2003-10-31 Jean-Pierre Roux
273 *RMV : removal of useless jBitsInJsample.h
274 for both 8 and 12 Bits JPEG Lossy Libraries
276 2003-10-31 Jean-Pierre Roux
277 * ENH : Add the functions gdcmFile::GetImageDataRaw
278 gdcmFile::GetImageDataIntoVectorRaw
279 that act as GetImageData and GetImageDataIntoVector
280 except the making of an RGB Plane from Gray Plane + LUT
281 Intended to aware (vtk) users who know how to manage
284 GetLUTRGBA return a R,G,B,A LUT if any
285 lgrTotaleRaw gives the 'Raw' length
286 GetImageDataRaw returns the gray Plane
287 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
288 (They stay Grey, just like with other Dicom viewers :-(
290 2003-10-30 Jean-Pierre Roux
291 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
293 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
294 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
295 being coherents dicom files.
297 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
298 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
300 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
301 *ENH: Two steps is necessary to please VC++ compiler...
302 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
303 *ENH: Add include dir to medcon lib
304 *FIX: only one function is being exported for now !
305 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
307 2003-10-29 Jean-Pierre Roux
308 * adding gdcmHeader::GetLUTRGBA
309 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
310 --> Mathieu, the modif u're waiting for is not yet committed
311 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
313 2003-10-27 Jean-Pierre Roux
314 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
315 . 00191113.dcm DermaColorLossLess.dcm
316 MxTwinLossLess.dcm RadBWLossLess.dcm
317 * ENH: For version prior to vtkImageViewer2 -r 1.19
318 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
320 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
321 * Removal of ido stuff in CMakeLists.txt
323 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
324 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
325 * FIX: remove a call to ->Modified ... see comments
326 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
328 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
329 * FIX: Problem with path for libvtkgdcmPython
330 * ENH: Try adding a search script for python site-package
331 * RMV: Remove some file from medcon lib that are not necessary
332 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
333 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
334 * FIX: More pragma disable fro VC++,
335 I don't think I break something as it is also disable in VTK/ITK.
336 But it fasten debug compilation time.
338 2003-10-23 Jean-Pierre Roux
339 * gdcm now deals with 16 Bits Run Length Encoded images
340 (they are compressed as 2 planes images,
341 one for the high Bytes, the other for low Bytes)
343 2003-10-22 Jean-Pierre Roux
344 * Now CheckRead takes into account :
345 the bugged 'Leonardo' Siemens images
346 the XA images, sent thru the burning VPRO station
347 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
350 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
351 * FIX: When copying a Makefile.am to CMakeLists.txt
352 one should remove the '\'
354 2003-10-22 Jean-Pierre Roux
355 * in gdcmData adding a bugged 'Leonardo' Siemens image
356 (wrong lengths in header)
357 OK with gdcm, KO with the other viewers :-)
358 * add a GE dlx XA image, thru the VEPRO burning station
361 2003-10-21 Jean-Pierre Roux
362 * in gdcmData add the checkvtkgdcmViewer.sh shell script
363 for a brutal checking of vtkgdcmViewer compliance
365 2003-10-21 Jean-Pierre Roux
366 * add the files for 'xmedcon' Jpeg Lossless library
367 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
369 2003-10-21 Jean-Pierre Roux
370 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
372 2003-10-21 Jean-Pierre Roux
373 * garbage Siemens 'Leonardo' images dealt with
374 (the patch is easy to remove)
375 * cosmetic changes to avoid warnings
377 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
378 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
379 no need to press 'r' now.
381 2003-10-20 Jean-Pierre Roux
382 * upgrade of checkRead.sh checkWrite.sh according
383 to new Jpeg Lossless decompressor
384 * add US.3405.1.dcm, a genuine RGB medical file ...
385 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
386 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
388 2003-10-15 Jean-Pierre Roux
389 * general anonymisation in gdcmData
390 * adding the 'color files' from
391 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
392 * adding some well knowed bugged-header images
393 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
394 waiting for their inclusion in Python testsuite
396 2003-10-15 Jean-Pierre Roux
397 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
398 no longer seg faults when file is not found
400 2003-10-14 Jean-Pierre Roux
401 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
403 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
404 * TODO: *.in file to genereate a UseGDCM later
406 2003-10-14 Jean-Pierre Roux
407 * Some supposed-to-be Dicom Images have no preamble.
408 OpenFile takes it into account
409 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
410 * Missing elements added in dicomV3.dic
411 (just to be affraid : have a look at
412 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
413 and do it again next year ;->
415 2003-10-13 Jean-Pierre Roux
416 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
417 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
418 But there are NOT. It's fixed !
420 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
421 * FIX: "jpeglib.h" was not found on VC++
422 * FIX: vtkgdcm was not being installed
424 2003-10-10 Jean-Pierre Roux
425 * ENH : OpenFile closes the file if it *really* doesn't look like
426 an ACR-NEMA / DICOM one.
427 * FIX : testWrite no longer writes an empty file if the source file
429 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
432 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
433 * FIX: CMake generate now documentation
434 * ENH: out of source doc build !
435 * ENH: Generate both user and dev documentation
436 * ENH: Should work on windows too
437 * ENH: Only one doxygen config.in file is needed
438 * FIX: make install should be ok now on ùnix plateform
439 * FIX: PATH to dictionary was wrong (missing /)
440 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
442 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
443 * vtkGdcmReader is now able to read rgb dicom file.
444 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
445 * added a gdcmViewer to vtk test, use mouse to control
446 window level & window width
448 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
449 * CMake-ification of gdcm, we have now two build system
450 * FIX: on cygwin Wsock32 doesn't exist
451 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
453 2003-10-06 Emanuel Ollart
454 * FIX : compilation process wad broken.
455 Changed gdcmViewer_sources to vtkgdcmViewer_sources
457 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
458 * change gdcmViewer -> vtkgdcmViewer
459 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
461 2003-10-06 Jean-Pierre Roux
462 * FIX :A few nasty patches to allow the reading of a lot of nasty images
463 ( e.g : well known GE images with a wrong elem length,
464 : Philips MRI Images with a wrong Huffman table)
465 * still to be done : allow the reading of bugged LEONARDO Siemens images
467 2003-10-03 Jean-Pierre Roux
468 * Odd length strings are padded with '\0' (not with spaces,
469 to remain compliant with already defined strings,
470 like Transfert Syntax UID and others)
472 2003-10-03 Jean-Pierre Roux
473 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
474 to allow displaying RGB images (not only by affim ;-)
476 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
477 * vtkGdcmReader is now able to read rgb dicom file.
478 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
480 2003-10-03 Jean-Pierre Roux
481 * A few nasty patches to allow the reading of a lot of nasty images
482 ( e.g : well known GE images with a wrong elem length,
483 : Philips MRI Images with a wrong Huffman table)
484 * still to be done : allow the reading of bugged LEONARDO Siemens images
486 2003-10-03 Jean-Pierre Roux
487 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
489 2003-10-03 Jean-Pierre Roux
490 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
491 to allow displaying RGB images (not only by affim ;-)
493 2003-10-03 Jean-Pierre Roux
494 * gdcmFile::GetImageDataIntoVector now
495 - deals with MultiFrames MultiFragments Run Length Encoded files
496 - deals with YcBcR (YBR_FULL) files
497 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
498 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
501 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
502 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
503 Two reasons: - clear things
504 - third parties acces gdcm through header files, so won't
505 suffer anymore VC++ complains
506 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
507 * add argv[1] in testvtkGdcmReader.cxx
510 2003-09-24 Jean-Pierre Roux
511 * The lines are now eigthy characters long.for
512 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
514 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
515 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
516 char* to std::string. Thus, the use of strdup becomes useless. (see
517 previous commis of Malaterre)
518 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
519 before the last Malaterre's commit.
521 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
522 * This commit should fix the Debug building under VC++, the problem
523 was mainly a mixture of debug and release lib being loaded at startup.
524 * I also remove a depency to a specific C function: strdup. Because I had
525 to force the link to msvcrtd (whereas strdup is in libc).
527 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
528 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
529 located in the gdcmCommon.h file. All use of reference of tha has been
530 changed to now use the variable GDCM_UNFOUND.
532 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
534 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
535 Dicom dictionary. The test suite can now be run again. Note:
536 I'm note very happy with the " (RET)" changes. I believe this
537 RETAINED comment should be dropped when parsing the dictionary.
540 - AUTHORS updated and now in alphabetical order
541 * Makefile.am now exports gdcm.dsw for Windoze users.
543 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
544 * cygwin complains about missing std:: in subdir Test/
546 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
547 * remove some methods that are now in gdcmHeaderHelper
549 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
550 * vtkGdcmReader set spacing and origin correctly
552 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
553 * Fix a few delete/delete[] mismatch
555 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
556 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
557 interpretation to data given by gdcmHeader. For instance there are
558 heuristics to get informations (look at different places).
559 * it also include a specific class: gdcmSerieHeaderHelper devoted to
560 sorting DICOM images based on different strategies.
561 * modified Makefiles accordingly.
563 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
564 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
565 when building in debug mode
566 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
567 src/win32/gdcmdll.dsp
568 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
570 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
571 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
573 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
574 * src/win32/libgdcmjpeg12.dsp was not dos format
575 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
576 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
578 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
579 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
581 * src/gdcmFile.cxx : bug fix in affectation type
582 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
583 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
584 * Modifs of MVSC projects to compile them. Not concerning 2 identic
585 symbols... future problem ?
587 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
588 * src/win32/libgdcmijpeg12.dsp was missing
589 * modified gdcm.dsw accordingly
591 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
592 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
594 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
595 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
596 commit of JPR (before his hollidays to facilitate our work).
597 * setup.py : bug fix in code. Modifications made while the last commit
598 of JPR. The code hasn't been tested before the commit... it's so
599 useless to make that (for best programmer that is JPR) !!!
601 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
602 * tagged the current version as Version0_3 (i.e. version 0.3)
604 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
605 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
606 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
607 * *.dsp : modifications to use new libgdcmijpeg8 library
608 * setup.py : bug fix on VTKPATH variable
609 * PACKAGER : adding all concerning windows
611 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
612 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
614 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
615 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
616 test suite reported error.
617 * PACKAGER file added (describes what a packager must do when
618 packaging a new release).
619 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
620 * configure.in: upgraded version number to 0.3.0
621 * fixing build of rpm (through rpm -ta):
622 - Doc/Makefile.am exports proper doxygen files
623 - src/jpeg/libijg8/Makefile.am exports the include files.
625 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
626 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
627 * src/gdcmHeader.h : formatting code
629 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
630 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
631 We were obtaining error message from vtk. Now, creation of file list
632 is made in an internal list to prevent this problem.
633 Bug fix when output is empty.
634 Bug fix in update of progress value. Previous commit for this was a bad
636 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
638 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
639 * src/gdcmHeader.h : added method to get the file name
640 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
641 files. Added method to remove all files on the input
642 Added FIXME comment concerning the bad parsing of header made by
643 ExecuteInformation method (in ExecuteData method)
645 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
646 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
647 when using make instal.
648 * src/gdcmFile.cxx : bug fix under Window after JPR commit
649 RQ : the JPR doesn't appear in the ChangeLog... normal for him
651 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
652 * setup.py : adding include dir of jpeg lib to compile all sources
653 * */Win32/*.dsp : JPR fix for windows compilation
655 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
656 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
658 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
659 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
661 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
662 * setup.py is again effective on un*x (takes into account the
663 addon of the jpeg library)
664 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
665 * Doc/Doxy* updated (includes above enhancements)
666 * INSTALL now points to web documentation
668 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
669 * src/gdcmHeader.h doesn't make unnecessary reference to
671 * gdcmPython/Makefile.am now avoids calling the wrappers for the
673 * src/gdcm*.[cxx|h] :
674 - to allow compilation with gcc 3.x
675 -- clean up of STL usage (added explicit usage of std::)
676 -- small fixes on exceptions.
677 Note: linking not tested !
678 - clean of doxygen comments to avoid warnings at documentation
680 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
681 dependent convertion).
683 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
684 * Clean up of previous JPR garbage commit (not even commented in the
686 - Test/Makefile.am removed the reference to unexisting testTS.cxx
687 - moved all jpeg related files from src to src/jpeg/libijg8, with
688 addition/modification of Makefile.am and configure.in.
689 - the testSuite is still brain damage (not guilty).
691 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
692 * WrapVTK.py : modifications to get correctly vtk source files to
694 * vtk/vtkGdcmReader.cxx : modification for an already existing name
695 (FileName -> Filename)
697 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
698 * vtk/vtkGdcmReader.[cxx/h]:
699 - UpdateProgress method should now be effective
700 - removed the limitation on having only images loaded (as opposed
702 - when building a stack of images/volume, a lesser number of
703 gdcmHeader and gdcmFile instances should be used (hopefully
704 accelerating things).
705 - when building a stack of images/volumes, files which are not
706 loadable (wrong path-filename, wrong permissions on existing file,
707 or file not parsable by gdcm) are replaced with a black image
708 in the stack (for the caller to notice the problem).
710 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
711 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
713 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
714 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
715 between standard library (std) and vtk library (problems are found
716 under Windows... thanks Windows !)
718 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
719 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
721 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
723 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
724 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
726 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
727 * When compiling with distutils (see setup.py) the C++ compiler is
728 called with different flags than the default ones (with automake).
729 In order to fix all those warning, I compiled gdcm with the command
730 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
731 and went for warning fixes:
732 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
733 up from unused variables.
734 - vtk/vtkGdcmReader.cxx: potential bug fix.
735 * src/gdcmHeader.h: Doxygen warning cleanup
737 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
739 - typemaps correction to take into account the systematic replacement
740 of "using namespace std" with std:: prefix e.g. std::list,
741 std::string... (cf changes of 2003-05-21).
742 - gdcmGlob global variable of type gdcmGlobal (defined in
743 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
744 exported to Python a as cvar.
745 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
746 and GetPubDictTagNamesByCategory() as a replacement for deprecated
747 gdcmDictSet.GetPubDictTagNames() and
748 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
750 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
751 with the above changes.
753 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
754 * setup.py, manifest.in : bug fix under linux
756 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
757 * Modification of setup.py to compile vtk part too. Then, we have 2
758 wrappers which must work with same distutils. For that, we have a
759 generic distutils in distusiltsWrapping.py ; with :
760 - build_extWrap class to wrap generically all extensions,
761 - ExtensionWrap base class for all wrapping extension that contains
763 - Wrapper interface which wrap sources
764 + In WrapSwig.py we have extension and wrapper for Swig
765 + In WrapVTK.py we have extension and wrapper for VTK
766 * MANIFEST.in : modifications to consider vtk directory and new python
767 files for compilation
769 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
770 * Added python wrappers of vtkGdcmReader vtk class (see the
771 source in vtk/vtkGdcmReader.cxx) :
772 - vtk/Makefile.am now builds a library
773 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
774 python library (as opposed to _gdcm.so wich are the python
775 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
776 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
778 - configure.in has an additional flag --enable-vtk that needs
779 to be set to enable compilation of vtk related code, that is:
780 + vtk/vtkGdcmReader.so and
781 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
782 + gdcmPython/vtkgdcmPython.so (see above)
783 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
784 be read when compressed or when HighBit + 1 != BitsStored),
785 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
786 the usage of the python wrapper of vtkGdcmReader vtk class.
787 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
788 * src/*.[h] all occurences of stl classes are now prefixed with
789 std::, and all occurences of "using namespace std;" where removed.
790 This is to avoid pollution of global namespace in included files.
791 Apparently vtk does not avoid this pitfall: when using both
792 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
793 collision of various stl members (principally cout...).
794 * gdcmPython/testSuite.py now cleanly removes temprory generated
796 * gdcmPython/gdcm.i now declares a typemap for std::string (to
797 comply with above changes)
799 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
800 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
801 * vtk/vtkGdcmReader.cxx now properly inports the image in the
802 vtk data structure (an image Flip was required).
803 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
804 * cosmetic changes in documentation.
806 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
807 * src/gdcmHeader.cxx: the constructor no longer exits when an
808 unexisting file is given as argument.
809 * The subdirectory Data (containing all the images used for the
810 test suite) is not part of this repository anymore. A new module
811 containing those images is now available at
812 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
813 with the name gdcmData.
814 All the python scripts (including the package initialisation file
815 gdcmPython/__init__.py) were adapated to take this change into
816 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
818 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
819 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
820 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
821 demo of the usage of this class.
822 Compilation of this vtk part is only done when using the --enable-vtk
823 at configure (or autogen.sh) stage.
825 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
826 * More memory link related corrections and documentation fixes.
828 - maximum info is obtained with a command of the form:
829 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
830 --show-reachable=yes PrintHeader
831 - the remaining reachable blocks seem to come from the STL
832 allocation scheme through the usage of map and list. It looks
833 like this memory cannot be freed but it is not a memory leak
834 (in fact further invocation to the STL would recollect the
835 unused memory allthough it cannot explicitely be freed).
836 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
837 of displaying an image parsed with gdcm and displayed with VTK.
838 Note: some images don't seem to work e.g.
839 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
840 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
841 Allthough this weakens the semantics, it is a ditch attempt to
842 make gdcm more thread friendly.
844 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
845 * Memory link hunt (by using valgrind through the command
846 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
847 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
848 gdcmHeader::_dicom_vr.
849 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
850 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
852 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
854 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
855 * src/Makefile.am now exports all the necessary include files at
859 * UpdateGroupLength replaced by new one
862 * UpdateGroupLength re-written using H-Table
863 (named UpdateGroupLengthNew untill checks are over)
865 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
866 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
867 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
869 - gdcmHeader::GetPubElValSet removed.
870 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
871 UpdateGroupLength, WriteElements, Write.
872 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
873 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
874 carried the same semantics.
875 - src/gdcmHeaderIdo.cxx changed accordingly.
876 - gdcmFile::WriteBase now regroups all the codes from previous
877 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
878 - enum FileType moved to gdcmCommon.h
879 * src/gdcmHeader.cxx AddDefault trashed
881 * getimageDataSize now calls gdcmGetXSize
882 * Test/*.cxx changed to agree with above changes
884 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
885 * src/gdcmHeader.h: LoadElements() is not a public method anymore
886 (to avoid double call by end user).
887 * Test/*.cxx LoadElements() doesn't need to be called explicitely
888 by end user, since gdcmHeader::gdcmHeader now handles it.
890 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
891 * gdcm/Doc many doxygen changes:
892 - Doxyfile now has two different versions, DoxyfileUsers that generates
893 the html.users end users oriented documentation and
894 DoxyfileDeveloppers that generates the html.developper developper
895 oriented documentation.
896 - README changed accordingly
897 - requirement.txt removed (old design info moved to TODO).
898 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
899 DoxyMainPage.txt, DoxyPython.txt provide more information.
900 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
901 be updated by simply regenerating the docs with doxygen and copying
902 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
903 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
904 all the tests in the form "if (<map>.count() >1)" were removed.
905 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
906 ill-formed documentation sections.
907 * src/gdcmHeader.cxx: ditto
909 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
910 * setup.py fixed for un*x (needed macro for stdint.h)
911 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
912 un*ces with sh-utils test utility.
913 * gdcmPython/demo/test.py renamed to PrintHeader.py
914 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
915 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
916 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
917 * src/gdcm*.cxx JPR's bad inclusion fixed.
919 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
920 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
921 * gdcmPython/demo/test.py changed accordingly.
923 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
924 * gdcmPython/Makefile.am fixed linking against libstdc++
925 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
926 * Swig subdir (historical tests of swig version 1.3.17++) removed
927 * Test/testChangeEntete.cxx some lines commented out in order to make
929 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
930 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
932 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
933 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
934 hence the user doesn't need this explicit call.
935 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
936 i.e. LoadElements() call removed.
937 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
938 - src/Makefile.am declares the proper flag for g++.
939 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
940 for adding user defined new tags.
941 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
942 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
943 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
945 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
946 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
947 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
948 src/Makefile.am : the project should properly compile and install
949 with the autotools, included the python wrappers part.
950 * gdcm.spec.in : added a spec file for RPM packaging.
952 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
953 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
955 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
956 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
957 to exported to the environement (see gdcmPython/testSuite.py
959 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
960 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
961 ElValue class renamed to gdcmElValue for obvious consistency reasons.
962 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
963 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
965 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
966 * gdcmPython/__init__.py doesn't crash anymore when running in
967 in InstallMode or PreInstallMode but with an environement given
968 value of GDCM_DICT_PATH.
969 * src/gdcmDictSet.[cxx/h] coding style.
971 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
972 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
973 * src/gdcm.h general comments moved to TODO, and README
974 * src/gdcm.h should now be seen as a user commodity (including it
975 should suffice to fully use gdcm). It is nowhere including within
976 any of the kernel files src/*.cxx and src/*.h.
978 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
979 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
980 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
982 * src/gdcm*.cxx only include their corresponding include file
983 (as opposed to gdcm.h)
984 * gdcmPython/gdcm.i changed accordingly
985 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
986 the autogen.sh generated "make snapshot" command to work.
987 * autogen.sh removed history related references to crea package.
989 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
990 * distutilsSwigCPlusPlus.py work around some swig portability
993 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
994 * Eventually, python/gdcmPython was renamed to gdcmPython. This
995 was done in a last ditch attempt to get setup.py _really_
996 operationnal. The python/gdcmPython layaout add the advantage
997 of hidding away the python related distutils specific files
998 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
999 Alas, the src directory was out of scope (i.e. it's relative
1000 position to setup.py was ../src) which made things impossible to
1001 handle (see previous version of python/setup.py). Crossing fingers...
1003 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1004 * python/setup.py now works on Un*x. (harder than I thougth)
1005 * python/distutilsSwigCPlusPlus.py can now have include files
1006 among the list of sources.
1008 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1009 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
1010 * modifications in MSVC projects
1012 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1013 * As stated by the first lines of Test/ExceptionAndPython/README, it
1014 looks like we can move back to original usage of exception within
1015 src/gdcm* and hence remove the errno stuff that was introduced
1016 as a quick and dirty fixture of this problem (added to the TODO).
1017 * Doc/Doxyfile configuration file for Doxygen and corresponding
1018 README file for usage added.
1019 * Test/testWrite.cxx added. This new test comes from a split of
1020 test.cxx that is now reverted to its original purpous i.e.
1021 testing the proper parsing of a Dicom related file.
1022 testWrite.cxx concentrates on testing the IO part of gdcm.
1023 * Test/bug1.cxx (containing a bug on WIn32) added.
1024 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1025 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1026 whose purpose is to publish the content of the TagNames of the
1027 Dicom public dictionnary were not accessible without an
1028 instance of class gdcmHeader.
1029 - those methods are now static methods of gdcmDictSet and hence
1030 require no instances at all to be invocated.
1031 - within gdcmDictSet this change required to change some method
1032 to class methods (i.e. are now static) among which SetDictPath
1033 (renamed to BuildDictPath) and LoadDefaultPubDict.
1034 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1035 the above changes by calling the new method classes of gdcmDictSet.
1036 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1037 the above to be effective.
1038 * python/gdcmPython: in order to wrap properly the above changes
1039 for Python, swig version now needs to be > 1.3.17.
1040 * python/gdcmPython/Makefile fixed to adapt itself to new
1041 configure/make shema introduced by Johan Montagnat (thanks for the
1042 contribution). Alas this Makefile cannot be turned into a proper
1043 Makefile.am without some heavy changes in the configure.in
1044 (for python dectection).
1045 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1046 now avoids publishing the empty entries.
1048 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1049 * python/setup.py : bug fix concerning install under windows
1050 ExtraPath reused :-P
1051 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1053 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1054 * Dicts/dicomV3.dic : remove double spaces !!!
1055 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1056 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1059 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1060 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1061 method. Doxygenation.
1062 * src/gdcm.h clean up of JPR spurious comments.
1064 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1065 * python/distutilsSwigCPlusPlus.py now properly collects the
1066 shadow classes generated by "swig -c++" (gdcm.py in our case)
1067 when using "python setup.py install".
1068 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1069 reexports the working classes.
1070 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1071 by the classical C errno scheme. This is to prevent an obscure
1072 behavior of the python wrappers when importing wxPython.wx prior
1073 to gdcmPython (which ended up in an abort call). An illustration
1074 of this oddity can be found in the Test/ExceptionAndPython
1075 subdir (see the README file). This problem probably due to
1076 an combination of g++ and dynamic loading.
1077 * added Test/ExceptionAndPython (see above)
1079 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1080 * Changed the layout of the python part to avoid bloating main
1081 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1082 i.e. the distutils arsenal. All the python related stuff is
1083 again in a python subdir, but the package itself is now in
1085 * setup.py was cleaned up:
1086 - pythonIncludePath removed
1087 - python setup.py bdist target is now functional.
1088 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1089 collision with other packages). gdcmPython/demo/*.py changed
1092 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1093 * python subdir moved to gdcmPython (preparation of distutils packaging).
1094 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1095 distutils installer is operational.
1096 * - gdcmPython/__init__.py now properly loads the swig generated
1097 shadow classes (from gdcm.py).
1098 - gdcmPython/demo/*.py changed to import the package gdcmPython
1099 instead of gdcmPython/demo/load.py.
1100 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1102 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1103 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1104 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1105 entries within the associated public Dicom dictionary resp. the same
1106 information but sorted by the fourth field (PAT, IMG, DIR) of the
1108 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1109 are now in the "???" group.
1110 - python/gdcm.i changed accordingly,
1111 - python/demo/printGroupedPublicDict.py added, that gives an example
1112 of the above new functionalities in Python.
1114 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1115 * src/gdcm.h, gdcmHeader.cxx:
1116 - historic references to glib's g_malloc and g_free (#defined)
1117 were definitively removed.
1118 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1119 * src/gdcmElValSet.cxx:
1120 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1121 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1122 - GetElValue(string) renamed to GetElValueByName.
1123 - Added GetElementByName(string).
1124 * src/gdcmHeader.cxx: added
1125 - GetPubElValRepByNumber(guint16, guint16)
1126 - GetPubElValRepByName(string)
1127 - GetShaElValRepByNumber(guint16, guint16)
1128 - GetShaElValRepByName(string)
1129 - GetShaElValByNumber(guint16, guint16)
1130 - GetShaElValRepByName(string)
1131 - GetElValRepByNumber(guint16, guint16)
1132 - GetElValRepByName(string)
1133 - GetElValByNumber(guint16, guint16)
1134 - GetElValRepByName(string)
1135 * Doc/requirements.txt added.
1137 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1138 * Test/Makefile building now depends on the one of libgdcm.so
1139 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1140 pixel data) aware which enables finding the address (offset) of
1141 the pixel data of JPEG encoded DICOM files. This leaves only a single
1142 file in the testSuite whose pixel data address (offset) is unknown.
1143 * python/testSuite.py changed accordingly.
1145 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1146 * VC++ has some strong limitations when working with the STL, as stated
1147 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1148 "Also note that some STL containers (map, set, queue, list, deque)
1149 cannot be exported. [...]
1150 Some STL classes contain nested classes. These classes can not
1152 This is caused by a designed limitation that once a template
1153 class is instantiated, it can not be re-instantiated and
1155 Since our usage of map<> is ubiquitous in gdcm, this "designed
1156 limitation" of VC++ is a pitfall.
1157 Hence the Python wrappers of gdcm cannot be incrementally linked
1158 against the c++ dynamic library. The dirty but only workaround is
1159 to forget about incremental link of dynamic libraries and to generate
1160 the Python wrappers library with the inclusions of the underlying C++
1162 The following modifications concern this matter on Win32/VC++:
1163 - wrapping python correct with standalone wrapped dll (don't use separate
1164 dll under windows !!!!)
1165 - python21_d debug mode enabled (ask Frog how to use it :-)
1166 - NO problem with having an STL member of class for example string in C++
1167 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1168 - Python test of dcmlib in Python is ok under windows on a large set
1170 * removed glib references
1171 * typedef's inserted in gdcm.i for correct swig type management
1173 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1174 * python/demo/*.py load.py extracted from test.py. Added explore.py
1175 that only displays required tags and testAll.py that parses all
1176 the files of the testsuite without using unittest.
1177 * python/testSuite.py other additional test on new files added.
1178 * Data/* new test files added accordingly to the testSuite.
1179 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1180 the vr in the file differs from the one of the dictionary.
1182 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1183 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1184 values, but limits itself to values which are below a user specified
1185 size (by default 1024 bytes).
1186 * python/gdcm.i : elements not loaded (because their size is above the
1187 user specified treshold) are exported with their TagKey as key of the
1188 python dictionary. This enables the testsuite to make some checks
1189 on the unloaded elements (since we have their offset and size).
1190 * python/testSuite.py
1191 - now tests for the existence and proper value of the pixel data
1192 - two new examples added.
1193 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1195 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1196 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1197 aware. See the strategy comments in gdcmHeader::FindeLength().
1198 * Test/test.cxx now accepts a filename as first argument.
1199 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1200 * python/testSuite.py changed to integrate test on above files.
1202 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1203 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1204 the vr was also RET.
1205 * python/testSuite.py more tests added.
1207 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1208 * python/testSuite.py unittest test suite added (uses Data)
1209 * Data/* dcm and acr files for the test suite.
1210 * glib dependance removed from un*x version. We now use ISO C99
1211 7.18 Integer types (see stdint.h)
1212 - python/Makefile, src/Makefile src/gdcm.h
1213 * src/ when an explicit vr (like dicom files) suddenly poped an
1214 implicit element we use to mark the underlying DictEntry of the
1215 concerned ElValue with "Implicit". This strategy was damageable
1216 too the public or provite dictionaries, since some of their vr
1217 would be changed. Since Header::FindLength heavily relies on the
1218 detection by Header::FindVR of falsely explicit elements, I
1219 added an extra ImplicitVr member to ElValue (boolean).
1220 The rest of the changes we the necessary adaptations.
1222 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1223 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1225 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1227 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1228 * Adaptation for porting to VC++:
1230 o forced to use std namespace (for string to be known)
1231 o all class use __declspec export style on WIN32
1232 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1233 (in stdlib.h on Win32 but in std:: for gcc)
1234 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1235 variable GDCM_DICT_PATH.
1236 * src/gdcmHeader.cxx verbose comments made discrete.
1238 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1239 * python/gdcm.i: added a typemap that converts a C++ hashing table
1240 to native Python dictionary.
1241 * python/demo/test.py:
1242 - now uses the native dictionary for exploration of gdcmHeader.
1243 - takes an optional filename argument (the file to parse).
1244 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1245 PubElVals hashing table.
1246 * Dicts/dicomV3.dic removed error prone trailing spaces.
1248 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1249 * Python wrapping process moved away from src/Makefile to
1250 newly created python/Makefile (as well as gdcm.i)
1251 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1252 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1253 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1254 from the environement variable GDCM_DICT_PATH (when existing).
1255 * src/gdcmDict::GetTag bug fix.
1257 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1258 * Straightforward temporary fixes for swig to build the python wrappers.
1259 src/Makefile now has a python working entry [by working we mean
1260 that we can import de shadow classes without errors].
1262 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1263 * hashtest.cxx removed (since allready in Test)
1264 * src/gdcmlib.h renamed to src/gdcm.h
1265 * src/dcm.i renamed to src/gdcm.i
1266 * src/Makefile prepared for python wrapping
1268 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1269 * src/gdcmHeader.cxx :
1270 - Parsing of header is now separated from loading of element values
1271 (see gdcmHeader::LoadElements).
1272 - general clean up of hopefully all file access (creation of
1273 ReadInt16 and ReadInt32)
1275 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1276 * src/gdcmHeader.cxx :
1277 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1279 - SetLgrElem renamed to SetLength
1280 - GetLgrElem renamed to GetLength
1281 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1282 * src/gdcmElValSet.cxx fixed both GetElValue methods
1283 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1284 due to IdoDude was cleaned out.
1286 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1287 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1288 concentrates on finding the value representation (when it exists).
1289 RecupLgr now only finds the element value length, and it avoids
1290 returning the unecessary skL (skipped length).
1291 Also, offsetCourant was simply removed (with taille_fich) since
1292 it was redundant with the File position internals (by using
1293 ftell and fseek). This also made skL (see above in RecupLgr) usage
1295 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1296 on the libido specificities which are handled through class
1298 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1301 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1302 * Truckload of changes. Parsing of header is barely functional
1303 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1305 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1306 * src/gdcmHeader.cxx many addons of low level methods
1308 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1309 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1310 and _IdDcmSWAP_LONG.
1312 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1313 * This corresponds to all the changes decided at the meeting of
1314 May 23 2002. Needless to say we are running late...