1 2004-06-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
2 * src/gdcmDocument.[h|cxx]:
3 - Clean up of the Transfer related predicates. They are now all based
4 on new method isGivenTransferSyntax, that (should) handle properly
6 - general clean up, simplification, and coding style.
7 - Specific clean up of Parse7FE0() (umproperly named actually).
8 * gdcmPython/testSuite.py: an odd temporary kludge introduced.
10 2004-06-14 Jean-Pierre Roux
12 - fix the display of Sequence Delimitor (SQDepthLevel pb)
13 - fix the display of SQItem ordinal number
14 - add the GetSQItemByOrdinalNumber method
15 - remove some useless never written private methods
17 2004-06-14 Jean-Pierre Roux
19 - adding a constructor taking a gdcmDocEntry as an input param
20 - ReplaceOrCreateByNumber now returns :
21 a gdcmBinEntry * if a Binary (void *) value is passed as a param
22 a gdcmValEntry * if a string value is passed as a param
24 - SetEntryByNumber now allows setting gdcmValEntry or gdcmBinEntry,
25 according to the param type (no longer sets a gdcmDocEntry)
26 - GetValEntryByNumber, GetBinEntryByNumber added
27 - NewValEntryByNumber and NewBinEntryByNumber added
29 - Pixel Data are now linked to the (7fe0,0010) elements, after reading
31 - GetSQItemNumber and SetSQItemNumber added, to provide
32 a (relative) Item identier inside a given Sequence
33 \warning : some pb remaining around this number
35 - AddEntry now takes the Item Number as a param
37 - adding a constructor taking a gdcmDocEntry as an input param
39 2004-06-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
40 * Memory leak hunt with the following command:
41 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
42 --show-reachable=yes gdcmTests PrintDocument
43 It looks like many (all?) leaks are due to the STL (or a bad usage
44 of the STL. The lines producing the leaks now have a comment with
45 a "MEMORY LEAK" tag: you can retrieve them with
46 grep "MEMORY LEAK" src/*
47 Here are two typical examples which I can't help fixing:
53 name = test; //// <--- valgrind detects 960 bytes lost in
54 //// call to std::string::operator=(char const*)
55 name.clear(); //// Doesn't help !
63 std::cout << "Type a bunch of characters followed by RETURN: ";
64 getline(std::cin, line); //// <--- valgrind dectects a loss
65 //// of 1320 bytes in call to
66 /// std::basic_istream<>& std::getline<>
72 2004-06-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
73 * src/gdcmHeader.[cxx|h]:
74 - Predicates on the Transfer syntax (of the form Is[JPEG|RLE]*)
75 and related, moved away to gdcmDocument.
76 - Accessors (on the form [Get|Set]Entry*) set up to expose publicly
77 the corresponding protected accessors of inherited class
78 gdcmDocument, removed ! As a consequence gdcmFile had to be
79 declared friend of class gdcmDocument (see below).
80 - operator< moved to gdcmDocument (in fact it belongs to gdcmDicomDir).
81 - Clean up of undefined or unused methods.
82 * src/gdcmFile.[cxx|h]: added SetEntryByNumber (in order to take into
83 account the changes to gdcmHeader.h).
85 - gdcmFile is now a friend class (in order to take into account the
86 changes to gdcmHeader.h).
87 - Predicates on the Transfer syntax (of the form Is[JPEG|RLE]*) added
88 (see changes to gdcmHeader.h).
89 - Accessors (reading on the form GetEntry*) are now public.
90 - Clean up of undefined or unused methods.
91 * src/gdcmDocument.cxx:
92 - adaptation to changes to gdcmDocument.h
93 - ::OpenFile now writes a verbose message when file cannot be opened.
94 - some std::string properly set to VRKey
95 * src/gdcmDicomDir.h: historical references to gdcmHeader changed to
96 references to gdcmDocument.
97 * Test/TestFindTags.cxx: changed accordingly to above changes.
98 * gdcmPython/testSuite.py: adapted to renaming of acr files in
99 cvs repository gdcmData.
101 2004-06-09 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
102 * src/gdcmValEntry.h: member voidArea type changed from char* to void*.
103 * src/gdcmBinEntry.h: member voidArea commented out, since it potentially
104 conflicts with gdcmValEntry::voidArea.
105 * src/gdcmValEntry.cxx: unmatching comment wiped out.
106 * src/gdcmVR.[h|cxx]: added two predicates that partition the possible
107 Value representation between StringRepresentable and BinaryRepresentable.
108 * src/gdcmDocument.cxx:
109 - method ParseDES: proper indentation restored and usage of
110 gdcmVR::IsVROfGdcmStringRepresentable wired in.
111 - method LoadDocEntry: the fingerprint left in the SetValue() of
112 unloaded entries (length > MaxSizeLoadEntry) had curiously been
113 removed. Reverting to previous code segment with the proper
114 dynamic_cast< gdcmValEntry* >.
115 Note: this was (partially) breaking the python test suite
116 (gdcmPython/testSuite.py) that made usage of the above
117 fingerprint to check presence of "Pixel Data".
118 * src/gdcmDocEntry.h: coding style.
119 * gdcmPython/__init__.py: environement variable GDCM_DATA_PATH is
120 now taken into account.
121 * gdcmPython/gdcm.i: adaptation to the new internal representation
122 of gdcm (exit gdcmParser, hello gdcmDocument).
123 * gdcmPython/testSuite.py: quick and dirty fix for loading vtkgdcmPython
125 * gdcmPython/demo/PrintHeader.py: doesn't use the gdcmDocument::Print()
126 anymore, but instead prints the loaded Python dictionary.
127 * .... alas, the python testSuite is still broken.
129 2004-05-18 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
130 * gdcmPython/gdcm.i : remove useless lines concerning the gdcmGlobal
132 * gdcmPython/setup.py : replace the use of cvar.gdcmGlob to gdcmGlobal
133 * src/gdcmUtil.h : export methods
135 2004-05-16 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
136 * Some more cleanup/enhancement in gdcmPython/CMakeLists.txt getting close
138 * Initial addition of automatic python testing
139 * Initial addition of automatic image comparison
141 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
142 * src/gdcmCommon.h, gdcmDicomDir.cxx, gdcmFile.cxx, gdcmHeaderHelper.h,
143 gdcmParser.cxx, gdcmParser.h : bug fix for the Microsoft .Net compilation
145 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
146 * src/gdcmFile.cxx, gdcmHeader.cxx : bug fix for the msvc compilation
147 * Test/ShowDicom.cxx : bug fix for msvc compilation
148 * vtk/vtkgdcmViewer.cxx : bug fix for msvc compilation
150 2004-05-04 Jean-Pierre Roux
151 * ADD Taking into account the 'Dicom Sequences' leads up to introduce
152 new concepts (and new classes) :
153 a 'gdcmDocument' is composed of a set of Doc Entries, that are
154 - elementary gdcmDocEntries (former gdcmHeaderEntries)
155 - Sequence Doc Entries (gdcmSeqEntries)
156 a Sequence is composed of Items.
157 Each item is a set of Doc Entries (this is recursive)
158 The non uniqueness of the 'Dicom tag' is due to this recursivity
159 (never taken into account)
160 Our unability to add a new 'entry' in the header
161 at the proper location (neither in the H-Table (map or multimap),
162 nor in the Chained List is also due to this recursivity.
163 Don't try, right now, to use/modify/compile these new sources :
165 We just commit all the stuff, 'as is', in order not to loose it.
167 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
168 * vtk/vtkGdcmReader.cxx : bug fix in the setting of file name
170 2004-05-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
171 * vtk/vtkGdcmReader.cxx : bug fix when loading a list of files using the
172 file prefix (SetFilePrefix)
174 2004-05-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
175 * Add a new test: ShowDicom, for now this is just the c++ version of
176 checkRead.sh, later it will be able to compare the image read against a
178 * Replace the DEBUG on the stack with a global entry in cmake interface:
179 GDCM_DEBUG, so you can turn verbosity ON/OFF for debug statement.
181 2004-04-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
182 * Add an example subdir, with a real example on how to read + write a
185 2004-04-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
186 * Doc/gdcmUML.xmi added raw UML class view (umbrello format)
187 * Doc/CMakeLists.txt: the main page is now properly differentiated
188 between the developper and user version.
189 * Doc/doxygen.config.in: dropped search related obsolete flags
190 * src/gdcmParser.h, gdcmHeader.h: doxygenation
192 2004-04-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
193 * DEVELOPPER: added some helpfull comments for compile/test/install
196 2004-04-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
197 * ENH: 1. Remove remp solution of gdcmTests.cxx+ gdcmMain directly in
198 src directory, now generated in the build dir.
199 2. Tests as mentionned smarter
201 4. Add a new method in gdcmDict that return the PubDict by name
202 this is interesting for 3rd party lib like ITK,
203 where we could set the institution name / patient name...
205 * ENH: 1. Now the test suite is working for real
206 2. All binaries are now output in the gdcm-bin directory
207 (this was not true before)
209 2004-04-28 Jean-Pierre Roux
210 * ENH add the provisional gdcmHeader::SQDepthLevel to allow
211 SeQuence indented printing of Dicom Header.
212 * ENH merge methods gdcmParser::Parse and gdcmParser::LoadHeaderEntries
213 into the single gdcmParser::LoadHeaderEntries for efficiency purpose.
214 Computation of SQDepthLevel is now part of gdcmHeader constructor
215 * ENH add self defined param 'new' to PrintHeader to 'show' the SeQuence
216 tree-like structure of a Dicom Header.
217 * FIX Test code cleaning
219 2004-04-25 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
220 * ENH: Adding automatic testing
221 1. Need a DartConfig.cmake to submit to public
222 2. Add a test driver gdcmTest.cxx
223 3. gdcmTestMain, an helper for the main test driver gdcmTest
224 4. Files in Test don't have a main anymore, this becomes interesting
225 when we add more and more tests, thus dsw don't have to load
227 * ENH: Adding a GDCM_DATA_ROOT for testing
228 * ENH: Remove redundancie about GDCM_DICT stuff, now we only need to modify
229 one file instead of seven + some small cleanup
231 2004-04-22 Jean-Pierre Roux
232 * ENH Minor changes to the Print() methods.
233 * ADD gdcmParser::PrintEntryNiceSQ() to allow SQ-indented
234 Header printing. Example given with :
235 > PrintHeader fileName 2 new
236 (SQ based tree-like structure still to be done for the Header ...)
238 2004-04-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
239 * ENH: Some cosmetic clean up for compilation with -W -Wall -Werror
240 1. I have added some unsigned where needed
241 2. Some function parameter not used -> (void)
242 3. In gdcmDicomDir.cxx, add GDCM_DICOMDIR_NONE case
243 4. g++ don't like character '\' in comment
244 5. #define jpeg_create_decompress jCreaDecompress
245 this really need to be fixed
246 6. virtualize destructor of gdcmObject ... leakage
247 7. sscanf(g->first.c_str(),"%x",&gr_bid);
248 this also really need to be fixed
249 8. gdcm/src/jpeg/libijg8/CMakeLists.txt,
250 remove compression file
251 (as we only do decompression, right ?)
252 * ENH: Change malloc/calloc/free with c++ equivalent
254 2004-04-21 Jean-Pierre Roux
255 * FIX gdcmHeaderHelper::GetXSpacing
256 when a single value is found (bug ?), xpacing is now
257 defaulted to yspacing
259 2004-04-19 Jean-Pierre Roux
260 * ADD gdcmData/Wrist.pap (PAPYRUS 3.0 -single frame-) for checking purpose
261 * ENH add parameters :
262 bool exception_on_error = false,
263 bool enable_sequences = false,
264 bool ignore_shadow = false
265 to the gdcmFile constructors to be full gdcmParser compliant
266 * FIX vtk/vtkGdcmReader.cxx now uses enable_sequences = true in gdcmFile
267 to allow reading of PAPYRUS 3.0 files
269 2004-04-06 Jean-Pierre Roux
270 * ADD gdcmData/E00001S03I0015.dcm for SQ checking purpose
272 2004-04-02 Jean-Pierre Roux
273 * ADD : Test/checksequence.sh, for a general recap on SQ pb
274 * FIX : gdcmParser::WriteEntryTagVRLength emprovement of special treatement
275 for Philips spurious Tag fffe|0000 while rewritting Dicom files
277 2004-03-30 Jean-Pierre Roux
278 * FIX gdcmParser::ReplaceOrCreateByNumber shouldn't seg fault any more
279 for ACR file, written out as DICOM files (hope so...)
281 2004-03-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
282 * src/gdcmParser.[cxx|h] and gdcmHeader.[cxx.h]: gdcmHeader::Write split
283 in WriteEntryTagVRLength and WriteEntryValue. Those methods were
284 moved to base class gdcmParser and only the specialisation is kept
286 * src/gdcmParser.[cxx|h]: ReplaceOrCreateByNumber(char*, guint16, guint16)
287 trashed out (because ReplaceOrCreateByNumber(string, guint16, guint16)
288 already does the job.
289 * src/gdcmDicomDir.[cxx|h]: WriteDicomDirEntries renamed to WriteEntries
290 (to be consistent with gdcmParser::WriteEntries).
292 2004-03-30 Benoit Regrain
293 * vtk/vtkGdcmReader.[h|cxx] : fix the read of 3 gdcmHeader when making an
294 upate of the object's instance. It's passed to 2 in the unfavorable
295 case : one in the ExecuteInformation, one in the ExecuteData
297 2004-03-29 Jean-Pierre Roux
298 * ENH : Check on file type to be written moved
299 from gdcmParser::WriteEntry to gdcmParser::WriteEntries
300 * FIX : gdcmObject::ResetBoundaries now stops properly
301 when end-of-list is reached
302 : gdcmVersion modified (as Benoit Regrain asked)
304 2004-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
305 * src/gdcmParser.cxx: removal of all TAB character. Indentation fixed.
306 * src/gdcmUtil.cxx: added forgotten iostream include.
307 * src/gdcmCommon.h: FileType enum entry DICOMDIR removed (since
308 equivalent to ExplicitVR in existing code).
310 2004-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
311 * src/gdcmUtil.[cxx|h] split in two. Additional file gdcmGlobal.[cxx|h]
312 now contains all the gdcmGlobal related code.
313 * minor coding style and doxygenation changes.
315 2004-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
316 * src/gdcmUtil.[cxx|h] split in two. Additional file gdcmDebug.[cxx|h]
317 now contains all the Debug related code.
318 * minor clean-up of includes in src/*.cxx
319 * src/gdcmUtil.[cxx|h] _cleanString C style function (replaced with
320 CreateCleanString) removed.
321 * src/gdcmUtil.[cxx|h] _CreateCleanString renamed to CreateCleanString
322 * Doc/DoxyMainPageUser.txt added.
323 * Doc/Doc/DoxyfileUsers updated to version 1.3.4 of Doxygen.
324 * src/gdcmCommon.h now defines getcwd for Win32 (moved away from
327 2004-03-24 Jean-Pierre Roux
328 * FIX a lot of little surface modifications to be doxygen 1.3.6 compliant
330 2004-03-23 Jean-Pierre Roux
331 * FIX Now gdcmFile::SwapZone doesn't seg faults any longer for
332 big endian made volumes
333 * ENH Now gdcmParser constructor and destructor are protected to forbid
334 end user to instanciate class gdcmParser
335 (only gdcmHeader and gdcmDicomDir are meaningfull)
337 2004-03-22 Benoit Regrain
338 * FIX : src/gdcmDicomDir.cxx : make windows compilable
339 * FIX : gdcmPython/gdcm.i : change gdcmStudy to gdcmDicomDirStudy and
340 gdcmSerie to gdcmDicomDirSerie
342 2004-03-19 Jean-Pierre Roux
343 * ENH Now the tree-like structure describing a DICOMDIR comming from
344 an already existing DICOMDIR file is consistent with
345 the home-made tree-like structure build ex-nihilo
346 or build from the files held (recursively) in a Directory
347 functions gdcmDicomDir::CheckBoundaries()
348 gdcmObject::SetBoundaries() added
350 2004-03-17 Jean-Pierre Roux
351 * REM (Eric Boix bug) : removal of meaningless
352 gdcmDicomDirImage::NewImage function.
353 * FIX now file names and directory name are written properly in the
355 * FIX now gdcmDicomDir constructor may be call without any trick
358 2004-03-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
359 * FIX (JPR bug) : src/gdcmDicomDirImage.cxx added missing definition
360 of gdcmDicomDirImage::NewImage as empty function.
362 2004-02-28 Jean-Pierre Roux
363 * ENH add gdcmDicomDir:NewPatient
364 add gdcmDicomDirPatient:NewStudy
365 add gdcmDicomDirStudy:NewSerie
366 add gdcmDicomDirSerie:NewImage
367 to allow making gdcDicomDir object.
368 * ADD PrintDicomDir executable that uses gdcmDicomDir tree-like structure
369 (as opposite to the gdcmHeader chained list)
371 2004-02-11 Benoit Regrain
372 * FIX : memory leaks and the set of ArgDelete methods in gdcmDicomDir
373 when using from python
375 2004-02-10 Benoit Regrain
376 * FIX : bug fix in the gdcmDirList for the recursivity in directories
377 * FIX : in gdcmDicomDir when the directory is empty
378 * ENH : add callback and methods to get the progression of dicomDir
381 2004-02-06 Jean-Pierre Roux
382 * ENH : - now gdcmDicomDir::CreateDicomDir() returns also the meta elements
383 - GDCM_META added to gdcmDicomDirType
384 - class gdcmMeta created
385 * ENH : - A brief summary is now displayed at the beginning of
386 'testDicomDir' to help disaster magnitude estimation
387 * REM : Now useless Test/explDICOMDIR.cxx
389 2004-02-05 Benoit Regrain
390 * ENH : add methods in gdcmObject to get the hash table or the list of
392 * FIX : wrapping python for ListPatient, ListStudy, ListSerie, ListImage
393 * FIX : wrapping python for TagHeaderEntryHT
395 2004-02-04 Benoit Regrain
396 * FIX : even length for some strings when writting the dicom dir
397 * FIX : sort the images in the dicom dir
398 * FIX : Bug fix for python use of dicom dir
399 * ADD : a python demo
401 2004-02-04 Jean-Pierre Roux
402 * FIX : Final solution (?) for icone embedded images
403 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
404 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
405 add groups 6002, 6004, 6006, to allow 'clean' parsing of
406 gdcmData/gdcm-MR-SIEMENS-16.acr1
407 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
408 to make full checking easier
410 2004-02-04 Benoit Regrain
411 * FIX : WriteEntries : coding style & logic in parameters
412 * FIX : Set the elements to create the DicomDir in a dictionary file
414 2004-02-03 Benoit Regrain
415 * gdcmDirList : to parse a hard drive directory in recursive (or not)
416 * gdcmDicomDir : add the load of directory
417 * Bug fix and print add-on
419 2004-02-03 Jean-Pierre Roux
420 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
421 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
422 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
423 * FIX gdcmParser.cxx : 'group length' elements are now considered
424 as integers, even for shadow groups, when file is Implicit VR
426 2004-02-02 Jean-Pierre Roux
427 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
429 of the last synonym :-(
430 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
432 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
433 * FIX taking into account the possible 7fe0,0010 multiplicity
434 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
435 to allow removal of references to 7fe0,0010, to deal with
436 ACR-NEMA images, when 0028,0200 is meaningfull
438 2004-01-31 Jean-Pierre Roux
439 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
440 no longer writes 'Un' on disk
441 * FIX SQ elements with actual length are now dealt with corectly
442 * FIX gdcmFile::WriteBase make the difference, for color images, between
443 the length (for Palette expanded images)
444 and Raw Length (non expanded image + Palette)
445 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
446 (that broke Write). Replaced by UL.
447 Aware user will reload the field if he
448 thinks it's necesssary
450 2004-01-30 Jean-Pierre Roux
451 * gdcmParser::CheckSwap() now defaults the filetype to ACR
452 when 'dirty Acr' is found, to be compliant with the new
453 IsReadable() methods.
455 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
456 (no DOUBLE images in kosher DICOM,
457 but so usefull for people that miss them ;-)
459 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
460 DICOMDIR related utilities (not checked as Windoze compliant)
462 2004-01-28 Jean-Pierre Roux
463 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
465 2004-01-27 Jean-Pierre Roux
466 * gdcmParser constructor has a new boolean param,'ignore_shadow',
467 to allow skipping the shadow elements, to save memory space.
468 The TRUE value for this param has to be used
469 with a FALSE value for the 'enable_sequence' param.
470 ('public elements' may be embedded in 'shadow Sequences')
471 * gdcmHeader methods now deal with 'embedded icones images' in the header
472 (even when an 'icone image sequence' is announced by the
473 element (0x0088,0x0200), but there is NO icone at all ...
475 * gdcmHeader sometimes Image Location value doesn't follow
476 the supposed processor endianity (see gdcmData/cr172241.dcm).
479 * gdcmHeader add the method
480 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
481 to get *all* the Header Entries with the same tag.
482 GetHeaderEntrySameName is probabely *useless*
483 (no meaning : Name is *not* an identifier within the Dictionnary)
485 2004-01-26 Benoit Regrain
486 * Bug fix in the print of hexadecimal representations. Remove long fields
487 in the print and add a third level of print to print them
489 2004-01-23 Benoit Regrain
490 * Bug fix on field having a VR = 'UI'. Assume that is a string field
491 * Bug fix on test suite after remove the strip made on not string fields
492 * Split the IsReadable method between gdcmParser which test that the file
493 is dicom and gdcmHeader which test that it's an image file
495 2004-01-22 Benoit Regrain
496 * DicomDir : clean code, add methods, set variables in protected or private
497 * gdcmUtil : bug fix for the clean string method
499 2004-01-19 Benoit Regrain
500 * Add the use of shadow dictionaries
501 * bug fix and coding style
503 2004-01-19 Benoit Regrain
504 * src/gdcmFile.cxx : bug fix concerning the close of file
505 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
506 * Add the update of header entries using the shadow library
508 2004-01-19 Benoit Regrain
509 * removal of file gdcmHeader2.cxx
510 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
511 inheriting from gdcmParser. This split is to prepare the integration
513 * bug fix under python
515 2004-01-16 Jean-Pierre Roux
516 * REM removal of class gdcmHeaderEntrySet
517 * REM removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
518 * ADD add file gdcmHeader2.cxx
519 * ADD add method gdcmHeader::SetPrintLevel (for PrintHeader)
521 2004-01-15 Benoit Regrain
522 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
523 entries created while parsing the header. Thus, they will be destroyed
524 when the gdcmDictSet will be destroyed
525 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
528 2004-01-15 Benoit Regrain
529 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
530 made a fatal error because of the memory release at the end of program.
531 The problem was in vtkGdcmReader::ExecuteData where we were allocate
532 some memory and vtk seems to have some problems with that.
533 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
535 2004-01-14 Benoit Regrain
536 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
537 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
538 * src/*.[h|cxx] : make changes due to class name changes
539 * gdcmPython/demo/*.py : bug fix due to method names
541 2004-01-13 Benoit Regrain
542 * src/*.[h|cxx] : coding style
543 * vtk/*.[h|cxx] : coding style
545 2004-01-13 Benoit Regrain
546 * gdcmPython/testSuite.py : test the readable flag of file for tests
547 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
548 It's lied to the stl compilation by MSVC (windows, always windows...)
549 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
551 2004-01-12 Benoit Regrain
552 * src/*.h : add comments
553 * src/gdcmDictSet.h : set the method BuildDictPath in public
554 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
555 directly setted in the source code
556 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
559 2004-01-09 Benoit Regrain
560 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
561 * setup.py : use a reference to gdcmVERSION
563 2004-01-07 Benoit Regrain
564 * Modification to compile with the distutils.
567 2003-12-10 Benoit Regrain
568 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
569 can use a gdcmHeaderHelper to load datas
570 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
571 made in the source code
573 2003-12-10 Benoit Regrain
574 * Update Windows projects and .cvsignore files
576 2003-11-12 Jean-Pierre Roux
577 * ENH gdcmHeader constructor has one more parameter (default value : false)
578 that allows the user to 'go inside' the SeQuences only
580 gdcmElValSet:Print takes it into account
582 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
583 * ENH: Update gdcmPython/CMakeLists
584 * FIX: (gdcmHeaderHelper) GetRescale and GetSlope
585 * FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
587 2003-11-10 Jean-Pierre Roux
588 * FIX : gdcmHeader::LoadElements is now based
589 on the ListTag listElem member,
590 not longer on the TagElValueHT tagHt member
591 * ENH : PrintPubElVal shows (temporarily) both results,
592 with the tagHt member and the listElem member.
593 (it's easier to 'see' the problems when using Printheader)
595 * FIX : old private member LgrElem is now splitted into
596 ReadLength : Length actually found on disk (updated only
597 if bug fixing is necessary), for internal
599 UsableLength : Updated by FixFoundLength, to fix a bug
600 or to allow Parser going on.
601 Will allow to re-write a kosher header when a SeQuence
602 with a length (not 0000) is found
603 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
604 because gdcmElValSet::Add does not update ListElem
607 2003-11-07 Jean-Pierre Roux
608 * FIX misstyping in Transfert Syntax name table
609 * ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
610 when they have an actual length (not 0000 nor FFFFF)
611 (Nobody should care of it, but DICOMDIR explorers)
613 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
614 * ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
616 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
617 * ENH: vtkGdcmReader now supports LUT !
618 (vtkgdcmViewer for now is not able to use them though)
620 2003-11-05 Jean-Pierre Roux
621 * in testSuite.py : new files names for checking the package
622 * FIX : Forgot to commit gdcmFile::GetImageDataSizeRaw();
623 that returns the pixel area size to the *aware* (vtk) user
624 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
626 2003-11-05 Benoit Regrain
627 * in testSuite.py : Modify the rules for checking the paths
628 : Explicit error messages
629 * in __init__.py : Related modif
631 2003-11-03 Jean-Pierre Roux
632 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
633 to be used by aware (vtk) users that want to manage
634 LUT (and no to turn the PALETTE image into an RGB pixels one)
635 * GetPixelType now returns 8U for 24 Bits images
636 (vtkGdcmReader compliant)
638 2003-10-31 Jean-Pierre Roux
639 * Removal of *all* gdcmData images and add them again
640 in order to loose the 'history' of un-anonymised images
642 2003-10-31 Jean-Pierre Roux
643 * RMV : removal of useless jBitsInJsample.h
644 for both 8 and 12 Bits JPEG Lossy Libraries
646 2003-10-31 Jean-Pierre Roux
647 * ENH : Add the functions gdcmFile::GetImageDataRaw
648 gdcmFile::GetImageDataIntoVectorRaw
649 that act as GetImageData and GetImageDataIntoVector
650 except the making of an RGB Plane from Gray Plane + LUT
651 Intended to aware (vtk) users who know how to manage
654 GetLUTRGBA return a R,G,B,A LUT if any
655 lgrTotaleRaw gives the 'Raw' length
656 GetImageDataRaw returns the gray Plane
657 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
658 (They stay Grey, just like with other Dicom viewers :-(
660 2003-10-30 Jean-Pierre Roux
661 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
663 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
664 * ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
665 being coherents dicom files.
667 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
668 * FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
670 * ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
671 * ENH: Two steps is necessary to please VC++ compiler...
672 * FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
673 * ENH: Add include dir to medcon lib
674 * FIX: only one function is being exported for now !
675 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
677 2003-10-29 Jean-Pierre Roux
678 * adding gdcmHeader::GetLUTRGBA
679 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
680 --> Mathieu, the modif u're waiting for is not yet committed
681 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
683 2003-10-27 Jean-Pierre Roux
684 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
685 00191113.dcm DermaColorLossLess.dcm
686 MxTwinLossLess.dcm RadBWLossLess.dcm
687 * ENH: For version prior to vtkImageViewer2 -r 1.19
688 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
690 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
691 * Removal of ido stuff in CMakeLists.txt
693 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
694 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
695 * FIX: remove a call to ->Modified ... see comments
696 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooow !
698 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
699 * FIX: Problem with path for libvtkgdcmPython
700 * ENH: Try adding a search script for python site-package
701 * RMV: Remove some file from medcon lib that are not necessary
702 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
703 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
704 * FIX: More pragma disable fro VC++,
705 I don't think I break something as it is also disable in VTK/ITK.
706 But it fasten debug compilation time.
708 2003-10-23 Jean-Pierre Roux
709 * gdcm now deals with 16 Bits Run Length Encoded images
710 (they are compressed as 2 planes images,
711 one for the high Bytes, the other for low Bytes)
713 2003-10-22 Jean-Pierre Roux
714 * Now CheckRead takes into account :
715 - the bugged 'Leonardo' Siemens images
716 - the XA images, sent thru the burning VPRO station
717 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
720 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
721 * FIX: When copying a Makefile.am to CMakeLists.txt
722 one should remove the '\'
724 2003-10-22 Jean-Pierre Roux
725 * in gdcmData adding a bugged 'Leonardo' Siemens image
726 (wrong lengths in header)
727 OK with gdcm, KO with the other viewers :-)
728 * add a GE dlx XA image, thru the VEPRO burning station
731 2003-10-21 Jean-Pierre Roux
732 * in gdcmData add the checkvtkgdcmViewer.sh shell script
733 for a brutal checking of vtkgdcmViewer compliance
735 2003-10-21 Jean-Pierre Roux
736 * add the files for 'xmedcon' Jpeg Lossless library
737 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
739 2003-10-21 Jean-Pierre Roux
740 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
742 2003-10-21 Jean-Pierre Roux
743 * garbage Siemens 'Leonardo' images dealt with
744 (the patch is easy to remove)
745 * cosmetic changes to avoid warnings
747 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
748 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
749 no need to press 'r' now.
751 2003-10-20 Jean-Pierre Roux
752 * upgrade of checkRead.sh checkWrite.sh according
753 to new Jpeg Lossless decompressor
754 * add US.3405.1.dcm, a genuine RGB medical file ...
755 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
756 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
758 2003-10-15 Jean-Pierre Roux
759 * general anonymisation in gdcmData
760 * adding the 'color files' from
761 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
762 * adding some well knowed bugged-header images
763 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
764 waiting for their inclusion in Python testsuite
766 2003-10-15 Jean-Pierre Roux
767 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
768 no longer seg faults when file is not found
770 2003-10-14 Jean-Pierre Roux
771 * Emprovement of reading for Dicom encapsulated Jpeg LossLess
774 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
775 * TODO: *.in file to genereate a UseGDCM later
777 2003-10-14 Jean-Pierre Roux
778 * Some supposed-to-be Dicom Images have no preamble.
779 OpenFile takes it into account
780 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
781 * Missing elements added in dicomV3.dic
782 (just to be affraid : have a look at
783 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
784 and do it again next year ;->
786 2003-10-13 Jean-Pierre Roux
787 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
788 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
789 But there are NOT. It's fixed !
791 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
792 * FIX: "jpeglib.h" was not found on VC++
793 * FIX: vtkgdcm was not being installed
795 2003-10-10 Jean-Pierre Roux
796 * ENH : OpenFile closes the file if it *really* doesn't look like
797 an ACR-NEMA / DICOM one.
798 * FIX : testWrite no longer writes an empty file if the source file
800 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
803 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
804 * FIX: CMake generate now documentation
805 * ENH: out of source doc build !
806 * ENH: Generate both user and dev documentation
807 * ENH: Should work on windows too
808 * ENH: Only one doxygen config.in file is needed
809 * FIX: make install should be ok now on ùnix plateform
810 * FIX: PATH to dictionary was wrong (missing /)
811 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
813 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
814 * vtkGdcmReader is now able to read rgb dicom file.
815 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
816 * added a gdcmViewer to vtk test, use mouse to control
817 window level & window width
819 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
820 * CMake-ification of gdcm, we have now two build system
821 * FIX: on cygwin Wsock32 doesn't exist
822 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
824 2003-10-06 Emanuel Ollart
825 * FIX : compilation process wad broken.
826 Changed gdcmViewer_sources to vtkgdcmViewer_sources
828 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
829 * change gdcmViewer -> vtkgdcmViewer
830 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
832 2003-10-06 Jean-Pierre Roux
833 * FIX :A few nasty patches to allow the reading of a lot of nasty images
834 ( e.g : well known GE images with a wrong elem length,
835 : Philips MRI Images with a wrong Huffman table)
836 * still to be done : allow the reading of bugged LEONARDO Siemens images
838 2003-10-03 Jean-Pierre Roux
839 * Odd length strings are padded with '\0' (not with spaces,
840 to remain compliant with already defined strings,
841 like Transfert Syntax UID and others)
843 2003-10-03 Jean-Pierre Roux
844 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
845 to allow displaying RGB images (not only by affim ;-)
847 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
848 * vtkGdcmReader is now able to read rgb dicom file.
849 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
851 2003-10-03 Jean-Pierre Roux
852 * A few nasty patches to allow the reading of a lot of nasty images
853 ( e.g : well known GE images with a wrong elem length,
854 : Philips MRI Images with a wrong Huffman table)
855 * still to be done : allow the reading of bugged LEONARDO Siemens images
857 2003-10-03 Jean-Pierre Roux
858 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
860 2003-10-03 Jean-Pierre Roux
861 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
862 to allow displaying RGB images (not only by affim ;-)
864 2003-10-03 Jean-Pierre Roux
865 * gdcmFile::GetImageDataIntoVector now
866 - deals with MultiFrames MultiFragments Run Length Encoded files
867 - deals with YcBcR (YBR_FULL) files
868 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
869 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT,
873 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
874 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
875 Two reasons: - clear things
876 - third parties acces gdcm through header files, so won't
877 suffer anymore VC++ complains
879 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
880 * add argv[1] in testvtkGdcmReader.cxx
883 2003-09-24 Jean-Pierre Roux
884 * The lines are now eigthy characters long.for
885 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
887 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
888 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
889 char* to std::string. Thus, the use of strdup becomes useless. (see
890 previous commis of Malaterre)
891 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
892 before the last Malaterre's commit.
894 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
895 * This commit should fix the Debug building under VC++, the problem
896 was mainly a mixture of debug and release lib being loaded at startup.
897 * I also remove a depency to a specific C function: strdup. Because I had
898 to force the link to msvcrtd (whereas strdup is in libc).
900 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
901 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
902 located in the gdcmCommon.h file. All use of reference of tha has been
903 changed to now use the variable GDCM_UNFOUND.
905 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
907 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
908 Dicom dictionary. The test suite can now be run again. Note:
909 I'm note very happy with the " (RET)" changes. I believe this
910 RETAINED comment should be dropped when parsing the dictionary.
913 - AUTHORS updated and now in alphabetical order
914 * Makefile.am now exports gdcm.dsw for Windoze users.
916 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
917 * cygwin complains about missing std:: in subdir Test/
919 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
920 * remove some methods that are now in gdcmHeaderHelper
922 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
923 * vtkGdcmReader set spacing and origin correctly
925 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
926 * Fix a few delete/delete[] mismatch
928 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
929 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
930 interpretation to data given by gdcmHeader. For instance there are
931 heuristics to get informations (look at different places).
932 * it also include a specific class: gdcmSerieHeaderHelper devoted to
933 sorting DICOM images based on different strategies.
934 * modified Makefiles accordingly.
936 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
937 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
938 when building in debug mode
939 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
940 src/win32/gdcmdll.dsp
941 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
943 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
944 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks
947 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
948 * src/win32/libgdcmjpeg12.dsp was not dos format
949 * src/win32/libgdcmjpeg12.dsp :
950 libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
951 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
953 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
954 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
956 * src/gdcmFile.cxx : bug fix in affectation type
957 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
958 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
959 * Modifs of MVSC projects to compile them. Not concerning 2 identic
960 symbols... future problem ?
962 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
963 * src/win32/libgdcmijpeg12.dsp was missing
964 * modified gdcm.dsw accordingly
966 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
967 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
969 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
970 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
971 commit of JPR (before his hollidays to facilitate our work).
972 * setup.py : bug fix in code. Modifications made while the last commit
973 of JPR. The code hasn't been tested before the commit... it's so
974 useless to make that (for best programmer that is JPR) !!!
976 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
977 * tagged the current version as Version0_3 (i.e. version 0.3)
979 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
980 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
981 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
982 * *.dsp : modifications to use new libgdcmijpeg8 library
983 * setup.py : bug fix on VTKPATH variable
984 * PACKAGER : adding all concerning windows
986 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
987 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
989 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
990 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
991 test suite reported error.
992 * PACKAGER file added (describes what a packager must do when
993 packaging a new release).
994 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
995 * configure.in: upgraded version number to 0.3.0
996 * fixing build of rpm (through rpm -ta):
997 - Doc/Makefile.am exports proper doxygen files
998 - src/jpeg/libijg8/Makefile.am exports the include files.
1000 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1001 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
1002 * src/gdcmHeader.h : formatting code
1004 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1005 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
1006 We were obtaining error message from vtk. Now, creation of file list
1007 is made in an internal list to prevent this problem.
1008 Bug fix when output is empty.
1009 Bug fix in update of progress value. Previous commit for this was a bad
1011 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
1013 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1014 * src/gdcmHeader.h : added method to get the file name
1015 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
1016 files. Added method to remove all files on the input
1017 Added FIXME comment concerning the bad parsing of header made by
1018 ExecuteInformation method (in ExecuteData method)
1020 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1021 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
1022 when using make instal.
1023 * src/gdcmFile.cxx : bug fix under Window after JPR commit
1024 RQ : the JPR doesn't appear in the ChangeLog... normal for him
1026 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1027 * setup.py : adding include dir of jpeg lib to compile all sources
1028 * */Win32/*.dsp : JPR fix for windows compilation
1030 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1031 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
1033 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
1034 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
1036 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1037 * setup.py is again effective on un*x (takes into account the
1038 addon of the jpeg library)
1039 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
1040 * Doc/Doxy* updated (includes above enhancements)
1041 * INSTALL now points to web documentation
1043 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1044 * src/gdcmHeader.h doesn't make unnecessary reference to
1046 * gdcmPython/Makefile.am now avoids calling the wrappers for the
1048 * src/gdcm*.[cxx|h] :
1049 - to allow compilation with gcc 3.x
1050 -- clean up of STL usage (added explicit usage of std::)
1051 -- small fixes on exceptions.
1052 Note: linking not tested !
1053 - clean of doxygen comments to avoid warnings at documentation
1055 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
1056 dependent convertion).
1058 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1059 * Clean up of previous JPR garbage commit (not even commented in the
1061 - Test/Makefile.am removed the reference to unexisting testTS.cxx
1062 - moved all jpeg related files from src to src/jpeg/libijg8, with
1063 addition/modification of Makefile.am and configure.in.
1064 - the testSuite is still brain damage (not guilty).
1066 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1067 * WrapVTK.py : modifications to get correctly vtk source files to
1069 * vtk/vtkGdcmReader.cxx : modification for an already existing name
1070 (FileName -> Filename)
1072 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1073 * vtk/vtkGdcmReader.[cxx/h]:
1074 - UpdateProgress method should now be effective
1075 - removed the limitation on having only images loaded (as opposed
1077 - when building a stack of images/volume, a lesser number of
1078 gdcmHeader and gdcmFile instances should be used (hopefully
1079 accelerating things).
1080 - when building a stack of images/volumes, files which are not
1081 loadable (wrong path-filename, wrong permissions on existing file,
1082 or file not parsable by gdcm) are replaced with a black image
1083 in the stack (for the caller to notice the problem).
1085 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1086 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
1088 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1089 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
1090 between standard library (std) and vtk library (problems are found
1091 under Windows... thanks Windows !)
1093 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1094 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
1096 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
1098 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1099 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
1101 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1102 * When compiling with distutils (see setup.py) the C++ compiler is
1103 called with different flags than the default ones (with automake).
1104 In order to fix all those warning, I compiled gdcm with the command
1105 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
1106 and went for warning fixes:
1107 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
1108 up from unused variables.
1109 - vtk/vtkGdcmReader.cxx: potential bug fix.
1110 * src/gdcmHeader.h: Doxygen warning cleanup
1112 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1113 * gdcmPython/gdcm.i:
1114 - typemaps correction to take into account the systematic replacement
1115 of "using namespace std" with std:: prefix e.g. std::list,
1116 std::string... (cf changes of 2003-05-21).
1117 - gdcmGlob global variable of type gdcmGlobal (defined in
1118 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
1119 exported to Python a as cvar.
1120 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
1121 and GetPubDictTagNamesByCategory() as a replacement for deprecated
1122 gdcmDictSet.GetPubDictTagNames() and
1123 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
1124 C++ static methods).
1125 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
1126 with the above changes.
1128 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1129 * setup.py, manifest.in : bug fix under linux
1131 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1132 * Modification of setup.py to compile vtk part too. Then, we have 2
1133 wrappers which must work with same distutils. For that, we have a
1134 generic distutils in distusiltsWrapping.py ; with :
1135 - build_extWrap class to wrap generically all extensions,
1136 - ExtensionWrap base class for all wrapping extension that contains
1138 - Wrapper interface which wrap sources
1139 + In WrapSwig.py we have extension and wrapper for Swig
1140 + In WrapVTK.py we have extension and wrapper for VTK
1141 * MANIFEST.in : modifications to consider vtk directory and new python
1142 files for compilation
1144 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
1145 * Added python wrappers of vtkGdcmReader vtk class (see the
1146 source in vtk/vtkGdcmReader.cxx) :
1147 - vtk/Makefile.am now builds a library
1148 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
1149 python library (as opposed to _gdcm.so wich are the python
1150 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
1151 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
1153 - configure.in has an additional flag --enable-vtk that needs
1154 to be set to enable compilation of vtk related code, that is:
1155 + vtk/vtkGdcmReader.so and
1156 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
1157 + gdcmPython/vtkgdcmPython.so (see above)
1158 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
1159 be read when compressed or when HighBit + 1 != BitsStored),
1160 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
1161 the usage of the python wrapper of vtkGdcmReader vtk class.
1162 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
1163 * src/*.[h] all occurences of stl classes are now prefixed with
1164 std::, and all occurences of "using namespace std;" where removed.
1165 This is to avoid pollution of global namespace in included files.
1166 Apparently vtk does not avoid this pitfall: when using both
1167 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
1168 collision of various stl members (principally cout...).
1169 * gdcmPython/testSuite.py now cleanly removes temprory generated
1171 * gdcmPython/gdcm.i now declares a typemap for std::string (to
1172 comply with above changes)
1174 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1175 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
1176 * vtk/vtkGdcmReader.cxx now properly inports the image in the
1177 vtk data structure (an image Flip was required).
1178 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
1179 * cosmetic changes in documentation.
1181 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1182 * src/gdcmHeader.cxx: the constructor no longer exits when an
1183 unexisting file is given as argument.
1184 * The subdirectory Data (containing all the images used for the
1185 test suite) is not part of this repository anymore. A new module
1186 containing those images is now available at
1187 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
1188 with the name gdcmData.
1189 All the python scripts (including the package initialisation file
1190 gdcmPython/__init__.py) were adapated to take this change into
1191 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
1193 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1194 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
1195 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
1196 demo of the usage of this class.
1197 Compilation of this vtk part is only done when using the --enable-vtk
1198 at configure (or autogen.sh) stage.
1200 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1201 * More memory link related corrections and documentation fixes.
1203 - maximum info is obtained with a command of the form:
1204 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
1205 --show-reachable=yes PrintHeader
1206 - the remaining reachable blocks seem to come from the STL
1207 allocation scheme through the usage of map and list. It looks
1208 like this memory cannot be freed but it is not a memory leak
1209 (in fact further invocation to the STL would recollect the
1210 unused memory allthough it cannot explicitely be freed).
1211 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
1212 of displaying an image parsed with gdcm and displayed with VTK.
1213 Note: some images don't seem to work e.g.
1214 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
1215 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
1216 Allthough this weakens the semantics, it is a ditch attempt to
1217 make gdcm more thread friendly.
1219 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1220 * Memory link hunt (by using valgrind through the command
1221 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
1222 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
1223 gdcmHeader::_dicom_vr.
1224 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
1225 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
1227 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
1229 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1230 * src/Makefile.am now exports all the necessary include files at
1234 * UpdateGroupLength replaced by new one
1237 * UpdateGroupLength re-written using H-Table
1238 (named UpdateGroupLengthNew untill checks are over)
1240 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1241 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
1242 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
1244 - gdcmHeader::GetPubElValSet removed.
1245 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
1246 UpdateGroupLength, WriteElements, Write.
1247 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
1248 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
1249 carried the same semantics.
1250 - src/gdcmHeaderIdo.cxx changed accordingly.
1251 - gdcmFile::WriteBase now regroups all the codes from previous
1252 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
1253 - enum FileType moved to gdcmCommon.h
1254 * src/gdcmHeader.cxx AddDefault trashed
1255 * gdcmGetXSize added
1256 * getimageDataSize now calls gdcmGetXSize
1257 * Test/*.cxx changed to agree with above changes
1259 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1260 * src/gdcmHeader.h: LoadElements() is not a public method anymore
1261 (to avoid double call by end user).
1262 * Test/*.cxx LoadElements() doesn't need to be called explicitely
1263 by end user, since gdcmHeader::gdcmHeader now handles it.
1265 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1266 * gdcm/Doc many doxygen changes:
1267 - Doxyfile now has two different versions, DoxyfileUsers that generates
1268 the html.users end users oriented documentation and
1269 DoxyfileDeveloppers that generates the html.developper developper
1270 oriented documentation.
1271 - README changed accordingly
1272 - requirement.txt removed (old design info moved to TODO).
1273 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
1274 DoxyMainPage.txt, DoxyPython.txt provide more information.
1275 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
1276 be updated by simply regenerating the docs with doxygen and copying
1277 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
1278 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
1279 all the tests in the form "if (<map>.count() >1)" were removed.
1280 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
1281 ill-formed documentation sections.
1282 * src/gdcmHeader.cxx: ditto
1284 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1285 * setup.py fixed for un*x (needed macro for stdint.h)
1286 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
1287 un*ces with sh-utils test utility.
1288 * gdcmPython/demo/test.py renamed to PrintHeader.py
1289 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
1290 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
1291 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
1292 * src/gdcm*.cxx JPR's bad inclusion fixed.
1294 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1295 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
1296 * gdcmPython/demo/test.py changed accordingly.
1298 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1299 * gdcmPython/Makefile.am fixed linking against libstdc++
1300 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
1301 * Swig subdir (historical tests of swig version 1.3.17++) removed
1302 * Test/testChangeEntete.cxx some lines commented out in order to make
1304 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
1305 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
1307 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1308 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
1309 hence the user doesn't need this explicit call.
1310 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
1311 i.e. LoadElements() call removed.
1312 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
1313 - src/Makefile.am declares the proper flag for g++.
1314 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
1315 for adding user defined new tags.
1316 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
1317 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
1318 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
1320 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
1321 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
1322 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
1323 src/Makefile.am : the project should properly compile and install
1324 with the autotools, included the python wrappers part.
1325 * gdcm.spec.in : added a spec file for RPM packaging.
1327 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1328 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
1330 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1331 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
1332 to exported to the environement (see gdcmPython/testSuite.py
1334 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
1335 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
1336 ElValue class renamed to gdcmElValue for obvious consistency reasons.
1337 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
1338 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
1340 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1341 * gdcmPython/__init__.py doesn't crash anymore when running in
1342 in InstallMode or PreInstallMode but with an environement given
1343 value of GDCM_DICT_PATH.
1344 * src/gdcmDictSet.[cxx/h] coding style.
1346 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1347 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
1348 * src/gdcm.h general comments moved to TODO, and README
1349 * src/gdcm.h should now be seen as a user commodity (including it
1350 should suffice to fully use gdcm). It is nowhere including within
1351 any of the kernel files src/*.cxx and src/*.h.
1353 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1354 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
1355 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
1357 * src/gdcm*.cxx only include their corresponding include file
1358 (as opposed to gdcm.h)
1359 * gdcmPython/gdcm.i changed accordingly
1360 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
1361 the autogen.sh generated "make snapshot" command to work.
1362 * autogen.sh removed history related references to crea package.
1364 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1365 * distutilsSwigCPlusPlus.py work around some swig portability
1368 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1369 * Eventually, python/gdcmPython was renamed to gdcmPython. This
1370 was done in a last ditch attempt to get setup.py _really_
1371 operationnal. The python/gdcmPython layaout add the advantage
1372 of hidding away the python related distutils specific files
1373 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
1374 Alas, the src directory was out of scope (i.e. it's relative
1375 position to setup.py was ../src) which made things impossible to
1376 handle (see previous version of python/setup.py). Crossing fingers...
1378 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1379 * python/setup.py now works on Un*x. (harder than I thougth)
1380 * python/distutilsSwigCPlusPlus.py can now have include files
1381 among the list of sources.
1383 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1384 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
1385 * modifications in MSVC projects
1387 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1388 * As stated by the first lines of Test/ExceptionAndPython/README, it
1389 looks like we can move back to original usage of exception within
1390 src/gdcm* and hence remove the errno stuff that was introduced
1391 as a quick and dirty fixture of this problem (added to the TODO).
1392 * Doc/Doxyfile configuration file for Doxygen and corresponding
1393 README file for usage added.
1394 * Test/testWrite.cxx added. This new test comes from a split of
1395 test.cxx that is now reverted to its original purpous i.e.
1396 testing the proper parsing of a Dicom related file.
1397 testWrite.cxx concentrates on testing the IO part of gdcm.
1398 * Test/bug1.cxx (containing a bug on WIn32) added.
1399 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1400 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1401 whose purpose is to publish the content of the TagNames of the
1402 Dicom public dictionnary were not accessible without an
1403 instance of class gdcmHeader.
1404 - those methods are now static methods of gdcmDictSet and hence
1405 require no instances at all to be invocated.
1406 - within gdcmDictSet this change required to change some method
1407 to class methods (i.e. are now static) among which SetDictPath
1408 (renamed to BuildDictPath) and LoadDefaultPubDict.
1409 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1410 the above changes by calling the new method classes of gdcmDictSet.
1411 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1412 the above to be effective.
1413 * python/gdcmPython: in order to wrap properly the above changes
1414 for Python, swig version now needs to be > 1.3.17.
1415 * python/gdcmPython/Makefile fixed to adapt itself to new
1416 configure/make shema introduced by Johan Montagnat (thanks for the
1417 contribution). Alas this Makefile cannot be turned into a proper
1418 Makefile.am without some heavy changes in the configure.in
1419 (for python dectection).
1420 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1421 now avoids publishing the empty entries.
1423 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1424 * python/setup.py : bug fix concerning install under windows
1425 ExtraPath reused :-P
1426 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1428 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1429 * Dicts/dicomV3.dic : remove double spaces !!!
1430 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1431 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1434 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1435 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1436 method. Doxygenation.
1437 * src/gdcm.h clean up of JPR spurious comments.
1439 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1440 * python/distutilsSwigCPlusPlus.py now properly collects the
1441 shadow classes generated by "swig -c++" (gdcm.py in our case)
1442 when using "python setup.py install".
1443 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1444 reexports the working classes.
1445 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1446 by the classical C errno scheme. This is to prevent an obscure
1447 behavior of the python wrappers when importing wxPython.wx prior
1448 to gdcmPython (which ended up in an abort call). An illustration
1449 of this oddity can be found in the Test/ExceptionAndPython
1450 subdir (see the README file). This problem probably due to
1451 an combination of g++ and dynamic loading.
1452 * added Test/ExceptionAndPython (see above)
1454 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1455 * Changed the layout of the python part to avoid bloating main
1456 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1457 i.e. the distutils arsenal. All the python related stuff is
1458 again in a python subdir, but the package itself is now in
1460 * setup.py was cleaned up:
1461 - pythonIncludePath removed
1462 - python setup.py bdist target is now functional.
1463 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1464 collision with other packages). gdcmPython/demo/*.py changed
1467 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1468 * python subdir moved to gdcmPython (preparation of distutils packaging).
1469 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1470 distutils installer is operational.
1471 * - gdcmPython/__init__.py now properly loads the swig generated
1472 shadow classes (from gdcm.py).
1473 - gdcmPython/demo/*.py changed to import the package gdcmPython
1474 instead of gdcmPython/demo/load.py.
1475 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1477 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1478 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1479 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1480 entries within the associated public Dicom dictionary resp. the same
1481 information but sorted by the fourth field (PAT, IMG, DIR) of the
1483 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1484 are now in the "???" group.
1485 - python/gdcm.i changed accordingly,
1486 - python/demo/printGroupedPublicDict.py added, that gives an example
1487 of the above new functionalities in Python.
1489 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1490 * src/gdcm.h, gdcmHeader.cxx:
1491 - historic references to glib's g_malloc and g_free (#defined)
1492 were definitively removed.
1493 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1494 * src/gdcmElValSet.cxx:
1495 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1496 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1497 - GetElValue(string) renamed to GetElValueByName.
1498 - Added GetElementByName(string).
1499 * src/gdcmHeader.cxx: added
1500 - GetPubElValRepByNumber(guint16, guint16)
1501 - GetPubElValRepByName(string)
1502 - GetShaElValRepByNumber(guint16, guint16)
1503 - GetShaElValRepByName(string)
1504 - GetShaElValByNumber(guint16, guint16)
1505 - GetShaElValRepByName(string)
1506 - GetElValRepByNumber(guint16, guint16)
1507 - GetElValRepByName(string)
1508 - GetElValByNumber(guint16, guint16)
1509 - GetElValRepByName(string)
1510 * Doc/requirements.txt added.
1512 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1513 * Test/Makefile building now depends on the one of libgdcm.so
1514 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1515 pixel data) aware which enables finding the address (offset) of
1516 the pixel data of JPEG encoded DICOM files. This leaves only a single
1517 file in the testSuite whose pixel data address (offset) is unknown.
1518 * python/testSuite.py changed accordingly.
1520 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1521 * VC++ has some strong limitations when working with the STL, as stated
1522 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1523 "Also note that some STL containers (map, set, queue, list, deque)
1524 cannot be exported. [...]
1525 Some STL classes contain nested classes. These classes can not
1527 This is caused by a designed limitation that once a template
1528 class is instantiated, it can not be re-instantiated and
1530 Since our usage of map<> is ubiquitous in gdcm, this "designed
1531 limitation" of VC++ is a pitfall.
1532 Hence the Python wrappers of gdcm cannot be incrementally linked
1533 against the c++ dynamic library. The dirty but only workaround is
1534 to forget about incremental link of dynamic libraries and to generate
1535 the Python wrappers library with the inclusions of the underlying C++
1537 The following modifications concern this matter on Win32/VC++:
1538 - wrapping python correct with standalone wrapped dll (don't use separate
1539 dll under windows !!!!)
1540 - python21_d debug mode enabled (ask Frog how to use it :-)
1541 - NO problem with having an STL member of class for example string in C++
1542 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1543 - Python test of dcmlib in Python is ok under windows on a large set
1545 * removed glib references
1546 * typedef's inserted in gdcm.i for correct swig type management
1548 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1549 * python/demo/*.py load.py extracted from test.py. Added explore.py
1550 that only displays required tags and testAll.py that parses all
1551 the files of the testsuite without using unittest.
1552 * python/testSuite.py other additional test on new files added.
1553 * Data/* new test files added accordingly to the testSuite.
1554 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1555 the vr in the file differs from the one of the dictionary.
1557 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1558 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1559 values, but limits itself to values which are below a user specified
1560 size (by default 1024 bytes).
1561 * python/gdcm.i : elements not loaded (because their size is above the
1562 user specified treshold) are exported with their TagKey as key of the
1563 python dictionary. This enables the testsuite to make some checks
1564 on the unloaded elements (since we have their offset and size).
1565 * python/testSuite.py
1566 - now tests for the existence and proper value of the pixel data
1567 - two new examples added.
1568 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1570 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1571 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1572 aware. See the strategy comments in gdcmHeader::FindeLength().
1573 * Test/test.cxx now accepts a filename as first argument.
1574 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1575 * python/testSuite.py changed to integrate test on above files.
1577 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1578 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1579 the vr was also RET.
1580 * python/testSuite.py more tests added.
1582 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1583 * python/testSuite.py unittest test suite added (uses Data)
1584 * Data/* dcm and acr files for the test suite.
1585 * glib dependance removed from un*x version. We now use ISO C99
1586 7.18 Integer types (see stdint.h)
1587 - python/Makefile, src/Makefile src/gdcm.h
1588 * src/ when an explicit vr (like dicom files) suddenly poped an
1589 implicit element we use to mark the underlying DictEntry of the
1590 concerned ElValue with "Implicit". This strategy was damageable
1591 too the public or provite dictionaries, since some of their vr
1592 would be changed. Since Header::FindLength heavily relies on the
1593 detection by Header::FindVR of falsely explicit elements, I
1594 added an extra ImplicitVr member to ElValue (boolean).
1595 The rest of the changes we the necessary adaptations.
1597 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1598 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1600 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1602 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1603 * Adaptation for porting to VC++:
1605 o forced to use std namespace (for string to be known)
1606 o all class use __declspec export style on WIN32
1607 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1608 (in stdlib.h on Win32 but in std:: for gcc)
1609 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1610 variable GDCM_DICT_PATH.
1611 * src/gdcmHeader.cxx verbose comments made discrete.
1613 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1614 * python/gdcm.i: added a typemap that converts a C++ hashing table
1615 to native Python dictionary.
1616 * python/demo/test.py:
1617 - now uses the native dictionary for exploration of gdcmHeader.
1618 - takes an optional filename argument (the file to parse).
1619 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1620 PubElVals hashing table.
1621 * Dicts/dicomV3.dic removed error prone trailing spaces.
1623 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1624 * Python wrapping process moved away from src/Makefile to
1625 newly created python/Makefile (as well as gdcm.i)
1626 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1627 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1628 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1629 from the environement variable GDCM_DICT_PATH (when existing).
1630 * src/gdcmDict::GetTag bug fix.
1632 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1633 * Straightforward temporary fixes for swig to build the python wrappers.
1634 src/Makefile now has a python working entry [by working we mean
1635 that we can import de shadow classes without errors].
1637 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1638 * hashtest.cxx removed (since allready in Test)
1639 * src/gdcmlib.h renamed to src/gdcm.h
1640 * src/dcm.i renamed to src/gdcm.i
1641 * src/Makefile prepared for python wrapping
1643 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1644 * src/gdcmHeader.cxx :
1645 - Parsing of header is now separated from loading of element values
1646 (see gdcmHeader::LoadElements).
1647 - general clean up of hopefully all file access (creation of
1648 ReadInt16 and ReadInt32)
1650 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1651 * src/gdcmHeader.cxx :
1652 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1654 - SetLgrElem renamed to SetLength
1655 - GetLgrElem renamed to GetLength
1656 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1657 * src/gdcmElValSet.cxx fixed both GetElValue methods
1658 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1659 due to IdoDude was cleaned out.
1661 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1662 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1663 concentrates on finding the value representation (when it exists).
1664 RecupLgr now only finds the element value length, and it avoids
1665 returning the unecessary skL (skipped length).
1666 Also, offsetCourant was simply removed (with taille_fich) since
1667 it was redundant with the File position internals (by using
1668 ftell and fseek). This also made skL (see above in RecupLgr) usage
1670 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1671 on the libido specificities which are handled through class
1673 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1676 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1677 * Truckload of changes. Parsing of header is barely functional
1678 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1680 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1681 * src/gdcmHeader.cxx many addons of low level methods
1683 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1684 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1685 and _IdDcmSWAP_LONG.
1687 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1688 * This corresponds to all the changes decided at the meeting of
1689 May 23 2002. Needless to say we are running late...