1 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
2 * vtkGdcmReader set spacing and origin correctly
3 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
4 * Fix a few delete/delete[] mismatch
5 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
6 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
7 interpretation to data given by gdcmHeader. For instance there are
8 heuristics to get informations (look at different places).
9 * it also include a specific class: gdcmSerieHeaderHelper devoted to
10 sorting DICOM images based on different strategies.
11 * modified Makefiles accordingly.
12 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
13 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
14 when building in debug mode
15 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
17 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
18 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
19 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
20 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
21 * src/win32/libgdcmjpeg12.dsp was not dos format
22 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
23 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
24 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
25 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
27 * src/gdcmFile.cxx : bug fix in affectation type
28 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
29 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
30 * Modifs of MVSC projects to compile them. Not concerning 2 identic
31 symbols... futur problem ?
32 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
33 * src/win32/libgdcmijpeg12.dsp was missing
34 * modified gdcm.dsw accordingly
35 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
36 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
37 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
38 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
39 commit of JPR (before his hollidays to facilitate our work).
40 * setup.py : bug fix in code. Modifications made while the last commit
41 of JPR. The code hasn't been tested before the commit... it's so
42 useless to make that (for best programmer that is JPR) !!!
43 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
44 * tagged the current version as Version0_3 (i.e. version 0.3)
45 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
46 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
47 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
48 * *.dsp : modifications to use new libgdcmijpeg8 library
49 * setup.py : bug fix on VTKPATH variable
50 * PACKAGER : adding all concerning windows
51 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
52 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
54 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
55 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
56 test suite reported error.
57 * PACKAGER file added (describes what a packager must do when
58 packaging a new release).
59 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
60 * configure.in: upgraded version number to 0.3.0
61 * fixing build of rpm (through rpm -ta):
62 - Doc/Makefile.am exports proper doxygen files
63 - src/jpeg/libijg8/Makefile.am exports the include files.
64 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
65 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
66 * src/gdcmHeader.h : formatting code
67 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
68 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
69 We were obtaining error message from vtk. Now, creation of file list
70 is made in an internal list to prevent this problem.
71 Bug fix when output is empty.
72 Bug fix in update of progress value. Previous commit for this was a bad
74 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
75 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
76 * src/gdcmHeader.h : added method to get the file name
77 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
78 files. Added method to remove all files on the input
79 Added FIXME comment concerning the bad parsing of header made by
80 ExecuteInformation method (in ExecuteData method)
81 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
82 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
83 when using make instal.
84 * src/gdcmFile.cxx : bug fix under Window after JPR commit
85 RQ : the JPR doesn't appear in the ChangeLog... normal for him
86 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
87 * setup.py : adding include dir of jpeg lib to compile all sources
88 * */Win32/*.dsp : JPR fix for windows compilation
89 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
90 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
92 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
93 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
94 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
95 * setup.py is again effective on un*x (takes into account the
96 addon of the jpeg library)
97 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
98 * Doc/Doxy* updated (includes above enhancements)
99 * INSTALL now points to web documentation
100 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
101 * src/gdcmHeader.h doesn't make unnecessary reference to
103 * gdcmPython/Makefile.am now avoids calling the wrappers for the
105 * src/gdcm*.[cxx|h] :
106 - to allow compilation with gcc 3.x
107 -- clean up of STL usage (added explicit usage of std::)
108 -- small fixes on exceptions.
109 Note: linking not tested !
110 - clean of doxygen comments to avoid warnings at documentation
112 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
113 dependent convertion).
114 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
115 * Clean up of previous JPR garbage commit (not even commented in the
117 - Test/Makefile.am removed the reference to unexisting testTS.cxx
118 - moved all jpeg related files from src to src/jpeg/libijg8, with
119 addition/modification of Makefile.am and configure.in.
120 - the testSuite is still brain damage (not guilty).
121 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
122 * WrapVTK.py : modifications to get correctly vtk source files to
124 * vtk/vtkGdcmReader.cxx : modification for an already existing name
125 (FileName -> Filename)
126 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
127 * vtk/vtkGdcmReader.[cxx/h]:
128 - UpdateProgress method should now be effective
129 - removed the limitation on having only images loaded (as opposed
131 - when building a stack of images/volume, a lesser number of
132 gdcmHeader and gdcmFile instances should be used (hopefully
133 accelerating things).
134 - when building a stack of images/volumes, files which are not
135 loadable (wrong path-filename, wrong permissions on existing file,
136 or file not parsable by gdcm) are replaced with a black image
137 in the stack (for the caller to notice the problem).
138 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
139 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
140 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
141 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
142 between standard library (std) and vtk library (problems are found
143 under Windows... thanks Windows !)
144 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
145 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
147 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
148 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
149 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
150 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
151 * When compiling with distutils (see setup.py) the C++ compiler is
152 called with different flags than the default ones (with automake).
153 In order to fix all those warning, I compiled gdcm with the command
154 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
155 and went for warning fixes:
156 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
157 up from unused variables.
158 - vtk/vtkGdcmReader.cxx: potential bug fix.
159 * src/gdcmHeader.h: Doxygen warning cleanup
160 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
162 - typemaps correction to take into account the systematic replacement
163 of "using namespace std" with std:: prefix e.g. std::list,
164 std::string... (cf changes of 2003-05-21).
165 - gdcmGlob global variable of type gdcmGlobal (defined in
166 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
167 exported to Python a as cvar.
168 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
169 and GetPubDictTagNamesByCategory() as a replacement for deprecated
170 gdcmDictSet.GetPubDictTagNames() and
171 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
173 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
174 with the above changes.
175 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
176 * setup.py, manifest.in : bug fix under linux
177 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
178 * Modification of setup.py to compile vtk part too. Then, we have 2
179 wrappers which must work with same distutils. For that, we have a
180 generic distutils in distusiltsWrapping.py ; with :
181 - build_extWrap class to wrap generically all extensions,
182 - ExtensionWrap base class for all wrapping extension that contains
184 - Wrapper interface which wrap sources
185 + In WrapSwig.py we have extension and wrapper for Swig
186 + In WrapVTK.py we have extension and wrapper for VTK
187 * MANIFEST.in : modifications to consider vtk directory and new python
188 files for compilation
189 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
190 * Added python wrappers of vtkGdcmReader vtk class (see the
191 source in vtk/vtkGdcmReader.cxx) :
192 - vtk/Makefile.am now builds a library
193 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
194 python library (as opposed to _gdcm.so wich are the python
195 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
196 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
198 - configure.in has an additional flag --enable-vtk that needs
199 to be set to enable compilation of vtk related code, that is:
200 + vtk/vtkGdcmReader.so and
201 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
202 + gdcmPython/vtkgdcmPython.so (see above)
203 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
204 be read when compressed or when HighBit + 1 != BitsStored),
205 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
206 the usage of the python wrapper of vtkGdcmReader vtk class.
207 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
208 * src/*.[h] all occurences of stl classes are now prefixed with
209 std::, and all occurences of "using namespace std;" where removed.
210 This is to avoid pollution of global namespace in included files.
211 Apparently vtk does not avoid this pitfall: when using both
212 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
213 collision of various stl members (principally cout...).
214 * gdcmPython/testSuite.py now cleanly removes temprory generated
216 * gdcmPython/gdcm.i now declares a typemap for std::string (to
217 comply with above changes)
218 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
219 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
220 * vtk/vtkGdcmReader.cxx now properly inports the image in the
221 vtk data structure (an image Flip was required).
222 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
223 * cosmetic changes in documentation.
224 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
225 * src/gdcmHeader.cxx: the constructor no longer exits when an
226 unexisting file is given as argument.
227 * The subdirectory Data (containing all the images used for the
228 test suite) is not part of this repository anymore. A new module
229 containing those images is now available at
230 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
231 with the name gdcmData.
232 All the python scripts (including the package initialisation file
233 gdcmPython/__init__.py) were adapated to take this change into
234 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
235 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
236 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
237 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
238 demo of the usage of this class.
239 Compilation of this vtk part is only done when using the --enable-vtk
240 at configure (or autogen.sh) stage.
241 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
242 * More memmory link related corrections and documentation fixes.
244 - maximum info is obtained with a command of the form:
245 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
246 --show-reachable=yes PrintHeader
247 - the remaining reachable blocks seem to come from the STL
248 allocation scheme through the usage of map and list. It looks
249 like this memory cannot be freed but it is not a memory leak
250 (in fact further invocation to the STL would recollect the
251 unused memory allthough it cannot explicitely be freed).
252 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
253 of displaying an image parsed with gdcm and displayed with VTK.
254 Note: some images don't seem to work e.g.
255 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
256 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
257 Allthough this weakens the semantics, it is a ditch attempt to
258 make gdcm more thread friendly.
259 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
260 * Memory link hunt (by using valgrind through the command
261 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
262 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
263 gdcmHeader::_dicom_vr.
264 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
265 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
267 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
268 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
269 * src/Makefile.am now exports all the necessary include files at
272 * UpdateGroupLength replaced by new one
274 * UpdateGroupLength re-written using H-Table
275 (named UpdateGroupLengthNew untill checks are over)
277 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
278 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
279 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
281 - gdcmHeader::GetPubElValSet removed.
282 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
283 UpdateGroupLength, WriteElements, Write.
284 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
285 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
286 carried the same semantics.
287 - src/gdcmHeaderIdo.cxx changed accordingly.
288 - gdcmFile::WriteBase now regroups all the codes from previous
289 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
290 - enum FileType moved to gdcmCommon.h
291 * src/gdcmHeader.cxx AddDefault trashed
293 * getimageDataSize now calls gdcmGetXSize
294 * Test/*.cxx changed to agree with above changes
295 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
296 * src/gdcmHeader.h: LoadElements() is not a public method anymore
297 (to avoid double call by end user).
298 * Test/*.cxx LoadElements() doesn't need to be called explicitely
299 by end user, since gdcmHeader::gdcmHeader now handles it.
300 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
301 * gdcm/Doc many doxygen changes:
302 - Doxyfile now has two different versions, DoxyfileUsers that generates
303 the html.users end users oriented documentation and
304 DoxyfileDeveloppers that generates the html.developper developper
305 oriented documentation.
306 - README changed accordingly
307 - requirement.txt removed (old design info moved to TODO).
308 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
309 DoxyMainPage.txt, DoxyPython.txt provide more information.
310 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
311 be updated by simply regenerating the docs with doxygen and copying
312 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
313 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
314 all the tests in the form "if (<map>.count() >1)" were removed.
315 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
316 ill-formed documentation sections.
317 * src/gdcmHeader.cxx: ditto
318 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
319 * setup.py fixed for un*x (needed macro for stdint.h)
320 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
321 un*ces with sh-utils test utility.
322 * gdcmPython/demo/test.py renamed to PrintHeader.py
323 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
324 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
325 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
326 * src/gdcm*.cxx JPR's bad inclusion fixed.
327 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
328 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
329 * gdcmPython/demo/test.py changed accordingly.
330 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
331 * gdcmPython/Makefile.am fixed linking against libstdc++
332 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
333 * Swig subdir (historical tests of swig version 1.3.17++) removed
334 * Test/testChangeEntete.cxx some lines commented out in order to make
336 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
337 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
338 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
339 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
340 hence the user doesn't need this explicit call.
341 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
342 i.e. LoadElements() call removed.
343 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
344 - src/Makefile.am declares the proper flag for g++.
345 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
346 for adding user defined new tags.
347 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
348 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
349 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
350 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
351 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
352 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
353 src/Makefile.am : the project should properly compile and install
354 with the autotools, included the python wrappers part.
355 * gdcm.spec.in : added a spec file for RPM packaging.
356 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
357 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
358 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
359 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
360 to exported to the environement (see gdcmPython/testSuite.py
362 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
363 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
364 ElValue class renamed to gdcmElValue for obvious consistency reasons.
365 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
366 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
367 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
368 * gdcmPython/__init__.py doesn't crash anymore when running in
369 in InstallMode or PreInstallMode but with an environement given
370 value of GDCM_DICT_PATH.
371 * src/gdcmDictSet.[cxx/h] coding style.
372 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
373 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
374 * src/gdcm.h general comments moved to TODO, and README
375 * src/gdcm.h should now be seen as a user commodity (including it
376 should suffice to fully use gdcm). It is nowhere including within
377 any of the kernel files src/*.cxx and src/*.h.
378 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
379 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
380 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
382 * src/gdcm*.cxx only include their corresponding include file
383 (as opposed to gdcm.h)
384 * gdcmPython/gdcm.i changed accordingly
385 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
386 the autogen.sh generated "make snapshot" command to work.
387 * autogen.sh removed history related references to crea package.
388 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
389 * distutilsSwigCPlusPlus.py work around some swig portability
391 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
392 * Eventually, python/gdcmPython was renamed to gdcmPython. This
393 was done in a last ditch attempt to get setup.py _really_
394 operationnal. The python/gdcmPython layaout add the advantage
395 of hidding away the python related distutils specific files
396 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
397 Alas, the src directory was out of scope (i.e. it's relative
398 position to setup.py was ../src) which made things impossible to
399 handle (see previous version of python/setup.py). Crossing fingers...
400 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
401 * python/setup.py now works on Un*x. (harder than I thougth)
402 * python/distutilsSwigCPlusPlus.py can now have include files
403 among the list of sources.
405 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
406 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
407 * modifications in MSVC projects
408 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
409 * As stated by the first lines of Test/ExceptionAndPython/README, it
410 looks like we can move back to original usage of exception within
411 src/gdcm* and hence remove the errno stuff that was introduced
412 as a quick and dirty fixture of this problem (added to the TODO).
413 * Doc/Doxyfile configuration file for Doxygen and corresponding
414 README file for usage added.
415 * Test/testWrite.cxx added. This new test comes from a split of
416 test.cxx that is now reverted to its original purpous i.e.
417 testing the proper parsing of a Dicom related file.
418 testWrite.cxx concentrates on testing the IO part of gdcm.
419 * Test/bug1.cxx (containing a bug on WIn32) added.
420 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
421 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
422 whose purpose is to publish the content of the TagNames of the
423 Dicom public dictionnary were not accessible without an
424 instance of class gdcmHeader.
425 - those methods are now static methods of gdcmDictSet and hence
426 require no instances at all to be invocated.
427 - within gdcmDictSet this change required to change some method
428 to class methods (i.e. are now static) among which SetDictPath
429 (renamed to BuildDictPath) and LoadDefaultPubDict.
430 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
431 the above changes by calling the new method classes of gdcmDictSet.
432 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
433 the above to be effective.
434 * python/gdcmPython: in order to wrap properly the above changes
435 for Python, swig version now needs to be > 1.3.17.
436 * python/gdcmPython/Makefile fixed to adapt itself to new
437 configure/make shema introduced by Johan Montagnat (thanks for the
438 contribution). Alas this Makefile cannot be turned into a proper
439 Makefile.am without some heavy changes in the configure.in
440 (for python dectection).
441 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
442 now avoids publishing the empty entries.
443 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
444 * python/setup.py : bug fix concerning install under windows
446 * gdcm.dsw : bug fix concerning path for libraries for python !!!
447 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
448 * Dicts/dicomV3.dic : remove double spaces !!!
449 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
450 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
452 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
453 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
454 method. Doxygenation.
455 * src/gdcm.h clean up of JPR spurious comments.
456 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
457 * python/distutilsSwigCPlusPlus.py now properly collects the
458 shadow classes generated by "swig -c++" (gdcm.py in our case)
459 when using "python setup.py install".
460 * python/gdcmPython/__init__.py imports gdcm.py and only manually
461 reexports the working classes.
462 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
463 by the classical C errno scheme. This is to prevent an obscure
464 behavior of the python wrappers when importing wxPython.wx prior
465 to gdcmPython (which ended up in an abort call). An illustration
466 of this oddity can be found in the Test/ExceptionAndPython
467 subdir (see the README file). This problem probably due to
468 an combination of g++ and dynamic loading.
469 * added Test/ExceptionAndPython (see above)
470 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
471 * Changed the layout of the python part to avoid bloating main
472 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
473 i.e. the distutils arsenal. All the python related stuff is
474 again in a python subdir, but the package itself is now in
476 * setup.py was cleaned up:
477 - pythonIncludePath removed
478 - python setup.py bdist target is now functional.
479 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
480 collision with other packages). gdcmPython/demo/*.py changed
482 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
483 * python subdir moved to gdcmPython (preparation of distutils packaging).
484 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
485 distutils installer is operational.
486 * - gdcmPython/__init__.py now properly loads the swig generated
487 shadow classes (from gdcm.py).
488 - gdcmPython/demo/*.py changed to import the package gdcmPython
489 instead of gdcmPython/demo/load.py.
490 - gdcmPython/testSuite.py changed to import the package gdcmPython.
492 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
493 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
494 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
495 entries within the associated public Dicom dictionary resp. the same
496 information but sorted by the fourth field (PAT, IMG, DIR) of the
498 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
499 are now in the "???" group.
500 - python/gdcm.i changed accordingly,
501 - python/demo/printGroupedPublicDict.py added, that gives an example
502 of the above new functionalities in Python.
503 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
504 * src/gdcm.h, gdcmHeader.cxx:
505 - historic references to glib's g_malloc and g_free (#defined)
506 were definitively removed.
507 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
508 * src/gdcmElValSet.cxx:
509 - GetElement(guint32, guint32) renamed to GetElementByNumber.
510 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
511 - GetElValue(string) renamed to GetElValueByName.
512 - Added GetElementByName(string).
513 * src/gdcmHeader.cxx: added
514 - GetPubElValRepByNumber(guint16, guint16)
515 - GetPubElValRepByName(string)
516 - GetShaElValRepByNumber(guint16, guint16)
517 - GetShaElValRepByName(string)
518 - GetShaElValByNumber(guint16, guint16)
519 - GetShaElValRepByName(string)
520 - GetElValRepByNumber(guint16, guint16)
521 - GetElValRepByName(string)
522 - GetElValByNumber(guint16, guint16)
523 - GetElValRepByName(string)
524 * Doc/requirements.txt added.
525 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
526 * Test/Makefile building now depends on the one of libgdcm.so
527 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
528 pixel data) aware which enables finding the address (offset) of
529 the pixel data of JPEG encoded DICOM files. This leaves only a single
530 file in the testSuite whose pixel data address (offset) is unknown.
531 * python/testSuite.py changed accordingly.
532 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
533 * VC++ has some strong limitations when working with the STL, as stated
534 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
535 "Also note that some STL containers (map, set, queue, list, deque)
536 cannot be exported. [...]
537 Some STL classes contain nested classes. These classes can not
539 This is caused by a designed limitation that once a template
540 class is instantiated, it can not be re-instantiated and
542 Since our usage of map<> is ubiquitous in gdcm, this "designed
543 limitation" of VC++ is a pitfall.
544 Hence the Python wrappers of gdcm cannot be incrementally linked
545 against the c++ dynamic library. The dirty but only workaround is
546 to forget about incremental link of dynamic libraries and to generate
547 the Python wrappers library with the inclusions of the underlying C++
549 The following modifications concern this matter on Win32/VC++:
550 - wrapping python correct with standalone wrapped dll (don't use separate
551 dll under windows !!!!)
552 - python21_d debug mode enabled (ask Frog how to use it :-)
553 - NO problem with having an STL member of class for example string in C++
554 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
555 - Python test of dcmlib in Python is ok under windows on a large set
557 * removed glib references
558 * typedef's inserted in gdcm.i for correct swig type management
559 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
560 * python/demo/*.py load.py extracted from test.py. Added explore.py
561 that only displays required tags and testAll.py that parses all
562 the files of the testsuite without using unittest.
563 * python/testSuite.py other additional test on new files added.
564 * Data/* new test files added accordingly to the testSuite.
565 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
566 the vr in the file differs from the one of the dictionary.
567 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
568 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
569 values, but limits itself to values which are below a user specified
570 size (by default 1024 bytes).
571 * python/gdcm.i : elements not loaded (because their size is above the
572 user specified treshold) are exported with their TagKey as key of the
573 python dictionary. This enables the testsuite to make some checks
574 on the unloaded elements (since we have their offset and size).
575 * python/testSuite.py
576 - now tests for the existence and proper value of the pixel data
577 - two new examples added.
578 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
579 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
580 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
581 aware. See the strategy comments in gdcmHeader::FindeLength().
582 * Test/test.cxx now accepts a filename as first argument.
583 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
584 * python/testSuite.py changed to integrate test on above files.
585 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
586 * Dicts/dicomV3.dic removed all the trailing (RET) when the
588 * python/testSuite.py more tests added.
589 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
590 * python/testSuite.py unittest test suite added (uses Data)
591 * Data/* dcm and acr files for the test suite.
592 * glib dependance removed from un*x version. We now use ISO C99
593 7.18 Integer types (see stdint.h)
594 - python/Makefile, src/Makefile src/gdcm.h
595 * src/ when an explicit vr (like dicom files) suddenly poped an
596 implicit element we use to mark the underlying DictEntry of the
597 concerned ElValue with "Implicit". This strategy was damageable
598 too the public or provite dictionaries, since some of their vr
599 would be changed. Since Header::FindLength heavily relies on the
600 detection by Header::FindVR of falsely explicit elements, I
601 added an extra ImplicitVr member to ElValue (boolean).
602 The rest of the changes we the necessary adaptations.
603 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
604 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
606 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
607 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
608 * Adaptation for porting to VC++:
610 o forced to use std namespace (for string to be known)
611 o all class use __declspec export style on WIN32
612 - src/gdcmUtil.cxx new Exit method that wraps the exit call
613 (in stdlib.h on Win32 but in std:: for gcc)
614 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
615 variable GDCM_DICT_PATH.
616 * src/gdcmHeader.cxx verbose comments made discrete.
617 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
618 * python/gdcm.i: added a typemap that converts a C++ hashing table
619 to native Python dictionary.
620 * python/demo/test.py:
621 - now uses the native dictionary for exploration of gdcmHeader.
622 - takes an optional filename argument (the file to parse).
623 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
624 PubElVals hashing table.
625 * Dicts/dicomV3.dic removed error prone trailing spaces.
626 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
627 * Python wrapping process moved away from src/Makefile to
628 newly created python/Makefile (as well as gdcm.i)
629 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
630 * src/gdcmHeader::FindLength only looks for current vr when necessary.
631 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
632 from the environement variable GDCM_DICT_PATH (when existing).
633 * src/gdcmDict::GetTag bug fix.
634 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
635 * Straightforward temporary fixes for swig to build the python wrappers.
636 src/Makefile now has a python working entry [by working we mean
637 that we can import de shadow classes without errors].
638 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
639 * hashtest.cxx removed (since allready in Test)
640 * src/gdcmlib.h renamed to src/gdcm.h
641 * src/dcm.i renamed to src/gdcm.i
642 * src/Makefile prepared for python wrapping
643 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
644 * src/gdcmHeader.cxx :
645 - Parsing of header is now separated from loading of element values
646 (see gdcmHeader::LoadElements).
647 - general clean up of hopefully all file access (creation of
648 ReadInt16 and ReadInt32)
649 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
650 * src/gdcmHeader.cxx :
651 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
653 - SetLgrElem renamed to SetLength
654 - GetLgrElem renamed to GetLength
655 - ~gdcmHeader() made virtual to pesky warning messages at compile.
656 * src/gdcmElValSet.cxx fixed both GetElValue methods
657 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
658 due to IdoDude was cleaned out.
659 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
660 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
661 concentrates on finding the value representation (when it exists).
662 RecupLgr now only finds the element value length, and it avoids
663 returning the unecessary skL (skipped length).
664 Also, offsetCourant was simply removed (with taille_fich) since
665 it was redundant with the File position internals (by using
666 ftell and fseek). This also made skL (see above in RecupLgr) usage
668 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
669 on the libido specificities which are handled through class
671 * Test/implicit_vr.dcm dicom v3 in implicit value representation
673 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
674 * Truckload of changes. Parsing of header is barely functional
675 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
676 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
677 * src/gdcmHeader.cxx many addons of low level methods
678 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
679 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
681 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
682 * This corresponds to all the changes decided at the meeting of
683 May 23 2002. Needless to say we are running late...