1 2004-02-05 Benoit Regrain
2 * ENH : add methods in gdcmObject to get the hash table or the list of
4 * FIX : wrapping python for ListPatient, ListStudy, ListSerie, ListImage
6 2004-02-04 Benoit Regrain
7 * FIX : even length for some strings when writting the dicom dir
8 * FIX : sort the images in the dicom dir
9 * FIX : Bug fix for python use of dicom dir
12 2004-02-04 Jean-Pierre Roux
13 * FIX : Final solution (?) for icone embedded images
14 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
15 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
16 add groups 6002, 6004, 6006, to allow 'clean' parsing of
17 gdcmData/gdcm-MR-SIEMENS-16.acr1
18 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
19 to make full checking easier
21 2004-02-04 Benoit Regrain
22 * FIX : WriteEntries : coding style & logic in parameters
23 * FIX : Set the elements to create the DicomDir in a dictionary file
25 2004-02-03 Benoit Regrain
26 * gdcmDirList : to parse a hard drive directory in recursive (or not)
27 * gdcmDicomDir : add the load of directory
28 * Bug fix and print add-on
30 2004-02-03 Jean-Pierre Roux
31 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
32 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
33 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
34 * FIX gdcmParser.cxx : 'group length' elements are now considered
35 as integers, even for shadow groups, when file is Implicit VR
37 2004-02-02 Jean-Pierre Roux
38 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
40 of the last synonym :-(
41 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
43 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
44 * FIX taking into account the possible 7fe0,0010 multiplicity
45 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
46 to allow removal of references to 7fe0,0010, to deal with
47 ACR-NEMA images, when 0028,0200 is meaningfull
49 2004-01-31 Jean-Pierre Roux
50 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
51 no longer writes 'Un' on disk
52 * FIX SQ elements with actual length are now dealt with corectly
53 * FIX gdcmFile::WriteBase make the difference, for color images, between
54 the length (for Palette expanded omages)
55 and Raw Length (non expanded image + Palette)
56 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
57 (that broke Write). Replaced by UL.
58 Aware user will reload the field if he
59 thinks it's necesssary
61 2004-01-30 Jean-Pierre Roux
62 * gdcmParser::CheckSwap() now defaults the filetype to ACR
63 when 'dirty Acr' is found, to be compliant with the new
66 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
67 (no DOUBLE images in kosher DICOM,
68 but so usefull for people that miss them ;-)
70 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
71 DICOMDIR related utilities (not checked as Windoze compliant)
73 2004-01-28 Jean-Pierre Roux
74 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
76 2004-01-27 Jean-Pierre Roux
77 * gdcmParser constructor has a new boolean param,'ignore_shadow',
78 to allow skipping the shadow elements, to save memory space.
79 The TRUE value for this param has to be used
80 with a FALSE value for the 'enable_sequence' param.
81 ('public elements' may be embedded in 'shadow Sequences')
82 * gdcmHeader methods now deal with 'embedded icones images' in the header
83 (even when an 'icone image sequence' is announced by the
84 element (0x0088,0x0200), but there is NO icone at all ...
86 * gdcmHeader sometimes Image Location value doesn't follow
87 the supposed processor endianity (see gdcmData/cr172241.dcm).
90 * gdcmHeader add the method
91 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
92 to get *all* the Header Entries with the same tag.
93 GetHeaderEntrySameName is probabely *useless*
94 (no meaning : Name is *not* an identifier within the Dictionnary)
96 2004-01-26 Benoit Regrain
97 * Bug fix in the print of hexadecimal representations. Remove long fields
98 in the print and add a third level of print to print them
100 2004-01-23 Benoit Regrain
101 * Bug fix on field having a VR = 'UI'. Assume that is a string field
102 * Bug fix on test suite after remove the strip made on not string fields
103 * Split the IsReadable method between gdcmParser which test that the file
104 is dicom and gdcmHeader which test that it's an image file
106 2004-01-22 Benoit Regrain
107 * DicomDir : clean code, add methods, set variables in protected or private
108 * gdcmUtil : bug fix for the clean string method
110 2004-01-19 Benoit Regrain
111 * Add the use of shadow dictionaries
112 * bug fix and coding style
114 2004-01-19 Benoit Regrain
115 * src/gdcmFile.cxx : bug fix concerning the close of file
116 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
117 * Add the update of header entries using the shadow library
119 2004-01-19 Benoit Regrain
120 * removal of file gdcmHeader2.cxx
121 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
122 inheriting from gdcmParser. This split is to prepare the integration
124 * bug fix under python
126 2004-01-16 Jean-Pierre Roux
127 * removal of class gdcmHeaderEntrySet
128 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
129 * add file gdcmHeader2.cxx
130 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
132 2004-01-15 Benoit Regrain
133 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
134 entries created while parsing the header. Thus, they will be destroyed
135 when the gdcmDictSet will be destroyed
136 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
139 2004-01-15 Benoit Regrain
140 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
141 made a fatal error because of the memory release at the end of program.
142 The problem was in vtkGdcmReader::ExecuteData where we were allocate
143 some memory and vtk seems to have some problems with that.
144 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
146 2004-01-14 Benoit Regrain
147 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
148 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
149 * src/*.[h|cxx] : make changes due to class name changes
150 * gdcmPython/demo/*.py : bug fix due to method names
152 2004-01-13 Benoit Regrain
153 * src/*.[h|cxx] : coding style
154 * vtk/*.[h|cxx] : coding style
156 2004-01-13 Benoit Regrain
157 * gdcmPython/testSuite.py : test the readable flag of file for tests
158 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
159 It's lied to the stl compilation by MSVC (windows, always windows...)
160 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
162 2004-01-12 Benoit Regrain
163 * src/*.h : add comments
164 * src/gdcmDictSet.h : set the method BuildDictPath in public
165 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
166 directly setted in the source code
167 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
170 2004-01-09 Benoit Regrain
171 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
172 * setup.py : use a reference to gdcmVERSION
174 2004-01-07 Benoit Regrain
175 * Modification to compile with the distutils.
178 2003-12-10 Benoit Regrain
179 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
180 can use a gdcmHeaderHelper to load datas
181 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
182 made in the source code
184 2003-12-10 Benoit Regrain
185 * Update Windows projects and .cvsignore files
187 2003-11-12 Jean-Pierre Roux
188 *ENH gdcmHeader constructor has one more parameter (default value : false)
189 that allows the user to 'go inside' the SeQuences only
191 gdcmElValSet:Print takes it into account
193 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
194 *ENH: Update gdcmPython/CMakeLists
195 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
196 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
198 2003-11-10 Jean-Pierre Roux
199 *FIX : gdcmHeader::LoadElements is now based
200 on the ListTag listElem member,
201 not longer on the TagElValueHT tagHt member
202 *ENH : PrintPubElVal shows (temporarily) both results,
203 with the tagHt member and the listElem member.
204 (it's easier to 'see' the problems when using Printheader)
206 *FIX : old private member LgrElem is now splitted into
207 ReadLength : Length actually found on disk (updated only
208 if bug fixing is necessary), for internal
210 UsableLength : Updated by FixFoundLength, to fix a bug
211 or to allow Parser going on.
212 Will allow to re-write a kosher header when a SeQuence
213 with a length (not 0000) is found
214 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
215 because gdcmElValSet::Add does not update ListElem
218 2003-11-07 Jean-Pierre Roux
219 *FIX misstyping in Transfert Syntax name table
220 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
221 when they have an actual length (not 0000 nor FFFFF)
222 (Nobody should care of it, but DICOMDIR explorers)
224 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
225 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
227 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
228 *ENH: vtkGdcmReader now supports LUT !
229 (vtkgdcmViewer for now is not able to use them though)
231 2003-11-05 Jean-Pierre Roux
232 * in testSuite.py : new files names for checking the package
233 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
234 that returns the pixel area size to the *aware* (vtk) user
235 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
237 2003-11-05 Benoit Regrain
238 * in testSuite.py : Modify the rules for checking the paths
239 : Explicit error messages
240 * in __init__.py : Related modif
242 2003-11-03 Jean-Pierre Roux
243 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
244 to be used by aware (vtk) users that want to manage
245 LUT (and no to turn the PALETTE image into an RGB pixels one)
246 * GetPixelType now returns 8U for 24 Bits images
247 (vtkGdcmReader compliant)
249 2003-10-31 Jean-Pierre Roux
250 * Removal of *all* gdcmData images and add them again
251 in order to loose the 'history' of un-anonymised images
253 2003-10-31 Jean-Pierre Roux
254 *RMV : removal of useless jBitsInJsample.h
255 for both 8 and 12 Bits JPEG Lossy Libraries
257 2003-10-31 Jean-Pierre Roux
258 * ENH : Add the functions gdcmFile::GetImageDataRaw
259 gdcmFile::GetImageDataIntoVectorRaw
260 that act as GetImageData and GetImageDataIntoVector
261 except the making of an RGB Plane from Gray Plane + LUT
262 Intended to aware (vtk) users who know how to manage
265 GetLUTRGBA return a R,G,B,A LUT if any
266 lgrTotaleRaw gives the 'Raw' length
267 GetImageDataRaw returns the gray Plane
268 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
269 (They stay Grey, just like with other Dicom viewers :-(
271 2003-10-30 Jean-Pierre Roux
272 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
274 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
275 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
276 being coherents dicom files.
278 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
279 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
281 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
282 *ENH: Two steps is necessary to please VC++ compiler...
283 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
284 *ENH: Add include dir to medcon lib
285 *FIX: only one function is being exported for now !
286 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
288 2003-10-29 Jean-Pierre Roux
289 * adding gdcmHeader::GetLUTRGBA
290 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
291 --> Mathieu, the modif u're waiting for is not yet committed
292 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
294 2003-10-27 Jean-Pierre Roux
295 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
296 . 00191113.dcm DermaColorLossLess.dcm
297 MxTwinLossLess.dcm RadBWLossLess.dcm
298 * ENH: For version prior to vtkImageViewer2 -r 1.19
299 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
301 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
302 * Removal of ido stuff in CMakeLists.txt
304 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
305 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
306 * FIX: remove a call to ->Modified ... see comments
307 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
309 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
310 * FIX: Problem with path for libvtkgdcmPython
311 * ENH: Try adding a search script for python site-package
312 * RMV: Remove some file from medcon lib that are not necessary
313 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
314 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
315 * FIX: More pragma disable fro VC++,
316 I don't think I break something as it is also disable in VTK/ITK.
317 But it fasten debug compilation time.
319 2003-10-23 Jean-Pierre Roux
320 * gdcm now deals with 16 Bits Run Length Encoded images
321 (they are compressed as 2 planes images,
322 one for the high Bytes, the other for low Bytes)
324 2003-10-22 Jean-Pierre Roux
325 * Now CheckRead takes into account :
326 the bugged 'Leonardo' Siemens images
327 the XA images, sent thru the burning VPRO station
328 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
331 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
332 * FIX: When copying a Makefile.am to CMakeLists.txt
333 one should remove the '\'
335 2003-10-22 Jean-Pierre Roux
336 * in gdcmData adding a bugged 'Leonardo' Siemens image
337 (wrong lengths in header)
338 OK with gdcm, KO with the other viewers :-)
339 * add a GE dlx XA image, thru the VEPRO burning station
342 2003-10-21 Jean-Pierre Roux
343 * in gdcmData add the checkvtkgdcmViewer.sh shell script
344 for a brutal checking of vtkgdcmViewer compliance
346 2003-10-21 Jean-Pierre Roux
347 * add the files for 'xmedcon' Jpeg Lossless library
348 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
350 2003-10-21 Jean-Pierre Roux
351 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
353 2003-10-21 Jean-Pierre Roux
354 * garbage Siemens 'Leonardo' images dealt with
355 (the patch is easy to remove)
356 * cosmetic changes to avoid warnings
358 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
359 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
360 no need to press 'r' now.
362 2003-10-20 Jean-Pierre Roux
363 * upgrade of checkRead.sh checkWrite.sh according
364 to new Jpeg Lossless decompressor
365 * add US.3405.1.dcm, a genuine RGB medical file ...
366 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
367 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
369 2003-10-15 Jean-Pierre Roux
370 * general anonymisation in gdcmData
371 * adding the 'color files' from
372 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
373 * adding some well knowed bugged-header images
374 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
375 waiting for their inclusion in Python testsuite
377 2003-10-15 Jean-Pierre Roux
378 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
379 no longer seg faults when file is not found
381 2003-10-14 Jean-Pierre Roux
382 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
384 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
385 * TODO: *.in file to genereate a UseGDCM later
387 2003-10-14 Jean-Pierre Roux
388 * Some supposed-to-be Dicom Images have no preamble.
389 OpenFile takes it into account
390 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
391 * Missing elements added in dicomV3.dic
392 (just to be affraid : have a look at
393 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
394 and do it again next year ;->
396 2003-10-13 Jean-Pierre Roux
397 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
398 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
399 But there are NOT. It's fixed !
401 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
402 * FIX: "jpeglib.h" was not found on VC++
403 * FIX: vtkgdcm was not being installed
405 2003-10-10 Jean-Pierre Roux
406 * ENH : OpenFile closes the file if it *really* doesn't look like
407 an ACR-NEMA / DICOM one.
408 * FIX : testWrite no longer writes an empty file if the source file
410 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
413 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
414 * FIX: CMake generate now documentation
415 * ENH: out of source doc build !
416 * ENH: Generate both user and dev documentation
417 * ENH: Should work on windows too
418 * ENH: Only one doxygen config.in file is needed
419 * FIX: make install should be ok now on ùnix plateform
420 * FIX: PATH to dictionary was wrong (missing /)
421 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
423 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
424 * vtkGdcmReader is now able to read rgb dicom file.
425 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
426 * added a gdcmViewer to vtk test, use mouse to control
427 window level & window width
429 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
430 * CMake-ification of gdcm, we have now two build system
431 * FIX: on cygwin Wsock32 doesn't exist
432 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
434 2003-10-06 Emanuel Ollart
435 * FIX : compilation process wad broken.
436 Changed gdcmViewer_sources to vtkgdcmViewer_sources
438 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
439 * change gdcmViewer -> vtkgdcmViewer
440 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
442 2003-10-06 Jean-Pierre Roux
443 * FIX :A few nasty patches to allow the reading of a lot of nasty images
444 ( e.g : well known GE images with a wrong elem length,
445 : Philips MRI Images with a wrong Huffman table)
446 * still to be done : allow the reading of bugged LEONARDO Siemens images
448 2003-10-03 Jean-Pierre Roux
449 * Odd length strings are padded with '\0' (not with spaces,
450 to remain compliant with already defined strings,
451 like Transfert Syntax UID and others)
453 2003-10-03 Jean-Pierre Roux
454 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
455 to allow displaying RGB images (not only by affim ;-)
457 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
458 * vtkGdcmReader is now able to read rgb dicom file.
459 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
461 2003-10-03 Jean-Pierre Roux
462 * A few nasty patches to allow the reading of a lot of nasty images
463 ( e.g : well known GE images with a wrong elem length,
464 : Philips MRI Images with a wrong Huffman table)
465 * still to be done : allow the reading of bugged LEONARDO Siemens images
467 2003-10-03 Jean-Pierre Roux
468 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
470 2003-10-03 Jean-Pierre Roux
471 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
472 to allow displaying RGB images (not only by affim ;-)
474 2003-10-03 Jean-Pierre Roux
475 * gdcmFile::GetImageDataIntoVector now
476 - deals with MultiFrames MultiFragments Run Length Encoded files
477 - deals with YcBcR (YBR_FULL) files
478 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
479 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
482 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
483 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
484 Two reasons: - clear things
485 - third parties acces gdcm through header files, so won't
486 suffer anymore VC++ complains
487 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
488 * add argv[1] in testvtkGdcmReader.cxx
491 2003-09-24 Jean-Pierre Roux
492 * The lines are now eigthy characters long.for
493 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
495 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
496 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
497 char* to std::string. Thus, the use of strdup becomes useless. (see
498 previous commis of Malaterre)
499 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
500 before the last Malaterre's commit.
502 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
503 * This commit should fix the Debug building under VC++, the problem
504 was mainly a mixture of debug and release lib being loaded at startup.
505 * I also remove a depency to a specific C function: strdup. Because I had
506 to force the link to msvcrtd (whereas strdup is in libc).
508 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
509 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
510 located in the gdcmCommon.h file. All use of reference of tha has been
511 changed to now use the variable GDCM_UNFOUND.
513 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
515 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
516 Dicom dictionary. The test suite can now be run again. Note:
517 I'm note very happy with the " (RET)" changes. I believe this
518 RETAINED comment should be dropped when parsing the dictionary.
521 - AUTHORS updated and now in alphabetical order
522 * Makefile.am now exports gdcm.dsw for Windoze users.
524 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
525 * cygwin complains about missing std:: in subdir Test/
527 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
528 * remove some methods that are now in gdcmHeaderHelper
530 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
531 * vtkGdcmReader set spacing and origin correctly
533 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
534 * Fix a few delete/delete[] mismatch
536 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
537 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
538 interpretation to data given by gdcmHeader. For instance there are
539 heuristics to get informations (look at different places).
540 * it also include a specific class: gdcmSerieHeaderHelper devoted to
541 sorting DICOM images based on different strategies.
542 * modified Makefiles accordingly.
544 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
545 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
546 when building in debug mode
547 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
548 src/win32/gdcmdll.dsp
549 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
551 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
552 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
554 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
555 * src/win32/libgdcmjpeg12.dsp was not dos format
556 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
557 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
559 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
560 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
562 * src/gdcmFile.cxx : bug fix in affectation type
563 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
564 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
565 * Modifs of MVSC projects to compile them. Not concerning 2 identic
566 symbols... future problem ?
568 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
569 * src/win32/libgdcmijpeg12.dsp was missing
570 * modified gdcm.dsw accordingly
572 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
573 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
575 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
576 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
577 commit of JPR (before his hollidays to facilitate our work).
578 * setup.py : bug fix in code. Modifications made while the last commit
579 of JPR. The code hasn't been tested before the commit... it's so
580 useless to make that (for best programmer that is JPR) !!!
582 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
583 * tagged the current version as Version0_3 (i.e. version 0.3)
585 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
586 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
587 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
588 * *.dsp : modifications to use new libgdcmijpeg8 library
589 * setup.py : bug fix on VTKPATH variable
590 * PACKAGER : adding all concerning windows
592 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
593 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
595 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
596 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
597 test suite reported error.
598 * PACKAGER file added (describes what a packager must do when
599 packaging a new release).
600 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
601 * configure.in: upgraded version number to 0.3.0
602 * fixing build of rpm (through rpm -ta):
603 - Doc/Makefile.am exports proper doxygen files
604 - src/jpeg/libijg8/Makefile.am exports the include files.
606 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
607 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
608 * src/gdcmHeader.h : formatting code
610 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
611 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
612 We were obtaining error message from vtk. Now, creation of file list
613 is made in an internal list to prevent this problem.
614 Bug fix when output is empty.
615 Bug fix in update of progress value. Previous commit for this was a bad
617 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
619 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
620 * src/gdcmHeader.h : added method to get the file name
621 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
622 files. Added method to remove all files on the input
623 Added FIXME comment concerning the bad parsing of header made by
624 ExecuteInformation method (in ExecuteData method)
626 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
627 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
628 when using make instal.
629 * src/gdcmFile.cxx : bug fix under Window after JPR commit
630 RQ : the JPR doesn't appear in the ChangeLog... normal for him
632 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
633 * setup.py : adding include dir of jpeg lib to compile all sources
634 * */Win32/*.dsp : JPR fix for windows compilation
636 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
637 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
639 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
640 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
642 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
643 * setup.py is again effective on un*x (takes into account the
644 addon of the jpeg library)
645 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
646 * Doc/Doxy* updated (includes above enhancements)
647 * INSTALL now points to web documentation
649 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
650 * src/gdcmHeader.h doesn't make unnecessary reference to
652 * gdcmPython/Makefile.am now avoids calling the wrappers for the
654 * src/gdcm*.[cxx|h] :
655 - to allow compilation with gcc 3.x
656 -- clean up of STL usage (added explicit usage of std::)
657 -- small fixes on exceptions.
658 Note: linking not tested !
659 - clean of doxygen comments to avoid warnings at documentation
661 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
662 dependent convertion).
664 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
665 * Clean up of previous JPR garbage commit (not even commented in the
667 - Test/Makefile.am removed the reference to unexisting testTS.cxx
668 - moved all jpeg related files from src to src/jpeg/libijg8, with
669 addition/modification of Makefile.am and configure.in.
670 - the testSuite is still brain damage (not guilty).
672 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
673 * WrapVTK.py : modifications to get correctly vtk source files to
675 * vtk/vtkGdcmReader.cxx : modification for an already existing name
676 (FileName -> Filename)
678 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
679 * vtk/vtkGdcmReader.[cxx/h]:
680 - UpdateProgress method should now be effective
681 - removed the limitation on having only images loaded (as opposed
683 - when building a stack of images/volume, a lesser number of
684 gdcmHeader and gdcmFile instances should be used (hopefully
685 accelerating things).
686 - when building a stack of images/volumes, files which are not
687 loadable (wrong path-filename, wrong permissions on existing file,
688 or file not parsable by gdcm) are replaced with a black image
689 in the stack (for the caller to notice the problem).
691 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
692 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
694 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
695 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
696 between standard library (std) and vtk library (problems are found
697 under Windows... thanks Windows !)
699 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
700 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
702 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
704 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
705 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
707 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
708 * When compiling with distutils (see setup.py) the C++ compiler is
709 called with different flags than the default ones (with automake).
710 In order to fix all those warning, I compiled gdcm with the command
711 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
712 and went for warning fixes:
713 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
714 up from unused variables.
715 - vtk/vtkGdcmReader.cxx: potential bug fix.
716 * src/gdcmHeader.h: Doxygen warning cleanup
718 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
720 - typemaps correction to take into account the systematic replacement
721 of "using namespace std" with std:: prefix e.g. std::list,
722 std::string... (cf changes of 2003-05-21).
723 - gdcmGlob global variable of type gdcmGlobal (defined in
724 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
725 exported to Python a as cvar.
726 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
727 and GetPubDictTagNamesByCategory() as a replacement for deprecated
728 gdcmDictSet.GetPubDictTagNames() and
729 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
731 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
732 with the above changes.
734 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
735 * setup.py, manifest.in : bug fix under linux
737 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
738 * Modification of setup.py to compile vtk part too. Then, we have 2
739 wrappers which must work with same distutils. For that, we have a
740 generic distutils in distusiltsWrapping.py ; with :
741 - build_extWrap class to wrap generically all extensions,
742 - ExtensionWrap base class for all wrapping extension that contains
744 - Wrapper interface which wrap sources
745 + In WrapSwig.py we have extension and wrapper for Swig
746 + In WrapVTK.py we have extension and wrapper for VTK
747 * MANIFEST.in : modifications to consider vtk directory and new python
748 files for compilation
750 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
751 * Added python wrappers of vtkGdcmReader vtk class (see the
752 source in vtk/vtkGdcmReader.cxx) :
753 - vtk/Makefile.am now builds a library
754 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
755 python library (as opposed to _gdcm.so wich are the python
756 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
757 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
759 - configure.in has an additional flag --enable-vtk that needs
760 to be set to enable compilation of vtk related code, that is:
761 + vtk/vtkGdcmReader.so and
762 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
763 + gdcmPython/vtkgdcmPython.so (see above)
764 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
765 be read when compressed or when HighBit + 1 != BitsStored),
766 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
767 the usage of the python wrapper of vtkGdcmReader vtk class.
768 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
769 * src/*.[h] all occurences of stl classes are now prefixed with
770 std::, and all occurences of "using namespace std;" where removed.
771 This is to avoid pollution of global namespace in included files.
772 Apparently vtk does not avoid this pitfall: when using both
773 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
774 collision of various stl members (principally cout...).
775 * gdcmPython/testSuite.py now cleanly removes temprory generated
777 * gdcmPython/gdcm.i now declares a typemap for std::string (to
778 comply with above changes)
780 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
781 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
782 * vtk/vtkGdcmReader.cxx now properly inports the image in the
783 vtk data structure (an image Flip was required).
784 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
785 * cosmetic changes in documentation.
787 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
788 * src/gdcmHeader.cxx: the constructor no longer exits when an
789 unexisting file is given as argument.
790 * The subdirectory Data (containing all the images used for the
791 test suite) is not part of this repository anymore. A new module
792 containing those images is now available at
793 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
794 with the name gdcmData.
795 All the python scripts (including the package initialisation file
796 gdcmPython/__init__.py) were adapated to take this change into
797 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
799 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
800 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
801 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
802 demo of the usage of this class.
803 Compilation of this vtk part is only done when using the --enable-vtk
804 at configure (or autogen.sh) stage.
806 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
807 * More memory link related corrections and documentation fixes.
809 - maximum info is obtained with a command of the form:
810 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
811 --show-reachable=yes PrintHeader
812 - the remaining reachable blocks seem to come from the STL
813 allocation scheme through the usage of map and list. It looks
814 like this memory cannot be freed but it is not a memory leak
815 (in fact further invocation to the STL would recollect the
816 unused memory allthough it cannot explicitely be freed).
817 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
818 of displaying an image parsed with gdcm and displayed with VTK.
819 Note: some images don't seem to work e.g.
820 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
821 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
822 Allthough this weakens the semantics, it is a ditch attempt to
823 make gdcm more thread friendly.
825 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
826 * Memory link hunt (by using valgrind through the command
827 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
828 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
829 gdcmHeader::_dicom_vr.
830 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
831 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
833 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
835 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
836 * src/Makefile.am now exports all the necessary include files at
840 * UpdateGroupLength replaced by new one
843 * UpdateGroupLength re-written using H-Table
844 (named UpdateGroupLengthNew untill checks are over)
846 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
847 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
848 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
850 - gdcmHeader::GetPubElValSet removed.
851 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
852 UpdateGroupLength, WriteElements, Write.
853 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
854 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
855 carried the same semantics.
856 - src/gdcmHeaderIdo.cxx changed accordingly.
857 - gdcmFile::WriteBase now regroups all the codes from previous
858 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
859 - enum FileType moved to gdcmCommon.h
860 * src/gdcmHeader.cxx AddDefault trashed
862 * getimageDataSize now calls gdcmGetXSize
863 * Test/*.cxx changed to agree with above changes
865 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
866 * src/gdcmHeader.h: LoadElements() is not a public method anymore
867 (to avoid double call by end user).
868 * Test/*.cxx LoadElements() doesn't need to be called explicitely
869 by end user, since gdcmHeader::gdcmHeader now handles it.
871 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
872 * gdcm/Doc many doxygen changes:
873 - Doxyfile now has two different versions, DoxyfileUsers that generates
874 the html.users end users oriented documentation and
875 DoxyfileDeveloppers that generates the html.developper developper
876 oriented documentation.
877 - README changed accordingly
878 - requirement.txt removed (old design info moved to TODO).
879 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
880 DoxyMainPage.txt, DoxyPython.txt provide more information.
881 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
882 be updated by simply regenerating the docs with doxygen and copying
883 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
884 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
885 all the tests in the form "if (<map>.count() >1)" were removed.
886 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
887 ill-formed documentation sections.
888 * src/gdcmHeader.cxx: ditto
890 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
891 * setup.py fixed for un*x (needed macro for stdint.h)
892 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
893 un*ces with sh-utils test utility.
894 * gdcmPython/demo/test.py renamed to PrintHeader.py
895 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
896 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
897 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
898 * src/gdcm*.cxx JPR's bad inclusion fixed.
900 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
901 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
902 * gdcmPython/demo/test.py changed accordingly.
904 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
905 * gdcmPython/Makefile.am fixed linking against libstdc++
906 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
907 * Swig subdir (historical tests of swig version 1.3.17++) removed
908 * Test/testChangeEntete.cxx some lines commented out in order to make
910 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
911 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
913 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
914 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
915 hence the user doesn't need this explicit call.
916 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
917 i.e. LoadElements() call removed.
918 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
919 - src/Makefile.am declares the proper flag for g++.
920 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
921 for adding user defined new tags.
922 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
923 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
924 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
926 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
927 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
928 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
929 src/Makefile.am : the project should properly compile and install
930 with the autotools, included the python wrappers part.
931 * gdcm.spec.in : added a spec file for RPM packaging.
933 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
934 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
936 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
937 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
938 to exported to the environement (see gdcmPython/testSuite.py
940 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
941 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
942 ElValue class renamed to gdcmElValue for obvious consistency reasons.
943 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
944 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
946 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
947 * gdcmPython/__init__.py doesn't crash anymore when running in
948 in InstallMode or PreInstallMode but with an environement given
949 value of GDCM_DICT_PATH.
950 * src/gdcmDictSet.[cxx/h] coding style.
952 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
953 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
954 * src/gdcm.h general comments moved to TODO, and README
955 * src/gdcm.h should now be seen as a user commodity (including it
956 should suffice to fully use gdcm). It is nowhere including within
957 any of the kernel files src/*.cxx and src/*.h.
959 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
960 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
961 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
963 * src/gdcm*.cxx only include their corresponding include file
964 (as opposed to gdcm.h)
965 * gdcmPython/gdcm.i changed accordingly
966 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
967 the autogen.sh generated "make snapshot" command to work.
968 * autogen.sh removed history related references to crea package.
970 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
971 * distutilsSwigCPlusPlus.py work around some swig portability
974 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
975 * Eventually, python/gdcmPython was renamed to gdcmPython. This
976 was done in a last ditch attempt to get setup.py _really_
977 operationnal. The python/gdcmPython layaout add the advantage
978 of hidding away the python related distutils specific files
979 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
980 Alas, the src directory was out of scope (i.e. it's relative
981 position to setup.py was ../src) which made things impossible to
982 handle (see previous version of python/setup.py). Crossing fingers...
984 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
985 * python/setup.py now works on Un*x. (harder than I thougth)
986 * python/distutilsSwigCPlusPlus.py can now have include files
987 among the list of sources.
989 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
990 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
991 * modifications in MSVC projects
993 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
994 * As stated by the first lines of Test/ExceptionAndPython/README, it
995 looks like we can move back to original usage of exception within
996 src/gdcm* and hence remove the errno stuff that was introduced
997 as a quick and dirty fixture of this problem (added to the TODO).
998 * Doc/Doxyfile configuration file for Doxygen and corresponding
999 README file for usage added.
1000 * Test/testWrite.cxx added. This new test comes from a split of
1001 test.cxx that is now reverted to its original purpous i.e.
1002 testing the proper parsing of a Dicom related file.
1003 testWrite.cxx concentrates on testing the IO part of gdcm.
1004 * Test/bug1.cxx (containing a bug on WIn32) added.
1005 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1006 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1007 whose purpose is to publish the content of the TagNames of the
1008 Dicom public dictionnary were not accessible without an
1009 instance of class gdcmHeader.
1010 - those methods are now static methods of gdcmDictSet and hence
1011 require no instances at all to be invocated.
1012 - within gdcmDictSet this change required to change some method
1013 to class methods (i.e. are now static) among which SetDictPath
1014 (renamed to BuildDictPath) and LoadDefaultPubDict.
1015 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1016 the above changes by calling the new method classes of gdcmDictSet.
1017 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1018 the above to be effective.
1019 * python/gdcmPython: in order to wrap properly the above changes
1020 for Python, swig version now needs to be > 1.3.17.
1021 * python/gdcmPython/Makefile fixed to adapt itself to new
1022 configure/make shema introduced by Johan Montagnat (thanks for the
1023 contribution). Alas this Makefile cannot be turned into a proper
1024 Makefile.am without some heavy changes in the configure.in
1025 (for python dectection).
1026 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1027 now avoids publishing the empty entries.
1029 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1030 * python/setup.py : bug fix concerning install under windows
1031 ExtraPath reused :-P
1032 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1034 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1035 * Dicts/dicomV3.dic : remove double spaces !!!
1036 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1037 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1040 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1041 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1042 method. Doxygenation.
1043 * src/gdcm.h clean up of JPR spurious comments.
1045 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1046 * python/distutilsSwigCPlusPlus.py now properly collects the
1047 shadow classes generated by "swig -c++" (gdcm.py in our case)
1048 when using "python setup.py install".
1049 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1050 reexports the working classes.
1051 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1052 by the classical C errno scheme. This is to prevent an obscure
1053 behavior of the python wrappers when importing wxPython.wx prior
1054 to gdcmPython (which ended up in an abort call). An illustration
1055 of this oddity can be found in the Test/ExceptionAndPython
1056 subdir (see the README file). This problem probably due to
1057 an combination of g++ and dynamic loading.
1058 * added Test/ExceptionAndPython (see above)
1060 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1061 * Changed the layout of the python part to avoid bloating main
1062 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1063 i.e. the distutils arsenal. All the python related stuff is
1064 again in a python subdir, but the package itself is now in
1066 * setup.py was cleaned up:
1067 - pythonIncludePath removed
1068 - python setup.py bdist target is now functional.
1069 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1070 collision with other packages). gdcmPython/demo/*.py changed
1073 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1074 * python subdir moved to gdcmPython (preparation of distutils packaging).
1075 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1076 distutils installer is operational.
1077 * - gdcmPython/__init__.py now properly loads the swig generated
1078 shadow classes (from gdcm.py).
1079 - gdcmPython/demo/*.py changed to import the package gdcmPython
1080 instead of gdcmPython/demo/load.py.
1081 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1083 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1084 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1085 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1086 entries within the associated public Dicom dictionary resp. the same
1087 information but sorted by the fourth field (PAT, IMG, DIR) of the
1089 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1090 are now in the "???" group.
1091 - python/gdcm.i changed accordingly,
1092 - python/demo/printGroupedPublicDict.py added, that gives an example
1093 of the above new functionalities in Python.
1095 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1096 * src/gdcm.h, gdcmHeader.cxx:
1097 - historic references to glib's g_malloc and g_free (#defined)
1098 were definitively removed.
1099 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1100 * src/gdcmElValSet.cxx:
1101 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1102 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1103 - GetElValue(string) renamed to GetElValueByName.
1104 - Added GetElementByName(string).
1105 * src/gdcmHeader.cxx: added
1106 - GetPubElValRepByNumber(guint16, guint16)
1107 - GetPubElValRepByName(string)
1108 - GetShaElValRepByNumber(guint16, guint16)
1109 - GetShaElValRepByName(string)
1110 - GetShaElValByNumber(guint16, guint16)
1111 - GetShaElValRepByName(string)
1112 - GetElValRepByNumber(guint16, guint16)
1113 - GetElValRepByName(string)
1114 - GetElValByNumber(guint16, guint16)
1115 - GetElValRepByName(string)
1116 * Doc/requirements.txt added.
1118 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1119 * Test/Makefile building now depends on the one of libgdcm.so
1120 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1121 pixel data) aware which enables finding the address (offset) of
1122 the pixel data of JPEG encoded DICOM files. This leaves only a single
1123 file in the testSuite whose pixel data address (offset) is unknown.
1124 * python/testSuite.py changed accordingly.
1126 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1127 * VC++ has some strong limitations when working with the STL, as stated
1128 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1129 "Also note that some STL containers (map, set, queue, list, deque)
1130 cannot be exported. [...]
1131 Some STL classes contain nested classes. These classes can not
1133 This is caused by a designed limitation that once a template
1134 class is instantiated, it can not be re-instantiated and
1136 Since our usage of map<> is ubiquitous in gdcm, this "designed
1137 limitation" of VC++ is a pitfall.
1138 Hence the Python wrappers of gdcm cannot be incrementally linked
1139 against the c++ dynamic library. The dirty but only workaround is
1140 to forget about incremental link of dynamic libraries and to generate
1141 the Python wrappers library with the inclusions of the underlying C++
1143 The following modifications concern this matter on Win32/VC++:
1144 - wrapping python correct with standalone wrapped dll (don't use separate
1145 dll under windows !!!!)
1146 - python21_d debug mode enabled (ask Frog how to use it :-)
1147 - NO problem with having an STL member of class for example string in C++
1148 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1149 - Python test of dcmlib in Python is ok under windows on a large set
1151 * removed glib references
1152 * typedef's inserted in gdcm.i for correct swig type management
1154 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1155 * python/demo/*.py load.py extracted from test.py. Added explore.py
1156 that only displays required tags and testAll.py that parses all
1157 the files of the testsuite without using unittest.
1158 * python/testSuite.py other additional test on new files added.
1159 * Data/* new test files added accordingly to the testSuite.
1160 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1161 the vr in the file differs from the one of the dictionary.
1163 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1164 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1165 values, but limits itself to values which are below a user specified
1166 size (by default 1024 bytes).
1167 * python/gdcm.i : elements not loaded (because their size is above the
1168 user specified treshold) are exported with their TagKey as key of the
1169 python dictionary. This enables the testsuite to make some checks
1170 on the unloaded elements (since we have their offset and size).
1171 * python/testSuite.py
1172 - now tests for the existence and proper value of the pixel data
1173 - two new examples added.
1174 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1176 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1177 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1178 aware. See the strategy comments in gdcmHeader::FindeLength().
1179 * Test/test.cxx now accepts a filename as first argument.
1180 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1181 * python/testSuite.py changed to integrate test on above files.
1183 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1184 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1185 the vr was also RET.
1186 * python/testSuite.py more tests added.
1188 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1189 * python/testSuite.py unittest test suite added (uses Data)
1190 * Data/* dcm and acr files for the test suite.
1191 * glib dependance removed from un*x version. We now use ISO C99
1192 7.18 Integer types (see stdint.h)
1193 - python/Makefile, src/Makefile src/gdcm.h
1194 * src/ when an explicit vr (like dicom files) suddenly poped an
1195 implicit element we use to mark the underlying DictEntry of the
1196 concerned ElValue with "Implicit". This strategy was damageable
1197 too the public or provite dictionaries, since some of their vr
1198 would be changed. Since Header::FindLength heavily relies on the
1199 detection by Header::FindVR of falsely explicit elements, I
1200 added an extra ImplicitVr member to ElValue (boolean).
1201 The rest of the changes we the necessary adaptations.
1203 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1204 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1206 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1208 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1209 * Adaptation for porting to VC++:
1211 o forced to use std namespace (for string to be known)
1212 o all class use __declspec export style on WIN32
1213 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1214 (in stdlib.h on Win32 but in std:: for gcc)
1215 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1216 variable GDCM_DICT_PATH.
1217 * src/gdcmHeader.cxx verbose comments made discrete.
1219 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1220 * python/gdcm.i: added a typemap that converts a C++ hashing table
1221 to native Python dictionary.
1222 * python/demo/test.py:
1223 - now uses the native dictionary for exploration of gdcmHeader.
1224 - takes an optional filename argument (the file to parse).
1225 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1226 PubElVals hashing table.
1227 * Dicts/dicomV3.dic removed error prone trailing spaces.
1229 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1230 * Python wrapping process moved away from src/Makefile to
1231 newly created python/Makefile (as well as gdcm.i)
1232 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1233 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1234 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1235 from the environement variable GDCM_DICT_PATH (when existing).
1236 * src/gdcmDict::GetTag bug fix.
1238 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1239 * Straightforward temporary fixes for swig to build the python wrappers.
1240 src/Makefile now has a python working entry [by working we mean
1241 that we can import de shadow classes without errors].
1243 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1244 * hashtest.cxx removed (since allready in Test)
1245 * src/gdcmlib.h renamed to src/gdcm.h
1246 * src/dcm.i renamed to src/gdcm.i
1247 * src/Makefile prepared for python wrapping
1249 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1250 * src/gdcmHeader.cxx :
1251 - Parsing of header is now separated from loading of element values
1252 (see gdcmHeader::LoadElements).
1253 - general clean up of hopefully all file access (creation of
1254 ReadInt16 and ReadInt32)
1256 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1257 * src/gdcmHeader.cxx :
1258 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1260 - SetLgrElem renamed to SetLength
1261 - GetLgrElem renamed to GetLength
1262 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1263 * src/gdcmElValSet.cxx fixed both GetElValue methods
1264 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1265 due to IdoDude was cleaned out.
1267 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1268 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1269 concentrates on finding the value representation (when it exists).
1270 RecupLgr now only finds the element value length, and it avoids
1271 returning the unecessary skL (skipped length).
1272 Also, offsetCourant was simply removed (with taille_fich) since
1273 it was redundant with the File position internals (by using
1274 ftell and fseek). This also made skL (see above in RecupLgr) usage
1276 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1277 on the libido specificities which are handled through class
1279 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1282 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1283 * Truckload of changes. Parsing of header is barely functional
1284 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1286 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1287 * src/gdcmHeader.cxx many addons of low level methods
1289 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1290 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1291 and _IdDcmSWAP_LONG.
1293 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1294 * This corresponds to all the changes decided at the meeting of
1295 May 23 2002. Needless to say we are running late...