1 2004-02-05 Benoit Regrain
2 * ENH : add methods in gdcmObject to get the hash table or the list of
4 * FIX : wrapping python for ListPatient, ListStudy, ListSerie, ListImage
5 * FIX : wrapping python for TagHeaderEntryHT
7 2004-02-04 Benoit Regrain
8 * FIX : even length for some strings when writting the dicom dir
9 * FIX : sort the images in the dicom dir
10 * FIX : Bug fix for python use of dicom dir
13 2004-02-04 Jean-Pierre Roux
14 * FIX : Final solution (?) for icone embedded images
15 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
16 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
17 add groups 6002, 6004, 6006, to allow 'clean' parsing of
18 gdcmData/gdcm-MR-SIEMENS-16.acr1
19 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
20 to make full checking easier
22 2004-02-04 Benoit Regrain
23 * FIX : WriteEntries : coding style & logic in parameters
24 * FIX : Set the elements to create the DicomDir in a dictionary file
26 2004-02-03 Benoit Regrain
27 * gdcmDirList : to parse a hard drive directory in recursive (or not)
28 * gdcmDicomDir : add the load of directory
29 * Bug fix and print add-on
31 2004-02-03 Jean-Pierre Roux
32 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
33 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
34 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
35 * FIX gdcmParser.cxx : 'group length' elements are now considered
36 as integers, even for shadow groups, when file is Implicit VR
38 2004-02-02 Jean-Pierre Roux
39 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
41 of the last synonym :-(
42 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
44 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
45 * FIX taking into account the possible 7fe0,0010 multiplicity
46 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
47 to allow removal of references to 7fe0,0010, to deal with
48 ACR-NEMA images, when 0028,0200 is meaningfull
50 2004-01-31 Jean-Pierre Roux
51 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
52 no longer writes 'Un' on disk
53 * FIX SQ elements with actual length are now dealt with corectly
54 * FIX gdcmFile::WriteBase make the difference, for color images, between
55 the length (for Palette expanded omages)
56 and Raw Length (non expanded image + Palette)
57 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
58 (that broke Write). Replaced by UL.
59 Aware user will reload the field if he
60 thinks it's necesssary
62 2004-01-30 Jean-Pierre Roux
63 * gdcmParser::CheckSwap() now defaults the filetype to ACR
64 when 'dirty Acr' is found, to be compliant with the new
67 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
68 (no DOUBLE images in kosher DICOM,
69 but so usefull for people that miss them ;-)
71 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
72 DICOMDIR related utilities (not checked as Windoze compliant)
74 2004-01-28 Jean-Pierre Roux
75 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
77 2004-01-27 Jean-Pierre Roux
78 * gdcmParser constructor has a new boolean param,'ignore_shadow',
79 to allow skipping the shadow elements, to save memory space.
80 The TRUE value for this param has to be used
81 with a FALSE value for the 'enable_sequence' param.
82 ('public elements' may be embedded in 'shadow Sequences')
83 * gdcmHeader methods now deal with 'embedded icones images' in the header
84 (even when an 'icone image sequence' is announced by the
85 element (0x0088,0x0200), but there is NO icone at all ...
87 * gdcmHeader sometimes Image Location value doesn't follow
88 the supposed processor endianity (see gdcmData/cr172241.dcm).
91 * gdcmHeader add the method
92 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
93 to get *all* the Header Entries with the same tag.
94 GetHeaderEntrySameName is probabely *useless*
95 (no meaning : Name is *not* an identifier within the Dictionnary)
97 2004-01-26 Benoit Regrain
98 * Bug fix in the print of hexadecimal representations. Remove long fields
99 in the print and add a third level of print to print them
101 2004-01-23 Benoit Regrain
102 * Bug fix on field having a VR = 'UI'. Assume that is a string field
103 * Bug fix on test suite after remove the strip made on not string fields
104 * Split the IsReadable method between gdcmParser which test that the file
105 is dicom and gdcmHeader which test that it's an image file
107 2004-01-22 Benoit Regrain
108 * DicomDir : clean code, add methods, set variables in protected or private
109 * gdcmUtil : bug fix for the clean string method
111 2004-01-19 Benoit Regrain
112 * Add the use of shadow dictionaries
113 * bug fix and coding style
115 2004-01-19 Benoit Regrain
116 * src/gdcmFile.cxx : bug fix concerning the close of file
117 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
118 * Add the update of header entries using the shadow library
120 2004-01-19 Benoit Regrain
121 * removal of file gdcmHeader2.cxx
122 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
123 inheriting from gdcmParser. This split is to prepare the integration
125 * bug fix under python
127 2004-01-16 Jean-Pierre Roux
128 * removal of class gdcmHeaderEntrySet
129 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
130 * add file gdcmHeader2.cxx
131 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
133 2004-01-15 Benoit Regrain
134 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
135 entries created while parsing the header. Thus, they will be destroyed
136 when the gdcmDictSet will be destroyed
137 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
140 2004-01-15 Benoit Regrain
141 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
142 made a fatal error because of the memory release at the end of program.
143 The problem was in vtkGdcmReader::ExecuteData where we were allocate
144 some memory and vtk seems to have some problems with that.
145 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
147 2004-01-14 Benoit Regrain
148 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
149 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
150 * src/*.[h|cxx] : make changes due to class name changes
151 * gdcmPython/demo/*.py : bug fix due to method names
153 2004-01-13 Benoit Regrain
154 * src/*.[h|cxx] : coding style
155 * vtk/*.[h|cxx] : coding style
157 2004-01-13 Benoit Regrain
158 * gdcmPython/testSuite.py : test the readable flag of file for tests
159 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
160 It's lied to the stl compilation by MSVC (windows, always windows...)
161 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
163 2004-01-12 Benoit Regrain
164 * src/*.h : add comments
165 * src/gdcmDictSet.h : set the method BuildDictPath in public
166 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
167 directly setted in the source code
168 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
171 2004-01-09 Benoit Regrain
172 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
173 * setup.py : use a reference to gdcmVERSION
175 2004-01-07 Benoit Regrain
176 * Modification to compile with the distutils.
179 2003-12-10 Benoit Regrain
180 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
181 can use a gdcmHeaderHelper to load datas
182 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
183 made in the source code
185 2003-12-10 Benoit Regrain
186 * Update Windows projects and .cvsignore files
188 2003-11-12 Jean-Pierre Roux
189 *ENH gdcmHeader constructor has one more parameter (default value : false)
190 that allows the user to 'go inside' the SeQuences only
192 gdcmElValSet:Print takes it into account
194 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
195 *ENH: Update gdcmPython/CMakeLists
196 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
197 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
199 2003-11-10 Jean-Pierre Roux
200 *FIX : gdcmHeader::LoadElements is now based
201 on the ListTag listElem member,
202 not longer on the TagElValueHT tagHt member
203 *ENH : PrintPubElVal shows (temporarily) both results,
204 with the tagHt member and the listElem member.
205 (it's easier to 'see' the problems when using Printheader)
207 *FIX : old private member LgrElem is now splitted into
208 ReadLength : Length actually found on disk (updated only
209 if bug fixing is necessary), for internal
211 UsableLength : Updated by FixFoundLength, to fix a bug
212 or to allow Parser going on.
213 Will allow to re-write a kosher header when a SeQuence
214 with a length (not 0000) is found
215 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
216 because gdcmElValSet::Add does not update ListElem
219 2003-11-07 Jean-Pierre Roux
220 *FIX misstyping in Transfert Syntax name table
221 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
222 when they have an actual length (not 0000 nor FFFFF)
223 (Nobody should care of it, but DICOMDIR explorers)
225 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
226 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
228 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
229 *ENH: vtkGdcmReader now supports LUT !
230 (vtkgdcmViewer for now is not able to use them though)
232 2003-11-05 Jean-Pierre Roux
233 * in testSuite.py : new files names for checking the package
234 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
235 that returns the pixel area size to the *aware* (vtk) user
236 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
238 2003-11-05 Benoit Regrain
239 * in testSuite.py : Modify the rules for checking the paths
240 : Explicit error messages
241 * in __init__.py : Related modif
243 2003-11-03 Jean-Pierre Roux
244 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
245 to be used by aware (vtk) users that want to manage
246 LUT (and no to turn the PALETTE image into an RGB pixels one)
247 * GetPixelType now returns 8U for 24 Bits images
248 (vtkGdcmReader compliant)
250 2003-10-31 Jean-Pierre Roux
251 * Removal of *all* gdcmData images and add them again
252 in order to loose the 'history' of un-anonymised images
254 2003-10-31 Jean-Pierre Roux
255 *RMV : removal of useless jBitsInJsample.h
256 for both 8 and 12 Bits JPEG Lossy Libraries
258 2003-10-31 Jean-Pierre Roux
259 * ENH : Add the functions gdcmFile::GetImageDataRaw
260 gdcmFile::GetImageDataIntoVectorRaw
261 that act as GetImageData and GetImageDataIntoVector
262 except the making of an RGB Plane from Gray Plane + LUT
263 Intended to aware (vtk) users who know how to manage
266 GetLUTRGBA return a R,G,B,A LUT if any
267 lgrTotaleRaw gives the 'Raw' length
268 GetImageDataRaw returns the gray Plane
269 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
270 (They stay Grey, just like with other Dicom viewers :-(
272 2003-10-30 Jean-Pierre Roux
273 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
275 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
276 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
277 being coherents dicom files.
279 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
280 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
282 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
283 *ENH: Two steps is necessary to please VC++ compiler...
284 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
285 *ENH: Add include dir to medcon lib
286 *FIX: only one function is being exported for now !
287 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
289 2003-10-29 Jean-Pierre Roux
290 * adding gdcmHeader::GetLUTRGBA
291 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
292 --> Mathieu, the modif u're waiting for is not yet committed
293 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
295 2003-10-27 Jean-Pierre Roux
296 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
297 . 00191113.dcm DermaColorLossLess.dcm
298 MxTwinLossLess.dcm RadBWLossLess.dcm
299 * ENH: For version prior to vtkImageViewer2 -r 1.19
300 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
302 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
303 * Removal of ido stuff in CMakeLists.txt
305 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
306 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
307 * FIX: remove a call to ->Modified ... see comments
308 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
310 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
311 * FIX: Problem with path for libvtkgdcmPython
312 * ENH: Try adding a search script for python site-package
313 * RMV: Remove some file from medcon lib that are not necessary
314 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
315 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
316 * FIX: More pragma disable fro VC++,
317 I don't think I break something as it is also disable in VTK/ITK.
318 But it fasten debug compilation time.
320 2003-10-23 Jean-Pierre Roux
321 * gdcm now deals with 16 Bits Run Length Encoded images
322 (they are compressed as 2 planes images,
323 one for the high Bytes, the other for low Bytes)
325 2003-10-22 Jean-Pierre Roux
326 * Now CheckRead takes into account :
327 the bugged 'Leonardo' Siemens images
328 the XA images, sent thru the burning VPRO station
329 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
332 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
333 * FIX: When copying a Makefile.am to CMakeLists.txt
334 one should remove the '\'
336 2003-10-22 Jean-Pierre Roux
337 * in gdcmData adding a bugged 'Leonardo' Siemens image
338 (wrong lengths in header)
339 OK with gdcm, KO with the other viewers :-)
340 * add a GE dlx XA image, thru the VEPRO burning station
343 2003-10-21 Jean-Pierre Roux
344 * in gdcmData add the checkvtkgdcmViewer.sh shell script
345 for a brutal checking of vtkgdcmViewer compliance
347 2003-10-21 Jean-Pierre Roux
348 * add the files for 'xmedcon' Jpeg Lossless library
349 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
351 2003-10-21 Jean-Pierre Roux
352 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
354 2003-10-21 Jean-Pierre Roux
355 * garbage Siemens 'Leonardo' images dealt with
356 (the patch is easy to remove)
357 * cosmetic changes to avoid warnings
359 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
360 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
361 no need to press 'r' now.
363 2003-10-20 Jean-Pierre Roux
364 * upgrade of checkRead.sh checkWrite.sh according
365 to new Jpeg Lossless decompressor
366 * add US.3405.1.dcm, a genuine RGB medical file ...
367 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
368 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
370 2003-10-15 Jean-Pierre Roux
371 * general anonymisation in gdcmData
372 * adding the 'color files' from
373 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
374 * adding some well knowed bugged-header images
375 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
376 waiting for their inclusion in Python testsuite
378 2003-10-15 Jean-Pierre Roux
379 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
380 no longer seg faults when file is not found
382 2003-10-14 Jean-Pierre Roux
383 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
385 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
386 * TODO: *.in file to genereate a UseGDCM later
388 2003-10-14 Jean-Pierre Roux
389 * Some supposed-to-be Dicom Images have no preamble.
390 OpenFile takes it into account
391 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
392 * Missing elements added in dicomV3.dic
393 (just to be affraid : have a look at
394 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
395 and do it again next year ;->
397 2003-10-13 Jean-Pierre Roux
398 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
399 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
400 But there are NOT. It's fixed !
402 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
403 * FIX: "jpeglib.h" was not found on VC++
404 * FIX: vtkgdcm was not being installed
406 2003-10-10 Jean-Pierre Roux
407 * ENH : OpenFile closes the file if it *really* doesn't look like
408 an ACR-NEMA / DICOM one.
409 * FIX : testWrite no longer writes an empty file if the source file
411 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
414 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
415 * FIX: CMake generate now documentation
416 * ENH: out of source doc build !
417 * ENH: Generate both user and dev documentation
418 * ENH: Should work on windows too
419 * ENH: Only one doxygen config.in file is needed
420 * FIX: make install should be ok now on ùnix plateform
421 * FIX: PATH to dictionary was wrong (missing /)
422 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
424 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
425 * vtkGdcmReader is now able to read rgb dicom file.
426 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
427 * added a gdcmViewer to vtk test, use mouse to control
428 window level & window width
430 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
431 * CMake-ification of gdcm, we have now two build system
432 * FIX: on cygwin Wsock32 doesn't exist
433 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
435 2003-10-06 Emanuel Ollart
436 * FIX : compilation process wad broken.
437 Changed gdcmViewer_sources to vtkgdcmViewer_sources
439 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
440 * change gdcmViewer -> vtkgdcmViewer
441 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
443 2003-10-06 Jean-Pierre Roux
444 * FIX :A few nasty patches to allow the reading of a lot of nasty images
445 ( e.g : well known GE images with a wrong elem length,
446 : Philips MRI Images with a wrong Huffman table)
447 * still to be done : allow the reading of bugged LEONARDO Siemens images
449 2003-10-03 Jean-Pierre Roux
450 * Odd length strings are padded with '\0' (not with spaces,
451 to remain compliant with already defined strings,
452 like Transfert Syntax UID and others)
454 2003-10-03 Jean-Pierre Roux
455 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
456 to allow displaying RGB images (not only by affim ;-)
458 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
459 * vtkGdcmReader is now able to read rgb dicom file.
460 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
462 2003-10-03 Jean-Pierre Roux
463 * A few nasty patches to allow the reading of a lot of nasty images
464 ( e.g : well known GE images with a wrong elem length,
465 : Philips MRI Images with a wrong Huffman table)
466 * still to be done : allow the reading of bugged LEONARDO Siemens images
468 2003-10-03 Jean-Pierre Roux
469 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
471 2003-10-03 Jean-Pierre Roux
472 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
473 to allow displaying RGB images (not only by affim ;-)
475 2003-10-03 Jean-Pierre Roux
476 * gdcmFile::GetImageDataIntoVector now
477 - deals with MultiFrames MultiFragments Run Length Encoded files
478 - deals with YcBcR (YBR_FULL) files
479 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
480 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
483 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
484 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
485 Two reasons: - clear things
486 - third parties acces gdcm through header files, so won't
487 suffer anymore VC++ complains
488 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
489 * add argv[1] in testvtkGdcmReader.cxx
492 2003-09-24 Jean-Pierre Roux
493 * The lines are now eigthy characters long.for
494 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
496 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
497 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
498 char* to std::string. Thus, the use of strdup becomes useless. (see
499 previous commis of Malaterre)
500 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
501 before the last Malaterre's commit.
503 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
504 * This commit should fix the Debug building under VC++, the problem
505 was mainly a mixture of debug and release lib being loaded at startup.
506 * I also remove a depency to a specific C function: strdup. Because I had
507 to force the link to msvcrtd (whereas strdup is in libc).
509 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
510 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
511 located in the gdcmCommon.h file. All use of reference of tha has been
512 changed to now use the variable GDCM_UNFOUND.
514 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
516 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
517 Dicom dictionary. The test suite can now be run again. Note:
518 I'm note very happy with the " (RET)" changes. I believe this
519 RETAINED comment should be dropped when parsing the dictionary.
522 - AUTHORS updated and now in alphabetical order
523 * Makefile.am now exports gdcm.dsw for Windoze users.
525 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
526 * cygwin complains about missing std:: in subdir Test/
528 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
529 * remove some methods that are now in gdcmHeaderHelper
531 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
532 * vtkGdcmReader set spacing and origin correctly
534 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
535 * Fix a few delete/delete[] mismatch
537 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
538 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
539 interpretation to data given by gdcmHeader. For instance there are
540 heuristics to get informations (look at different places).
541 * it also include a specific class: gdcmSerieHeaderHelper devoted to
542 sorting DICOM images based on different strategies.
543 * modified Makefiles accordingly.
545 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
546 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
547 when building in debug mode
548 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
549 src/win32/gdcmdll.dsp
550 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
552 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
553 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
555 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
556 * src/win32/libgdcmjpeg12.dsp was not dos format
557 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
558 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
560 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
561 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
563 * src/gdcmFile.cxx : bug fix in affectation type
564 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
565 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
566 * Modifs of MVSC projects to compile them. Not concerning 2 identic
567 symbols... future problem ?
569 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
570 * src/win32/libgdcmijpeg12.dsp was missing
571 * modified gdcm.dsw accordingly
573 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
574 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
576 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
577 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
578 commit of JPR (before his hollidays to facilitate our work).
579 * setup.py : bug fix in code. Modifications made while the last commit
580 of JPR. The code hasn't been tested before the commit... it's so
581 useless to make that (for best programmer that is JPR) !!!
583 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
584 * tagged the current version as Version0_3 (i.e. version 0.3)
586 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
587 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
588 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
589 * *.dsp : modifications to use new libgdcmijpeg8 library
590 * setup.py : bug fix on VTKPATH variable
591 * PACKAGER : adding all concerning windows
593 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
594 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
596 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
597 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
598 test suite reported error.
599 * PACKAGER file added (describes what a packager must do when
600 packaging a new release).
601 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
602 * configure.in: upgraded version number to 0.3.0
603 * fixing build of rpm (through rpm -ta):
604 - Doc/Makefile.am exports proper doxygen files
605 - src/jpeg/libijg8/Makefile.am exports the include files.
607 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
608 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
609 * src/gdcmHeader.h : formatting code
611 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
612 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
613 We were obtaining error message from vtk. Now, creation of file list
614 is made in an internal list to prevent this problem.
615 Bug fix when output is empty.
616 Bug fix in update of progress value. Previous commit for this was a bad
618 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
620 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
621 * src/gdcmHeader.h : added method to get the file name
622 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
623 files. Added method to remove all files on the input
624 Added FIXME comment concerning the bad parsing of header made by
625 ExecuteInformation method (in ExecuteData method)
627 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
628 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
629 when using make instal.
630 * src/gdcmFile.cxx : bug fix under Window after JPR commit
631 RQ : the JPR doesn't appear in the ChangeLog... normal for him
633 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
634 * setup.py : adding include dir of jpeg lib to compile all sources
635 * */Win32/*.dsp : JPR fix for windows compilation
637 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
638 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
640 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
641 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
643 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
644 * setup.py is again effective on un*x (takes into account the
645 addon of the jpeg library)
646 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
647 * Doc/Doxy* updated (includes above enhancements)
648 * INSTALL now points to web documentation
650 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
651 * src/gdcmHeader.h doesn't make unnecessary reference to
653 * gdcmPython/Makefile.am now avoids calling the wrappers for the
655 * src/gdcm*.[cxx|h] :
656 - to allow compilation with gcc 3.x
657 -- clean up of STL usage (added explicit usage of std::)
658 -- small fixes on exceptions.
659 Note: linking not tested !
660 - clean of doxygen comments to avoid warnings at documentation
662 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
663 dependent convertion).
665 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
666 * Clean up of previous JPR garbage commit (not even commented in the
668 - Test/Makefile.am removed the reference to unexisting testTS.cxx
669 - moved all jpeg related files from src to src/jpeg/libijg8, with
670 addition/modification of Makefile.am and configure.in.
671 - the testSuite is still brain damage (not guilty).
673 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
674 * WrapVTK.py : modifications to get correctly vtk source files to
676 * vtk/vtkGdcmReader.cxx : modification for an already existing name
677 (FileName -> Filename)
679 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
680 * vtk/vtkGdcmReader.[cxx/h]:
681 - UpdateProgress method should now be effective
682 - removed the limitation on having only images loaded (as opposed
684 - when building a stack of images/volume, a lesser number of
685 gdcmHeader and gdcmFile instances should be used (hopefully
686 accelerating things).
687 - when building a stack of images/volumes, files which are not
688 loadable (wrong path-filename, wrong permissions on existing file,
689 or file not parsable by gdcm) are replaced with a black image
690 in the stack (for the caller to notice the problem).
692 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
693 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
695 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
696 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
697 between standard library (std) and vtk library (problems are found
698 under Windows... thanks Windows !)
700 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
701 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
703 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
705 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
706 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
708 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
709 * When compiling with distutils (see setup.py) the C++ compiler is
710 called with different flags than the default ones (with automake).
711 In order to fix all those warning, I compiled gdcm with the command
712 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
713 and went for warning fixes:
714 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
715 up from unused variables.
716 - vtk/vtkGdcmReader.cxx: potential bug fix.
717 * src/gdcmHeader.h: Doxygen warning cleanup
719 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
721 - typemaps correction to take into account the systematic replacement
722 of "using namespace std" with std:: prefix e.g. std::list,
723 std::string... (cf changes of 2003-05-21).
724 - gdcmGlob global variable of type gdcmGlobal (defined in
725 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
726 exported to Python a as cvar.
727 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
728 and GetPubDictTagNamesByCategory() as a replacement for deprecated
729 gdcmDictSet.GetPubDictTagNames() and
730 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
732 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
733 with the above changes.
735 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
736 * setup.py, manifest.in : bug fix under linux
738 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
739 * Modification of setup.py to compile vtk part too. Then, we have 2
740 wrappers which must work with same distutils. For that, we have a
741 generic distutils in distusiltsWrapping.py ; with :
742 - build_extWrap class to wrap generically all extensions,
743 - ExtensionWrap base class for all wrapping extension that contains
745 - Wrapper interface which wrap sources
746 + In WrapSwig.py we have extension and wrapper for Swig
747 + In WrapVTK.py we have extension and wrapper for VTK
748 * MANIFEST.in : modifications to consider vtk directory and new python
749 files for compilation
751 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
752 * Added python wrappers of vtkGdcmReader vtk class (see the
753 source in vtk/vtkGdcmReader.cxx) :
754 - vtk/Makefile.am now builds a library
755 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
756 python library (as opposed to _gdcm.so wich are the python
757 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
758 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
760 - configure.in has an additional flag --enable-vtk that needs
761 to be set to enable compilation of vtk related code, that is:
762 + vtk/vtkGdcmReader.so and
763 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
764 + gdcmPython/vtkgdcmPython.so (see above)
765 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
766 be read when compressed or when HighBit + 1 != BitsStored),
767 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
768 the usage of the python wrapper of vtkGdcmReader vtk class.
769 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
770 * src/*.[h] all occurences of stl classes are now prefixed with
771 std::, and all occurences of "using namespace std;" where removed.
772 This is to avoid pollution of global namespace in included files.
773 Apparently vtk does not avoid this pitfall: when using both
774 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
775 collision of various stl members (principally cout...).
776 * gdcmPython/testSuite.py now cleanly removes temprory generated
778 * gdcmPython/gdcm.i now declares a typemap for std::string (to
779 comply with above changes)
781 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
782 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
783 * vtk/vtkGdcmReader.cxx now properly inports the image in the
784 vtk data structure (an image Flip was required).
785 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
786 * cosmetic changes in documentation.
788 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
789 * src/gdcmHeader.cxx: the constructor no longer exits when an
790 unexisting file is given as argument.
791 * The subdirectory Data (containing all the images used for the
792 test suite) is not part of this repository anymore. A new module
793 containing those images is now available at
794 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
795 with the name gdcmData.
796 All the python scripts (including the package initialisation file
797 gdcmPython/__init__.py) were adapated to take this change into
798 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
800 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
801 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
802 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
803 demo of the usage of this class.
804 Compilation of this vtk part is only done when using the --enable-vtk
805 at configure (or autogen.sh) stage.
807 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
808 * More memory link related corrections and documentation fixes.
810 - maximum info is obtained with a command of the form:
811 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
812 --show-reachable=yes PrintHeader
813 - the remaining reachable blocks seem to come from the STL
814 allocation scheme through the usage of map and list. It looks
815 like this memory cannot be freed but it is not a memory leak
816 (in fact further invocation to the STL would recollect the
817 unused memory allthough it cannot explicitely be freed).
818 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
819 of displaying an image parsed with gdcm and displayed with VTK.
820 Note: some images don't seem to work e.g.
821 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
822 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
823 Allthough this weakens the semantics, it is a ditch attempt to
824 make gdcm more thread friendly.
826 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
827 * Memory link hunt (by using valgrind through the command
828 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
829 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
830 gdcmHeader::_dicom_vr.
831 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
832 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
834 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
836 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
837 * src/Makefile.am now exports all the necessary include files at
841 * UpdateGroupLength replaced by new one
844 * UpdateGroupLength re-written using H-Table
845 (named UpdateGroupLengthNew untill checks are over)
847 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
848 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
849 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
851 - gdcmHeader::GetPubElValSet removed.
852 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
853 UpdateGroupLength, WriteElements, Write.
854 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
855 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
856 carried the same semantics.
857 - src/gdcmHeaderIdo.cxx changed accordingly.
858 - gdcmFile::WriteBase now regroups all the codes from previous
859 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
860 - enum FileType moved to gdcmCommon.h
861 * src/gdcmHeader.cxx AddDefault trashed
863 * getimageDataSize now calls gdcmGetXSize
864 * Test/*.cxx changed to agree with above changes
866 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
867 * src/gdcmHeader.h: LoadElements() is not a public method anymore
868 (to avoid double call by end user).
869 * Test/*.cxx LoadElements() doesn't need to be called explicitely
870 by end user, since gdcmHeader::gdcmHeader now handles it.
872 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
873 * gdcm/Doc many doxygen changes:
874 - Doxyfile now has two different versions, DoxyfileUsers that generates
875 the html.users end users oriented documentation and
876 DoxyfileDeveloppers that generates the html.developper developper
877 oriented documentation.
878 - README changed accordingly
879 - requirement.txt removed (old design info moved to TODO).
880 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
881 DoxyMainPage.txt, DoxyPython.txt provide more information.
882 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
883 be updated by simply regenerating the docs with doxygen and copying
884 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
885 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
886 all the tests in the form "if (<map>.count() >1)" were removed.
887 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
888 ill-formed documentation sections.
889 * src/gdcmHeader.cxx: ditto
891 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
892 * setup.py fixed for un*x (needed macro for stdint.h)
893 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
894 un*ces with sh-utils test utility.
895 * gdcmPython/demo/test.py renamed to PrintHeader.py
896 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
897 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
898 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
899 * src/gdcm*.cxx JPR's bad inclusion fixed.
901 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
902 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
903 * gdcmPython/demo/test.py changed accordingly.
905 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
906 * gdcmPython/Makefile.am fixed linking against libstdc++
907 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
908 * Swig subdir (historical tests of swig version 1.3.17++) removed
909 * Test/testChangeEntete.cxx some lines commented out in order to make
911 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
912 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
914 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
915 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
916 hence the user doesn't need this explicit call.
917 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
918 i.e. LoadElements() call removed.
919 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
920 - src/Makefile.am declares the proper flag for g++.
921 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
922 for adding user defined new tags.
923 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
924 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
925 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
927 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
928 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
929 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
930 src/Makefile.am : the project should properly compile and install
931 with the autotools, included the python wrappers part.
932 * gdcm.spec.in : added a spec file for RPM packaging.
934 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
935 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
937 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
938 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
939 to exported to the environement (see gdcmPython/testSuite.py
941 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
942 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
943 ElValue class renamed to gdcmElValue for obvious consistency reasons.
944 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
945 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
947 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
948 * gdcmPython/__init__.py doesn't crash anymore when running in
949 in InstallMode or PreInstallMode but with an environement given
950 value of GDCM_DICT_PATH.
951 * src/gdcmDictSet.[cxx/h] coding style.
953 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
954 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
955 * src/gdcm.h general comments moved to TODO, and README
956 * src/gdcm.h should now be seen as a user commodity (including it
957 should suffice to fully use gdcm). It is nowhere including within
958 any of the kernel files src/*.cxx and src/*.h.
960 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
961 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
962 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
964 * src/gdcm*.cxx only include their corresponding include file
965 (as opposed to gdcm.h)
966 * gdcmPython/gdcm.i changed accordingly
967 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
968 the autogen.sh generated "make snapshot" command to work.
969 * autogen.sh removed history related references to crea package.
971 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
972 * distutilsSwigCPlusPlus.py work around some swig portability
975 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
976 * Eventually, python/gdcmPython was renamed to gdcmPython. This
977 was done in a last ditch attempt to get setup.py _really_
978 operationnal. The python/gdcmPython layaout add the advantage
979 of hidding away the python related distutils specific files
980 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
981 Alas, the src directory was out of scope (i.e. it's relative
982 position to setup.py was ../src) which made things impossible to
983 handle (see previous version of python/setup.py). Crossing fingers...
985 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
986 * python/setup.py now works on Un*x. (harder than I thougth)
987 * python/distutilsSwigCPlusPlus.py can now have include files
988 among the list of sources.
990 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
991 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
992 * modifications in MSVC projects
994 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
995 * As stated by the first lines of Test/ExceptionAndPython/README, it
996 looks like we can move back to original usage of exception within
997 src/gdcm* and hence remove the errno stuff that was introduced
998 as a quick and dirty fixture of this problem (added to the TODO).
999 * Doc/Doxyfile configuration file for Doxygen and corresponding
1000 README file for usage added.
1001 * Test/testWrite.cxx added. This new test comes from a split of
1002 test.cxx that is now reverted to its original purpous i.e.
1003 testing the proper parsing of a Dicom related file.
1004 testWrite.cxx concentrates on testing the IO part of gdcm.
1005 * Test/bug1.cxx (containing a bug on WIn32) added.
1006 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1007 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1008 whose purpose is to publish the content of the TagNames of the
1009 Dicom public dictionnary were not accessible without an
1010 instance of class gdcmHeader.
1011 - those methods are now static methods of gdcmDictSet and hence
1012 require no instances at all to be invocated.
1013 - within gdcmDictSet this change required to change some method
1014 to class methods (i.e. are now static) among which SetDictPath
1015 (renamed to BuildDictPath) and LoadDefaultPubDict.
1016 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1017 the above changes by calling the new method classes of gdcmDictSet.
1018 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1019 the above to be effective.
1020 * python/gdcmPython: in order to wrap properly the above changes
1021 for Python, swig version now needs to be > 1.3.17.
1022 * python/gdcmPython/Makefile fixed to adapt itself to new
1023 configure/make shema introduced by Johan Montagnat (thanks for the
1024 contribution). Alas this Makefile cannot be turned into a proper
1025 Makefile.am without some heavy changes in the configure.in
1026 (for python dectection).
1027 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1028 now avoids publishing the empty entries.
1030 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1031 * python/setup.py : bug fix concerning install under windows
1032 ExtraPath reused :-P
1033 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1035 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1036 * Dicts/dicomV3.dic : remove double spaces !!!
1037 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1038 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1041 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1042 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1043 method. Doxygenation.
1044 * src/gdcm.h clean up of JPR spurious comments.
1046 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1047 * python/distutilsSwigCPlusPlus.py now properly collects the
1048 shadow classes generated by "swig -c++" (gdcm.py in our case)
1049 when using "python setup.py install".
1050 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1051 reexports the working classes.
1052 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1053 by the classical C errno scheme. This is to prevent an obscure
1054 behavior of the python wrappers when importing wxPython.wx prior
1055 to gdcmPython (which ended up in an abort call). An illustration
1056 of this oddity can be found in the Test/ExceptionAndPython
1057 subdir (see the README file). This problem probably due to
1058 an combination of g++ and dynamic loading.
1059 * added Test/ExceptionAndPython (see above)
1061 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1062 * Changed the layout of the python part to avoid bloating main
1063 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1064 i.e. the distutils arsenal. All the python related stuff is
1065 again in a python subdir, but the package itself is now in
1067 * setup.py was cleaned up:
1068 - pythonIncludePath removed
1069 - python setup.py bdist target is now functional.
1070 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1071 collision with other packages). gdcmPython/demo/*.py changed
1074 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1075 * python subdir moved to gdcmPython (preparation of distutils packaging).
1076 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1077 distutils installer is operational.
1078 * - gdcmPython/__init__.py now properly loads the swig generated
1079 shadow classes (from gdcm.py).
1080 - gdcmPython/demo/*.py changed to import the package gdcmPython
1081 instead of gdcmPython/demo/load.py.
1082 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1084 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1085 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1086 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1087 entries within the associated public Dicom dictionary resp. the same
1088 information but sorted by the fourth field (PAT, IMG, DIR) of the
1090 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1091 are now in the "???" group.
1092 - python/gdcm.i changed accordingly,
1093 - python/demo/printGroupedPublicDict.py added, that gives an example
1094 of the above new functionalities in Python.
1096 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1097 * src/gdcm.h, gdcmHeader.cxx:
1098 - historic references to glib's g_malloc and g_free (#defined)
1099 were definitively removed.
1100 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1101 * src/gdcmElValSet.cxx:
1102 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1103 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1104 - GetElValue(string) renamed to GetElValueByName.
1105 - Added GetElementByName(string).
1106 * src/gdcmHeader.cxx: added
1107 - GetPubElValRepByNumber(guint16, guint16)
1108 - GetPubElValRepByName(string)
1109 - GetShaElValRepByNumber(guint16, guint16)
1110 - GetShaElValRepByName(string)
1111 - GetShaElValByNumber(guint16, guint16)
1112 - GetShaElValRepByName(string)
1113 - GetElValRepByNumber(guint16, guint16)
1114 - GetElValRepByName(string)
1115 - GetElValByNumber(guint16, guint16)
1116 - GetElValRepByName(string)
1117 * Doc/requirements.txt added.
1119 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1120 * Test/Makefile building now depends on the one of libgdcm.so
1121 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1122 pixel data) aware which enables finding the address (offset) of
1123 the pixel data of JPEG encoded DICOM files. This leaves only a single
1124 file in the testSuite whose pixel data address (offset) is unknown.
1125 * python/testSuite.py changed accordingly.
1127 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1128 * VC++ has some strong limitations when working with the STL, as stated
1129 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1130 "Also note that some STL containers (map, set, queue, list, deque)
1131 cannot be exported. [...]
1132 Some STL classes contain nested classes. These classes can not
1134 This is caused by a designed limitation that once a template
1135 class is instantiated, it can not be re-instantiated and
1137 Since our usage of map<> is ubiquitous in gdcm, this "designed
1138 limitation" of VC++ is a pitfall.
1139 Hence the Python wrappers of gdcm cannot be incrementally linked
1140 against the c++ dynamic library. The dirty but only workaround is
1141 to forget about incremental link of dynamic libraries and to generate
1142 the Python wrappers library with the inclusions of the underlying C++
1144 The following modifications concern this matter on Win32/VC++:
1145 - wrapping python correct with standalone wrapped dll (don't use separate
1146 dll under windows !!!!)
1147 - python21_d debug mode enabled (ask Frog how to use it :-)
1148 - NO problem with having an STL member of class for example string in C++
1149 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1150 - Python test of dcmlib in Python is ok under windows on a large set
1152 * removed glib references
1153 * typedef's inserted in gdcm.i for correct swig type management
1155 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1156 * python/demo/*.py load.py extracted from test.py. Added explore.py
1157 that only displays required tags and testAll.py that parses all
1158 the files of the testsuite without using unittest.
1159 * python/testSuite.py other additional test on new files added.
1160 * Data/* new test files added accordingly to the testSuite.
1161 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1162 the vr in the file differs from the one of the dictionary.
1164 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1165 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1166 values, but limits itself to values which are below a user specified
1167 size (by default 1024 bytes).
1168 * python/gdcm.i : elements not loaded (because their size is above the
1169 user specified treshold) are exported with their TagKey as key of the
1170 python dictionary. This enables the testsuite to make some checks
1171 on the unloaded elements (since we have their offset and size).
1172 * python/testSuite.py
1173 - now tests for the existence and proper value of the pixel data
1174 - two new examples added.
1175 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1177 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1178 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1179 aware. See the strategy comments in gdcmHeader::FindeLength().
1180 * Test/test.cxx now accepts a filename as first argument.
1181 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1182 * python/testSuite.py changed to integrate test on above files.
1184 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1185 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1186 the vr was also RET.
1187 * python/testSuite.py more tests added.
1189 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1190 * python/testSuite.py unittest test suite added (uses Data)
1191 * Data/* dcm and acr files for the test suite.
1192 * glib dependance removed from un*x version. We now use ISO C99
1193 7.18 Integer types (see stdint.h)
1194 - python/Makefile, src/Makefile src/gdcm.h
1195 * src/ when an explicit vr (like dicom files) suddenly poped an
1196 implicit element we use to mark the underlying DictEntry of the
1197 concerned ElValue with "Implicit". This strategy was damageable
1198 too the public or provite dictionaries, since some of their vr
1199 would be changed. Since Header::FindLength heavily relies on the
1200 detection by Header::FindVR of falsely explicit elements, I
1201 added an extra ImplicitVr member to ElValue (boolean).
1202 The rest of the changes we the necessary adaptations.
1204 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1205 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1207 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1209 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1210 * Adaptation for porting to VC++:
1212 o forced to use std namespace (for string to be known)
1213 o all class use __declspec export style on WIN32
1214 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1215 (in stdlib.h on Win32 but in std:: for gcc)
1216 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1217 variable GDCM_DICT_PATH.
1218 * src/gdcmHeader.cxx verbose comments made discrete.
1220 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1221 * python/gdcm.i: added a typemap that converts a C++ hashing table
1222 to native Python dictionary.
1223 * python/demo/test.py:
1224 - now uses the native dictionary for exploration of gdcmHeader.
1225 - takes an optional filename argument (the file to parse).
1226 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1227 PubElVals hashing table.
1228 * Dicts/dicomV3.dic removed error prone trailing spaces.
1230 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1231 * Python wrapping process moved away from src/Makefile to
1232 newly created python/Makefile (as well as gdcm.i)
1233 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1234 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1235 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1236 from the environement variable GDCM_DICT_PATH (when existing).
1237 * src/gdcmDict::GetTag bug fix.
1239 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1240 * Straightforward temporary fixes for swig to build the python wrappers.
1241 src/Makefile now has a python working entry [by working we mean
1242 that we can import de shadow classes without errors].
1244 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1245 * hashtest.cxx removed (since allready in Test)
1246 * src/gdcmlib.h renamed to src/gdcm.h
1247 * src/dcm.i renamed to src/gdcm.i
1248 * src/Makefile prepared for python wrapping
1250 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1251 * src/gdcmHeader.cxx :
1252 - Parsing of header is now separated from loading of element values
1253 (see gdcmHeader::LoadElements).
1254 - general clean up of hopefully all file access (creation of
1255 ReadInt16 and ReadInt32)
1257 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1258 * src/gdcmHeader.cxx :
1259 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1261 - SetLgrElem renamed to SetLength
1262 - GetLgrElem renamed to GetLength
1263 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1264 * src/gdcmElValSet.cxx fixed both GetElValue methods
1265 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1266 due to IdoDude was cleaned out.
1268 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1269 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1270 concentrates on finding the value representation (when it exists).
1271 RecupLgr now only finds the element value length, and it avoids
1272 returning the unecessary skL (skipped length).
1273 Also, offsetCourant was simply removed (with taille_fich) since
1274 it was redundant with the File position internals (by using
1275 ftell and fseek). This also made skL (see above in RecupLgr) usage
1277 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1278 on the libido specificities which are handled through class
1280 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1283 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1284 * Truckload of changes. Parsing of header is barely functional
1285 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1287 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1288 * src/gdcmHeader.cxx many addons of low level methods
1290 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1291 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1292 and _IdDcmSWAP_LONG.
1294 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1295 * This corresponds to all the changes decided at the meeting of
1296 May 23 2002. Needless to say we are running late...