1 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
2 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
3 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
4 * *.dsp : modifications to use new libgdcmijpeg8 library
5 * setup.py : bug fix on VTKPATH variable
6 * PACKAGER : adding all concerning windows
8 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
9 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
11 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
12 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
13 test suite reported error.
14 * PACKAGER file added (describes what a packager must do when
15 packaging a new release).
16 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
17 * configure.in: upgraded version number to 0.3.0
18 * fixing build of rpm (through rpm -ta):
19 - Doc/Makefile.am exports proper doxygen files
20 - src/jpeg/libijg8/Makefile.am exports the include files.
22 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
23 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
24 * src/gdcmHeader.h : formatting code
26 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
27 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
28 We were obtaining error message from vtk. Now, creation of file list
29 is made in an internal list to prevent this problem.
30 Bug fix when output is empty.
31 Bug fix in update of progress value. Previous commit for this was a bad
33 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
35 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
36 * src/gdcmHeader.h : added method to get the file name
37 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
38 files. Added method to remove all files on the input
39 Added FIXME comment concerning the bad parsing of header made by
40 ExecuteInformation method (in ExecuteData method)
42 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
43 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
44 when using make instal.
45 * src/gdcmFile.cxx : bug fix under Window after JPR commit
46 RQ : the JPR doesn't appear in the ChangeLog... normal for him
48 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
49 * setup.py : adding include dir of jpeg lib to compile all sources
50 * */Win32/*.dsp : JPR fix for windows compilation
52 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
53 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
55 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
56 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
58 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
59 * setup.py is again effective on un*x (takes into account the
60 addon of the jpeg library)
61 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
62 * Doc/Doxy* updated (includes above enhancements)
63 * INSTALL now points to web documentation
65 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
66 * src/gdcmHeader.h doesn't make unnecessary reference to
68 * gdcmPython/Makefile.am now avoids calling the wrappers for the
71 - to allow compilation with gcc 3.x
72 -- clean up of STL usage (added explicit usage of std::)
73 -- small fixes on exceptions.
74 Note: linking not tested !
75 - clean of doxygen comments to avoid warnings at documentation
77 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
78 dependent convertion).
80 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
81 * Clean up of previous JPR garbage commit (not even commented in the
83 - Test/Makefile.am removed the reference to unexisting testTS.cxx
84 - moved all jpeg related files from src to src/jpeg/libijg8, with
85 addition/modification of Makefile.am and configure.in.
86 - the testSuite is still brain damage (not guilty).
88 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
89 * WrapVTK.py : modifications to get correctly vtk source files to
91 * vtk/vtkGdcmReader.cxx : modification for an already existing name
92 (FileName -> Filename)
94 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
95 * vtk/vtkGdcmReader.[cxx/h]:
96 - UpdateProgress method should now be effective
97 - removed the limitation on having only images loaded (as opposed
99 - when building a stack of images/volume, a lesser number of
100 gdcmHeader and gdcmFile instances should be used (hopefully
101 accelerating things).
102 - when building a stack of images/volumes, files which are not
103 loadable (wrong path-filename, wrong permissions on existing file,
104 or file not parsable by gdcm) are replaced with a black image
105 in the stack (for the caller to notice the problem).
107 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
108 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
110 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
111 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
112 between standard library (std) and vtk library (problems are found
113 under Windows... thanks Windows !)
115 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
116 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
118 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
120 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
121 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
123 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
124 * When compiling with distutils (see setup.py) the C++ compiler is
125 called with different flags than the default ones (with automake).
126 In order to fix all those warning, I compiled gdcm with the command
127 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
128 and went for warning fixes:
129 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
130 up from unused variables.
131 - vtk/vtkGdcmReader.cxx: potential bug fix.
132 * src/gdcmHeader.h: Doxygen warning cleanup
134 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
136 - typemaps correction to take into account the systematic replacement
137 of "using namespace std" with std:: prefix e.g. std::list,
138 std::string... (cf changes of 2003-05-21).
139 - gdcmGlob global variable of type gdcmGlobal (defined in
140 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
141 exported to Python a as cvar.
142 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
143 and GetPubDictTagNamesByCategory() as a replacement for deprecated
144 gdcmDictSet.GetPubDictTagNames() and
145 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
147 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
148 with the above changes.
150 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
151 * setup.py, manifest.in : bug fix under linux
153 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
154 * Modification of setup.py to compile vtk part too. Then, we have 2
155 wrappers which must work with same distutils. For that, we have a
156 generic distutils in distusiltsWrapping.py ; with :
157 - build_extWrap class to wrap generically all extensions,
158 - ExtensionWrap base class for all wrapping extension that contains
160 - Wrapper interface which wrap sources
161 + In WrapSwig.py we have extension and wrapper for Swig
162 + In WrapVTK.py we have extension and wrapper for VTK
163 * MANIFEST.in : modifications to consider vtk directory and new python
164 files for compilation
166 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
167 * Added python wrappers of vtkGdcmReader vtk class (see the
168 source in vtk/vtkGdcmReader.cxx) :
169 - vtk/Makefile.am now builds a library
170 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
171 python library (as opposed to _gdcm.so wich are the python
172 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
173 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
175 - configure.in has an additional flag --enable-vtk that needs
176 to be set to enable compilation of vtk related code, that is:
177 + vtk/vtkGdcmReader.so and
178 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
179 + gdcmPython/vtkgdcmPython.so (see above)
180 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
181 be read when compressed or when HighBit + 1 != BitsStored),
182 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
183 the usage of the python wrapper of vtkGdcmReader vtk class.
184 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
185 * src/*.[h] all occurences of stl classes are now prefixed with
186 std::, and all occurences of "using namespace std;" where removed.
187 This is to avoid pollution of global namespace in included files.
188 Apparently vtk does not avoid this pitfall: when using both
189 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
190 collision of various stl members (principally cout...).
191 * gdcmPython/testSuite.py now cleanly removes temprory generated
193 * gdcmPython/gdcm.i now declares a typemap for std::string (to
194 comply with above changes)
196 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
197 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
198 * vtk/vtkGdcmReader.cxx now properly inports the image in the
199 vtk data structure (an image Flip was required).
200 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
201 * cosmetic changes in documentation.
203 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
204 * src/gdcmHeader.cxx: the constructor no longer exits when an
205 unexisting file is given as argument.
206 * The subdirectory Data (containing all the images used for the
207 test suite) is not part of this repository anymore. A new module
208 containing those images is now available at
209 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
210 with the name gdcmData.
211 All the python scripts (including the package initialisation file
212 gdcmPython/__init__.py) were adapated to take this change into
213 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
215 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
216 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
217 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
218 demo of the usage of this class.
219 Compilation of this vtk part is only done when using the --enable-vtk
220 at configure (or autogen.sh) stage.
222 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
223 * More memmory link related corrections and documentation fixes.
225 - maximum info is obtained with a command of the form:
226 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
227 --show-reachable=yes PrintHeader
228 - the remaining reachable blocks seem to come from the STL
229 allocation scheme through the usage of map and list. It looks
230 like this memory cannot be freed but it is not a memory leak
231 (in fact further invocation to the STL would recollect the
232 unused memory allthough it cannot explicitely be freed).
233 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
234 of displaying an image parsed with gdcm and displayed with VTK.
235 Note: some images don't seem to work e.g.
236 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
237 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
238 Allthough this weakens the semantics, it is a ditch attempt to
239 make gdcm more thread friendly.
241 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
242 * Memory link hunt (by using valgrind through the command
243 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
244 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
245 gdcmHeader::_dicom_vr.
246 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
247 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
249 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
251 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
252 * src/Makefile.am now exports all the necessary include files at
256 * UpdateGroupLength replaced by new one
259 * UpdateGroupLength re-written using H-Table
260 (named UpdateGroupLengthNew untill checks are over)
262 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
263 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
264 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
266 - gdcmHeader::GetPubElValSet removed.
267 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
268 UpdateGroupLength, WriteElements, Write.
269 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
270 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
271 carried the same semantics.
272 - src/gdcmHeaderIdo.cxx changed accordingly.
273 - gdcmFile::WriteBase now regroups all the codes from previous
274 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
275 - enum FileType moved to gdcmCommon.h
276 * src/gdcmHeader.cxx AddDefault trashed
278 * getimageDataSize now calls gdcmGetXSize
279 * Test/*.cxx changed to agree with above changes
281 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
282 * src/gdcmHeader.h: LoadElements() is not a public method anymore
283 (to avoid double call by end user).
284 * Test/*.cxx LoadElements() doesn't need to be called explicitely
285 by end user, since gdcmHeader::gdcmHeader now handles it.
287 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
288 * gdcm/Doc many doxygen changes:
289 - Doxyfile now has two different versions, DoxyfileUsers that generates
290 the html.users end users oriented documentation and
291 DoxyfileDeveloppers that generates the html.developper developper
292 oriented documentation.
293 - README changed accordingly
294 - requirement.txt removed (old design info moved to TODO).
295 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
296 DoxyMainPage.txt, DoxyPython.txt provide more information.
297 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
298 be updated by simply regenerating the docs with doxygen and copying
299 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
300 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
301 all the tests in the form "if (<map>.count() >1)" were removed.
302 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
303 ill-formed documentation sections.
304 * src/gdcmHeader.cxx: ditto
306 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
307 * setup.py fixed for un*x (needed macro for stdint.h)
308 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
309 un*ces with sh-utils test utility.
310 * gdcmPython/demo/test.py renamed to PrintHeader.py
311 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
312 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
313 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
314 * src/gdcm*.cxx JPR's bad inclusion fixed.
316 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
317 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
318 * gdcmPython/demo/test.py changed accordingly.
320 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
321 * gdcmPython/Makefile.am fixed linking against libstdc++
322 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
323 * Swig subdir (historical tests of swig version 1.3.17++) removed
324 * Test/testChangeEntete.cxx some lines commented out in order to make
326 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
327 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
329 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
330 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
331 hence the user doesn't need this explicit call.
332 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
333 i.e. LoadElements() call removed.
334 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
335 - src/Makefile.am declares the proper flag for g++.
336 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
337 for adding user defined new tags.
338 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
339 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
340 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
342 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
343 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
344 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
345 src/Makefile.am : the project should properly compile and install
346 with the autotools, included the python wrappers part.
347 * gdcm.spec.in : added a spec file for RPM packaging.
349 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
350 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
352 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
353 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
354 to exported to the environement (see gdcmPython/testSuite.py
356 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
357 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
358 ElValue class renamed to gdcmElValue for obvious consistency reasons.
359 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
360 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
362 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
363 * gdcmPython/__init__.py doesn't crash anymore when running in
364 in InstallMode or PreInstallMode but with an environement given
365 value of GDCM_DICT_PATH.
366 * src/gdcmDictSet.[cxx/h] coding style.
368 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
369 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
370 * src/gdcm.h general comments moved to TODO, and README
371 * src/gdcm.h should now be seen as a user commodity (including it
372 should suffice to fully use gdcm). It is nowhere including within
373 any of the kernel files src/*.cxx and src/*.h.
375 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
376 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
377 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
379 * src/gdcm*.cxx only include their corresponding include file
380 (as opposed to gdcm.h)
381 * gdcmPython/gdcm.i changed accordingly
382 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
383 the autogen.sh generated "make snapshot" command to work.
384 * autogen.sh removed history related references to crea package.
386 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
387 * distutilsSwigCPlusPlus.py work around some swig portability
390 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
391 * Eventually, python/gdcmPython was renamed to gdcmPython. This
392 was done in a last ditch attempt to get setup.py _really_
393 operationnal. The python/gdcmPython layaout add the advantage
394 of hidding away the python related distutils specific files
395 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
396 Alas, the src directory was out of scope (i.e. it's relative
397 position to setup.py was ../src) which made things impossible to
398 handle (see previous version of python/setup.py). Crossing fingers...
400 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
401 * python/setup.py now works on Un*x. (harder than I thougth)
402 * python/distutilsSwigCPlusPlus.py can now have include files
403 among the list of sources.
405 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
406 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
407 * modifications in MSVC projects
409 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
410 * As stated by the first lines of Test/ExceptionAndPython/README, it
411 looks like we can move back to original usage of exception within
412 src/gdcm* and hence remove the errno stuff that was introduced
413 as a quick and dirty fixture of this problem (added to the TODO).
414 * Doc/Doxyfile configuration file for Doxygen and corresponding
415 README file for usage added.
416 * Test/testWrite.cxx added. This new test comes from a split of
417 test.cxx that is now reverted to its original purpous i.e.
418 testing the proper parsing of a Dicom related file.
419 testWrite.cxx concentrates on testing the IO part of gdcm.
420 * Test/bug1.cxx (containing a bug on WIn32) added.
421 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
422 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
423 whose purpose is to publish the content of the TagNames of the
424 Dicom public dictionnary were not accessible without an
425 instance of class gdcmHeader.
426 - those methods are now static methods of gdcmDictSet and hence
427 require no instances at all to be invocated.
428 - within gdcmDictSet this change required to change some method
429 to class methods (i.e. are now static) among which SetDictPath
430 (renamed to BuildDictPath) and LoadDefaultPubDict.
431 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
432 the above changes by calling the new method classes of gdcmDictSet.
433 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
434 the above to be effective.
435 * python/gdcmPython: in order to wrap properly the above changes
436 for Python, swig version now needs to be > 1.3.17.
437 * python/gdcmPython/Makefile fixed to adapt itself to new
438 configure/make shema introduced by Johan Montagnat (thanks for the
439 contribution). Alas this Makefile cannot be turned into a proper
440 Makefile.am without some heavy changes in the configure.in
441 (for python dectection).
442 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
443 now avoids publishing the empty entries.
445 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
446 * python/setup.py : bug fix concerning install under windows
448 * gdcm.dsw : bug fix concerning path for libraries for python !!!
450 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
451 * Dicts/dicomV3.dic : remove double spaces !!!
452 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
453 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
456 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
457 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
458 method. Doxygenation.
459 * src/gdcm.h clean up of JPR spurious comments.
461 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
462 * python/distutilsSwigCPlusPlus.py now properly collects the
463 shadow classes generated by "swig -c++" (gdcm.py in our case)
464 when using "python setup.py install".
465 * python/gdcmPython/__init__.py imports gdcm.py and only manually
466 reexports the working classes.
467 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
468 by the classical C errno scheme. This is to prevent an obscure
469 behavior of the python wrappers when importing wxPython.wx prior
470 to gdcmPython (which ended up in an abort call). An illustration
471 of this oddity can be found in the Test/ExceptionAndPython
472 subdir (see the README file). This problem probably due to
473 an combination of g++ and dynamic loading.
474 * added Test/ExceptionAndPython (see above)
476 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
477 * Changed the layout of the python part to avoid bloating main
478 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
479 i.e. the distutils arsenal. All the python related stuff is
480 again in a python subdir, but the package itself is now in
482 * setup.py was cleaned up:
483 - pythonIncludePath removed
484 - python setup.py bdist target is now functional.
485 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
486 collision with other packages). gdcmPython/demo/*.py changed
488 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
489 * python subdir moved to gdcmPython (preparation of distutils packaging).
490 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
491 distutils installer is operational.
492 * - gdcmPython/__init__.py now properly loads the swig generated
493 shadow classes (from gdcm.py).
494 - gdcmPython/demo/*.py changed to import the package gdcmPython
495 instead of gdcmPython/demo/load.py.
496 - gdcmPython/testSuite.py changed to import the package gdcmPython.
499 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
500 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
501 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
502 entries within the associated public Dicom dictionary resp. the same
503 information but sorted by the fourth field (PAT, IMG, DIR) of the
505 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
506 are now in the "???" group.
507 - python/gdcm.i changed accordingly,
508 - python/demo/printGroupedPublicDict.py added, that gives an example
509 of the above new functionalities in Python.
511 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
512 * src/gdcm.h, gdcmHeader.cxx:
513 - historic references to glib's g_malloc and g_free (#defined)
514 were definitively removed.
515 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
516 * src/gdcmElValSet.cxx:
517 - GetElement(guint32, guint32) renamed to GetElementByNumber.
518 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
519 - GetElValue(string) renamed to GetElValueByName.
520 - Added GetElementByName(string).
521 * src/gdcmHeader.cxx: added
522 - GetPubElValRepByNumber(guint16, guint16)
523 - GetPubElValRepByName(string)
524 - GetShaElValRepByNumber(guint16, guint16)
525 - GetShaElValRepByName(string)
526 - GetShaElValByNumber(guint16, guint16)
527 - GetShaElValRepByName(string)
528 - GetElValRepByNumber(guint16, guint16)
529 - GetElValRepByName(string)
530 - GetElValByNumber(guint16, guint16)
531 - GetElValRepByName(string)
532 * Doc/requirements.txt added.
534 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
535 * Test/Makefile building now depends on the one of libgdcm.so
536 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
537 pixel data) aware which enables finding the address (offset) of
538 the pixel data of JPEG encoded DICOM files. This leaves only a single
539 file in the testSuite whose pixel data address (offset) is unknown.
540 * python/testSuite.py changed accordingly.
542 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
543 * VC++ has some strong limitations when working with the STL, as stated
544 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
545 "Also note that some STL containers (map, set, queue, list, deque)
546 cannot be exported. [...]
547 Some STL classes contain nested classes. These classes can not
549 This is caused by a designed limitation that once a template
550 class is instantiated, it can not be re-instantiated and
552 Since our usage of map<> is ubiquitous in gdcm, this "designed
553 limitation" of VC++ is a pitfall.
554 Hence the Python wrappers of gdcm cannot be incrementally linked
555 against the c++ dynamic library. The dirty but only workaround is
556 to forget about incremental link of dynamic libraries and to generate
557 the Python wrappers library with the inclusions of the underlying C++
559 The following modifications concern this matter on Win32/VC++:
560 - wrapping python correct with standalone wrapped dll (don't use separate
561 dll under windows !!!!)
562 - python21_d debug mode enabled (ask Frog how to use it :-)
563 - NO problem with having an STL member of class for example string in C++
564 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
565 - Python test of dcmlib in Python is ok under windows on a large set
567 * removed glib references
568 * typedef's inserted in gdcm.i for correct swig type management
570 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
571 * python/demo/*.py load.py extracted from test.py. Added explore.py
572 that only displays required tags and testAll.py that parses all
573 the files of the testsuite without using unittest.
574 * python/testSuite.py other additional test on new files added.
575 * Data/* new test files added accordingly to the testSuite.
576 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
577 the vr in the file differs from the one of the dictionary.
579 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
580 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
581 values, but limits itself to values which are below a user specified
582 size (by default 1024 bytes).
583 * python/gdcm.i : elements not loaded (because their size is above the
584 user specified treshold) are exported with their TagKey as key of the
585 python dictionary. This enables the testsuite to make some checks
586 on the unloaded elements (since we have their offset and size).
587 * python/testSuite.py
588 - now tests for the existence and proper value of the pixel data
589 - two new examples added.
590 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
592 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
593 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
594 aware. See the strategy comments in gdcmHeader::FindeLength().
595 * Test/test.cxx now accepts a filename as first argument.
596 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
597 * python/testSuite.py changed to integrate test on above files.
599 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
600 * Dicts/dicomV3.dic removed all the trailing (RET) when the
602 * python/testSuite.py more tests added.
604 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
605 * python/testSuite.py unittest test suite added (uses Data)
606 * Data/* dcm and acr files for the test suite.
607 * glib dependance removed from un*x version. We now use ISO C99
608 7.18 Integer types (see stdint.h)
609 - python/Makefile, src/Makefile src/gdcm.h
610 * src/ when an explicit vr (like dicom files) suddenly poped an
611 implicit element we use to mark the underlying DictEntry of the
612 concerned ElValue with "Implicit". This strategy was damageable
613 too the public or provite dictionaries, since some of their vr
614 would be changed. Since Header::FindLength heavily relies on the
615 detection by Header::FindVR of falsely explicit elements, I
616 added an extra ImplicitVr member to ElValue (boolean).
617 The rest of the changes we the necessary adaptations.
619 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
620 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
622 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
624 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
625 * Adaptation for porting to VC++:
627 o forced to use std namespace (for string to be known)
628 o all class use __declspec export style on WIN32
629 - src/gdcmUtil.cxx new Exit method that wraps the exit call
630 (in stdlib.h on Win32 but in std:: for gcc)
631 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
632 variable GDCM_DICT_PATH.
633 * src/gdcmHeader.cxx verbose comments made discrete.
635 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
636 * python/gdcm.i: added a typemap that converts a C++ hashing table
637 to native Python dictionary.
638 * python/demo/test.py:
639 - now uses the native dictionary for exploration of gdcmHeader.
640 - takes an optional filename argument (the file to parse).
641 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
642 PubElVals hashing table.
643 * Dicts/dicomV3.dic removed error prone trailing spaces.
645 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
646 * Python wrapping process moved away from src/Makefile to
647 newly created python/Makefile (as well as gdcm.i)
648 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
649 * src/gdcmHeader::FindLength only looks for current vr when necessary.
650 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
651 from the environement variable GDCM_DICT_PATH (when existing).
652 * src/gdcmDict::GetTag bug fix.
654 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
655 * Straightforward temporary fixes for swig to build the python wrappers.
656 src/Makefile now has a python working entry [by working we mean
657 that we can import de shadow classes without errors].
659 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
660 * hashtest.cxx removed (since allready in Test)
661 * src/gdcmlib.h renamed to src/gdcm.h
662 * src/dcm.i renamed to src/gdcm.i
663 * src/Makefile prepared for python wrapping
665 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
666 * src/gdcmHeader.cxx :
667 - Parsing of header is now separated from loading of element values
668 (see gdcmHeader::LoadElements).
669 - general clean up of hopefully all file access (creation of
670 ReadInt16 and ReadInt32)
672 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
673 * src/gdcmHeader.cxx :
674 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
676 - SetLgrElem renamed to SetLength
677 - GetLgrElem renamed to GetLength
678 - ~gdcmHeader() made virtual to pesky warning messages at compile.
679 * src/gdcmElValSet.cxx fixed both GetElValue methods
680 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
681 due to IdoDude was cleaned out.
683 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
684 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
685 concentrates on finding the value representation (when it exists).
686 RecupLgr now only finds the element value length, and it avoids
687 returning the unecessary skL (skipped length).
688 Also, offsetCourant was simply removed (with taille_fich) since
689 it was redundant with the File position internals (by using
690 ftell and fseek). This also made skL (see above in RecupLgr) usage
692 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
693 on the libido specificities which are handled through class
695 * Test/implicit_vr.dcm dicom v3 in implicit value representation
698 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
699 * Truckload of changes. Parsing of header is barely functional
700 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
702 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
703 * src/gdcmHeader.cxx many addons of low level methods
705 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
706 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
709 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
710 * This corresponds to all the changes decided at the meeting of
711 May 23 2002. Needless to say we are running late...