1 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
2 * src/gdcmHeader.h : added method to get the file name
3 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
4 files. Added method to remove all files on the input
5 Added FIXME comment concerning the bad parsing of header made by
6 ExecuteInformation method (in ExecuteData method)
8 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
9 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
10 when using make instal.
11 * src/gdcmFile.cxx : bug fix under Window after JPR commit
12 RQ : the JPR doesn't appear in the ChangeLog... normal for him
14 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
15 * setup.py : adding include dir of jpeg lib to compile all sources
16 * */Win32/*.dsp : JPR fix for windows compilation
18 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
19 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
21 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
22 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
24 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
25 * setup.py is again effective on un*x (takes into account the
26 addon of the jpeg library)
27 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
28 * Doc/Doxy* updated (includes above enhancements)
29 * INSTALL now points to web documentation
31 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
32 * src/gdcmHeader.h doesn't make unnecessary reference to
34 * gdcmPython/Makefile.am now avoids calling the wrappers for the
37 - to allow compilation with gcc 3.x
38 -- clean up of STL usage (added explicit usage of std::)
39 -- small fixes on exceptions.
40 Note: linking not tested !
41 - clean of doxygen comments to avoid warnings at documentation
43 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
44 dependent convertion).
46 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
47 * Clean up of previous JPR garbage commit (not even commented in the
49 - Test/Makefile.am removed the reference to unexisting testTS.cxx
50 - moved all jpeg related files from src to src/jpeg/libijg8, with
51 addition/modification of Makefile.am and configure.in.
52 - the testSuite is still brain damage (not guilty).
54 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
55 * WrapVTK.py : modifications to get correctly vtk source files to
57 * vtk/vtkGdcmReader.cxx : modification for an already existing name
58 (FileName -> Filename)
60 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
61 * vtk/vtkGdcmReader.[cxx/h]:
62 - UpdateProgress method should now be effective
63 - removed the limitation on having only images loaded (as opposed
65 - when building a stack of images/volume, a lesser number of
66 gdcmHeader and gdcmFile instances should be used (hopefully
68 - when building a stack of images/volumes, files which are not
69 loadable (wrong path-filename, wrong permissions on existing file,
70 or file not parsable by gdcm) are replaced with a black image
71 in the stack (for the caller to notice the problem).
73 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
74 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
76 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
77 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
78 between standard library (std) and vtk library (problems are found
79 under Windows... thanks Windows !)
81 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
82 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
84 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
86 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
87 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
89 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
90 * When compiling with distutils (see setup.py) the C++ compiler is
91 called with different flags than the default ones (with automake).
92 In order to fix all those warning, I compiled gdcm with the command
93 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
94 and went for warning fixes:
95 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
96 up from unused variables.
97 - vtk/vtkGdcmReader.cxx: potential bug fix.
98 * src/gdcmHeader.h: Doxygen warning cleanup
100 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
102 - typemaps correction to take into account the systematic replacement
103 of "using namespace std" with std:: prefix e.g. std::list,
104 std::string... (cf changes of 2003-05-21).
105 - gdcmGlob global variable of type gdcmGlobal (defined in
106 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
107 exported to Python a as cvar.
108 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
109 and GetPubDictTagNamesByCategory() as a replacement for deprecated
110 gdcmDictSet.GetPubDictTagNames() and
111 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
113 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
114 with the above changes.
116 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
117 * setup.py, manifest.in : bug fix under linux
119 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
120 * Modification of setup.py to compile vtk part too. Then, we have 2
121 wrappers which must work with same distutils. For that, we have a
122 generic distutils in distusiltsWrapping.py ; with :
123 - build_extWrap class to wrap generically all extensions,
124 - ExtensionWrap base class for all wrapping extension that contains
126 - Wrapper interface which wrap sources
127 + In WrapSwig.py we have extension and wrapper for Swig
128 + In WrapVTK.py we have extension and wrapper for VTK
129 * MANIFEST.in : modifications to consider vtk directory and new python
130 files for compilation
132 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
133 * Added python wrappers of vtkGdcmReader vtk class (see the
134 source in vtk/vtkGdcmReader.cxx) :
135 - vtk/Makefile.am now builds a library
136 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
137 python library (as opposed to _gdcm.so wich are the python
138 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
139 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
141 - configure.in has an additional flag --enable-vtk that needs
142 to be set to enable compilation of vtk related code, that is:
143 + vtk/vtkGdcmReader.so and
144 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
145 + gdcmPython/vtkgdcmPython.so (see above)
146 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
147 be read when compressed or when HighBit + 1 != BitsStored),
148 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
149 the usage of the python wrapper of vtkGdcmReader vtk class.
150 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
151 * src/*.[h] all occurences of stl classes are now prefixed with
152 std::, and all occurences of "using namespace std;" where removed.
153 This is to avoid pollution of global namespace in included files.
154 Apparently vtk does not avoid this pitfall: when using both
155 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
156 collision of various stl members (principally cout...).
157 * gdcmPython/testSuite.py now cleanly removes temprory generated
159 * gdcmPython/gdcm.i now declares a typemap for std::string (to
160 comply with above changes)
162 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
163 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
164 * vtk/vtkGdcmReader.cxx now properly inports the image in the
165 vtk data structure (an image Flip was required).
166 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
167 * cosmetic changes in documentation.
169 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
170 * src/gdcmHeader.cxx: the constructor no longer exits when an
171 unexisting file is given as argument.
172 * The subdirectory Data (containing all the images used for the
173 test suite) is not part of this repository anymore. A new module
174 containing those images is now available at
175 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
176 with the name gdcmData.
177 All the python scripts (including the package initialisation file
178 gdcmPython/__init__.py) were adapated to take this change into
179 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
181 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
182 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
183 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
184 demo of the usage of this class.
185 Compilation of this vtk part is only done when using the --enable-vtk
186 at configure (or autogen.sh) stage.
188 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
189 * More memmory link related corrections and documentation fixes.
191 - maximum info is obtained with a command of the form:
192 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
193 --show-reachable=yes PrintHeader
194 - the remaining reachable blocks seem to come from the STL
195 allocation scheme through the usage of map and list. It looks
196 like this memory cannot be freed but it is not a memory leak
197 (in fact further invocation to the STL would recollect the
198 unused memory allthough it cannot explicitely be freed).
199 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
200 of displaying an image parsed with gdcm and displayed with VTK.
201 Note: some images don't seem to work e.g.
202 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
203 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
204 Allthough this weakens the semantics, it is a ditch attempt to
205 make gdcm more thread friendly.
207 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
208 * Memory link hunt (by using valgrind through the command
209 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
210 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
211 gdcmHeader::_dicom_vr.
212 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
213 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
215 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
217 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
218 * src/Makefile.am now exports all the necessary include files at
222 * UpdateGroupLength replaced by new one
225 * UpdateGroupLength re-written using H-Table
226 (named UpdateGroupLengthNew untill checks are over)
228 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
229 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
230 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
232 - gdcmHeader::GetPubElValSet removed.
233 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
234 UpdateGroupLength, WriteElements, Write.
235 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
236 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
237 carried the same semantics.
238 - src/gdcmHeaderIdo.cxx changed accordingly.
239 - gdcmFile::WriteBase now regroups all the codes from previous
240 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
241 - enum FileType moved to gdcmCommon.h
242 * src/gdcmHeader.cxx AddDefault trashed
244 * getimageDataSize now calls gdcmGetXSize
245 * Test/*.cxx changed to agree with above changes
247 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
248 * src/gdcmHeader.h: LoadElements() is not a public method anymore
249 (to avoid double call by end user).
250 * Test/*.cxx LoadElements() doesn't need to be called explicitely
251 by end user, since gdcmHeader::gdcmHeader now handles it.
253 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
254 * gdcm/Doc many doxygen changes:
255 - Doxyfile now has two different versions, DoxyfileUsers that generates
256 the html.users end users oriented documentation and
257 DoxyfileDeveloppers that generates the html.developper developper
258 oriented documentation.
259 - README changed accordingly
260 - requirement.txt removed (old design info moved to TODO).
261 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
262 DoxyMainPage.txt, DoxyPython.txt provide more information.
263 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
264 be updated by simply regenerating the docs with doxygen and copying
265 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
266 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
267 all the tests in the form "if (<map>.count() >1)" were removed.
268 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
269 ill-formed documentation sections.
270 * src/gdcmHeader.cxx: ditto
272 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
273 * setup.py fixed for un*x (needed macro for stdint.h)
274 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
275 un*ces with sh-utils test utility.
276 * gdcmPython/demo/test.py renamed to PrintHeader.py
277 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
278 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
279 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
280 * src/gdcm*.cxx JPR's bad inclusion fixed.
282 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
283 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
284 * gdcmPython/demo/test.py changed accordingly.
286 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
287 * gdcmPython/Makefile.am fixed linking against libstdc++
288 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
289 * Swig subdir (historical tests of swig version 1.3.17++) removed
290 * Test/testChangeEntete.cxx some lines commented out in order to make
292 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
293 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
295 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
296 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
297 hence the user doesn't need this explicit call.
298 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
299 i.e. LoadElements() call removed.
300 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
301 - src/Makefile.am declares the proper flag for g++.
302 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
303 for adding user defined new tags.
304 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
305 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
306 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
308 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
309 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
310 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
311 src/Makefile.am : the project should properly compile and install
312 with the autotools, included the python wrappers part.
313 * gdcm.spec.in : added a spec file for RPM packaging.
315 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
316 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
318 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
319 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
320 to exported to the environement (see gdcmPython/testSuite.py
322 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
323 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
324 ElValue class renamed to gdcmElValue for obvious consistency reasons.
325 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
326 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
328 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
329 * gdcmPython/__init__.py doesn't crash anymore when running in
330 in InstallMode or PreInstallMode but with an environement given
331 value of GDCM_DICT_PATH.
332 * src/gdcmDictSet.[cxx/h] coding style.
334 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
335 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
336 * src/gdcm.h general comments moved to TODO, and README
337 * src/gdcm.h should now be seen as a user commodity (including it
338 should suffice to fully use gdcm). It is nowhere including within
339 any of the kernel files src/*.cxx and src/*.h.
341 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
342 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
343 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
345 * src/gdcm*.cxx only include their corresponding include file
346 (as opposed to gdcm.h)
347 * gdcmPython/gdcm.i changed accordingly
348 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
349 the autogen.sh generated "make snapshot" command to work.
350 * autogen.sh removed history related references to crea package.
352 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
353 * distutilsSwigCPlusPlus.py work around some swig portability
356 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
357 * Eventually, python/gdcmPython was renamed to gdcmPython. This
358 was done in a last ditch attempt to get setup.py _really_
359 operationnal. The python/gdcmPython layaout add the advantage
360 of hidding away the python related distutils specific files
361 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
362 Alas, the src directory was out of scope (i.e. it's relative
363 position to setup.py was ../src) which made things impossible to
364 handle (see previous version of python/setup.py). Crossing fingers...
366 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
367 * python/setup.py now works on Un*x. (harder than I thougth)
368 * python/distutilsSwigCPlusPlus.py can now have include files
369 among the list of sources.
371 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
372 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
373 * modifications in MSVC projects
375 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
376 * As stated by the first lines of Test/ExceptionAndPython/README, it
377 looks like we can move back to original usage of exception within
378 src/gdcm* and hence remove the errno stuff that was introduced
379 as a quick and dirty fixture of this problem (added to the TODO).
380 * Doc/Doxyfile configuration file for Doxygen and corresponding
381 README file for usage added.
382 * Test/testWrite.cxx added. This new test comes from a split of
383 test.cxx that is now reverted to its original purpous i.e.
384 testing the proper parsing of a Dicom related file.
385 testWrite.cxx concentrates on testing the IO part of gdcm.
386 * Test/bug1.cxx (containing a bug on WIn32) added.
387 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
388 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
389 whose purpose is to publish the content of the TagNames of the
390 Dicom public dictionnary were not accessible without an
391 instance of class gdcmHeader.
392 - those methods are now static methods of gdcmDictSet and hence
393 require no instances at all to be invocated.
394 - within gdcmDictSet this change required to change some method
395 to class methods (i.e. are now static) among which SetDictPath
396 (renamed to BuildDictPath) and LoadDefaultPubDict.
397 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
398 the above changes by calling the new method classes of gdcmDictSet.
399 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
400 the above to be effective.
401 * python/gdcmPython: in order to wrap properly the above changes
402 for Python, swig version now needs to be > 1.3.17.
403 * python/gdcmPython/Makefile fixed to adapt itself to new
404 configure/make shema introduced by Johan Montagnat (thanks for the
405 contribution). Alas this Makefile cannot be turned into a proper
406 Makefile.am without some heavy changes in the configure.in
407 (for python dectection).
408 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
409 now avoids publishing the empty entries.
411 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
412 * python/setup.py : bug fix concerning install under windows
414 * gdcm.dsw : bug fix concerning path for libraries for python !!!
416 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
417 * Dicts/dicomV3.dic : remove double spaces !!!
418 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
419 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
422 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
423 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
424 method. Doxygenation.
425 * src/gdcm.h clean up of JPR spurious comments.
427 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
428 * python/distutilsSwigCPlusPlus.py now properly collects the
429 shadow classes generated by "swig -c++" (gdcm.py in our case)
430 when using "python setup.py install".
431 * python/gdcmPython/__init__.py imports gdcm.py and only manually
432 reexports the working classes.
433 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
434 by the classical C errno scheme. This is to prevent an obscure
435 behavior of the python wrappers when importing wxPython.wx prior
436 to gdcmPython (which ended up in an abort call). An illustration
437 of this oddity can be found in the Test/ExceptionAndPython
438 subdir (see the README file). This problem probably due to
439 an combination of g++ and dynamic loading.
440 * added Test/ExceptionAndPython (see above)
442 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
443 * Changed the layout of the python part to avoid bloating main
444 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
445 i.e. the distutils arsenal. All the python related stuff is
446 again in a python subdir, but the package itself is now in
448 * setup.py was cleaned up:
449 - pythonIncludePath removed
450 - python setup.py bdist target is now functional.
451 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
452 collision with other packages). gdcmPython/demo/*.py changed
454 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
455 * python subdir moved to gdcmPython (preparation of distutils packaging).
456 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
457 distutils installer is operational.
458 * - gdcmPython/__init__.py now properly loads the swig generated
459 shadow classes (from gdcm.py).
460 - gdcmPython/demo/*.py changed to import the package gdcmPython
461 instead of gdcmPython/demo/load.py.
462 - gdcmPython/testSuite.py changed to import the package gdcmPython.
465 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
466 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
467 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
468 entries within the associated public Dicom dictionary resp. the same
469 information but sorted by the fourth field (PAT, IMG, DIR) of the
471 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
472 are now in the "???" group.
473 - python/gdcm.i changed accordingly,
474 - python/demo/printGroupedPublicDict.py added, that gives an example
475 of the above new functionalities in Python.
477 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
478 * src/gdcm.h, gdcmHeader.cxx:
479 - historic references to glib's g_malloc and g_free (#defined)
480 were definitively removed.
481 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
482 * src/gdcmElValSet.cxx:
483 - GetElement(guint32, guint32) renamed to GetElementByNumber.
484 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
485 - GetElValue(string) renamed to GetElValueByName.
486 - Added GetElementByName(string).
487 * src/gdcmHeader.cxx: added
488 - GetPubElValRepByNumber(guint16, guint16)
489 - GetPubElValRepByName(string)
490 - GetShaElValRepByNumber(guint16, guint16)
491 - GetShaElValRepByName(string)
492 - GetShaElValByNumber(guint16, guint16)
493 - GetShaElValRepByName(string)
494 - GetElValRepByNumber(guint16, guint16)
495 - GetElValRepByName(string)
496 - GetElValByNumber(guint16, guint16)
497 - GetElValRepByName(string)
498 * Doc/requirements.txt added.
500 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
501 * Test/Makefile building now depends on the one of libgdcm.so
502 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
503 pixel data) aware which enables finding the address (offset) of
504 the pixel data of JPEG encoded DICOM files. This leaves only a single
505 file in the testSuite whose pixel data address (offset) is unknown.
506 * python/testSuite.py changed accordingly.
508 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
509 * VC++ has some strong limitations when working with the STL, as stated
510 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
511 "Also note that some STL containers (map, set, queue, list, deque)
512 cannot be exported. [...]
513 Some STL classes contain nested classes. These classes can not
515 This is caused by a designed limitation that once a template
516 class is instantiated, it can not be re-instantiated and
518 Since our usage of map<> is ubiquitous in gdcm, this "designed
519 limitation" of VC++ is a pitfall.
520 Hence the Python wrappers of gdcm cannot be incrementally linked
521 against the c++ dynamic library. The dirty but only workaround is
522 to forget about incremental link of dynamic libraries and to generate
523 the Python wrappers library with the inclusions of the underlying C++
525 The following modifications concern this matter on Win32/VC++:
526 - wrapping python correct with standalone wrapped dll (don't use separate
527 dll under windows !!!!)
528 - python21_d debug mode enabled (ask Frog how to use it :-)
529 - NO problem with having an STL member of class for example string in C++
530 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
531 - Python test of dcmlib in Python is ok under windows on a large set
533 * removed glib references
534 * typedef's inserted in gdcm.i for correct swig type management
536 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
537 * python/demo/*.py load.py extracted from test.py. Added explore.py
538 that only displays required tags and testAll.py that parses all
539 the files of the testsuite without using unittest.
540 * python/testSuite.py other additional test on new files added.
541 * Data/* new test files added accordingly to the testSuite.
542 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
543 the vr in the file differs from the one of the dictionary.
545 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
546 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
547 values, but limits itself to values which are below a user specified
548 size (by default 1024 bytes).
549 * python/gdcm.i : elements not loaded (because their size is above the
550 user specified treshold) are exported with their TagKey as key of the
551 python dictionary. This enables the testsuite to make some checks
552 on the unloaded elements (since we have their offset and size).
553 * python/testSuite.py
554 - now tests for the existence and proper value of the pixel data
555 - two new examples added.
556 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
558 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
559 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
560 aware. See the strategy comments in gdcmHeader::FindeLength().
561 * Test/test.cxx now accepts a filename as first argument.
562 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
563 * python/testSuite.py changed to integrate test on above files.
565 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
566 * Dicts/dicomV3.dic removed all the trailing (RET) when the
568 * python/testSuite.py more tests added.
570 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
571 * python/testSuite.py unittest test suite added (uses Data)
572 * Data/* dcm and acr files for the test suite.
573 * glib dependance removed from un*x version. We now use ISO C99
574 7.18 Integer types (see stdint.h)
575 - python/Makefile, src/Makefile src/gdcm.h
576 * src/ when an explicit vr (like dicom files) suddenly poped an
577 implicit element we use to mark the underlying DictEntry of the
578 concerned ElValue with "Implicit". This strategy was damageable
579 too the public or provite dictionaries, since some of their vr
580 would be changed. Since Header::FindLength heavily relies on the
581 detection by Header::FindVR of falsely explicit elements, I
582 added an extra ImplicitVr member to ElValue (boolean).
583 The rest of the changes we the necessary adaptations.
585 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
586 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
588 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
590 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
591 * Adaptation for porting to VC++:
593 o forced to use std namespace (for string to be known)
594 o all class use __declspec export style on WIN32
595 - src/gdcmUtil.cxx new Exit method that wraps the exit call
596 (in stdlib.h on Win32 but in std:: for gcc)
597 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
598 variable GDCM_DICT_PATH.
599 * src/gdcmHeader.cxx verbose comments made discrete.
601 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
602 * python/gdcm.i: added a typemap that converts a C++ hashing table
603 to native Python dictionary.
604 * python/demo/test.py:
605 - now uses the native dictionary for exploration of gdcmHeader.
606 - takes an optional filename argument (the file to parse).
607 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
608 PubElVals hashing table.
609 * Dicts/dicomV3.dic removed error prone trailing spaces.
611 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
612 * Python wrapping process moved away from src/Makefile to
613 newly created python/Makefile (as well as gdcm.i)
614 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
615 * src/gdcmHeader::FindLength only looks for current vr when necessary.
616 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
617 from the environement variable GDCM_DICT_PATH (when existing).
618 * src/gdcmDict::GetTag bug fix.
620 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
621 * Straightforward temporary fixes for swig to build the python wrappers.
622 src/Makefile now has a python working entry [by working we mean
623 that we can import de shadow classes without errors].
625 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
626 * hashtest.cxx removed (since allready in Test)
627 * src/gdcmlib.h renamed to src/gdcm.h
628 * src/dcm.i renamed to src/gdcm.i
629 * src/Makefile prepared for python wrapping
631 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
632 * src/gdcmHeader.cxx :
633 - Parsing of header is now separated from loading of element values
634 (see gdcmHeader::LoadElements).
635 - general clean up of hopefully all file access (creation of
636 ReadInt16 and ReadInt32)
638 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
639 * src/gdcmHeader.cxx :
640 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
642 - SetLgrElem renamed to SetLength
643 - GetLgrElem renamed to GetLength
644 - ~gdcmHeader() made virtual to pesky warning messages at compile.
645 * src/gdcmElValSet.cxx fixed both GetElValue methods
646 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
647 due to IdoDude was cleaned out.
649 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
650 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
651 concentrates on finding the value representation (when it exists).
652 RecupLgr now only finds the element value length, and it avoids
653 returning the unecessary skL (skipped length).
654 Also, offsetCourant was simply removed (with taille_fich) since
655 it was redundant with the File position internals (by using
656 ftell and fseek). This also made skL (see above in RecupLgr) usage
658 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
659 on the libido specificities which are handled through class
661 * Test/implicit_vr.dcm dicom v3 in implicit value representation
664 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
665 * Truckload of changes. Parsing of header is barely functional
666 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
668 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
669 * src/gdcmHeader.cxx many addons of low level methods
671 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
672 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
675 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
676 * This corresponds to all the changes decided at the meeting of
677 May 23 2002. Needless to say we are running late...