1 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
2 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
3 interpretation to data given by gdcmHeader. For instance there are
4 heuristics to get informations (look at different places).
5 * it also include a specific class: gdcmSerieHeaderHelper devoted to
6 sorting DICOM images based on different strategies.
7 * modified Makefiles accordingly.
8 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
9 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
10 when building in debug mode
11 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
13 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
14 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
15 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
16 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
17 * src/win32/libgdcmjpeg12.dsp was not dos format
18 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
19 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
20 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
21 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
23 * src/gdcmFile.cxx : bug fix in affectation type
24 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
25 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
26 * Modifs of MVSC projects to compile them. Not concerning 2 identic
27 symbols... futur problem ?
28 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
29 * src/win32/libgdcmijpeg12.dsp was missing
30 * modified gdcm.dsw accordingly
31 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
32 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
33 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
34 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
35 commit of JPR (before his hollidays to facilitate our work).
36 * setup.py : bug fix in code. Modifications made while the last commit
37 of JPR. The code hasn't been tested before the commit... it's so
38 useless to make that (for best programmer that is JPR) !!!
39 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
40 * tagged the current version as Version0_3 (i.e. version 0.3)
41 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
42 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
43 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
44 * *.dsp : modifications to use new libgdcmijpeg8 library
45 * setup.py : bug fix on VTKPATH variable
46 * PACKAGER : adding all concerning windows
47 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
48 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
50 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
51 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
52 test suite reported error.
53 * PACKAGER file added (describes what a packager must do when
54 packaging a new release).
55 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
56 * configure.in: upgraded version number to 0.3.0
57 * fixing build of rpm (through rpm -ta):
58 - Doc/Makefile.am exports proper doxygen files
59 - src/jpeg/libijg8/Makefile.am exports the include files.
60 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
61 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
62 * src/gdcmHeader.h : formatting code
63 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
64 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
65 We were obtaining error message from vtk. Now, creation of file list
66 is made in an internal list to prevent this problem.
67 Bug fix when output is empty.
68 Bug fix in update of progress value. Previous commit for this was a bad
70 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
71 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
72 * src/gdcmHeader.h : added method to get the file name
73 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
74 files. Added method to remove all files on the input
75 Added FIXME comment concerning the bad parsing of header made by
76 ExecuteInformation method (in ExecuteData method)
77 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
78 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
79 when using make instal.
80 * src/gdcmFile.cxx : bug fix under Window after JPR commit
81 RQ : the JPR doesn't appear in the ChangeLog... normal for him
82 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
83 * setup.py : adding include dir of jpeg lib to compile all sources
84 * */Win32/*.dsp : JPR fix for windows compilation
85 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
86 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
88 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
89 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
90 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
91 * setup.py is again effective on un*x (takes into account the
92 addon of the jpeg library)
93 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
94 * Doc/Doxy* updated (includes above enhancements)
95 * INSTALL now points to web documentation
96 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
97 * src/gdcmHeader.h doesn't make unnecessary reference to
99 * gdcmPython/Makefile.am now avoids calling the wrappers for the
101 * src/gdcm*.[cxx|h] :
102 - to allow compilation with gcc 3.x
103 -- clean up of STL usage (added explicit usage of std::)
104 -- small fixes on exceptions.
105 Note: linking not tested !
106 - clean of doxygen comments to avoid warnings at documentation
108 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
109 dependent convertion).
110 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
111 * Clean up of previous JPR garbage commit (not even commented in the
113 - Test/Makefile.am removed the reference to unexisting testTS.cxx
114 - moved all jpeg related files from src to src/jpeg/libijg8, with
115 addition/modification of Makefile.am and configure.in.
116 - the testSuite is still brain damage (not guilty).
117 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
118 * WrapVTK.py : modifications to get correctly vtk source files to
120 * vtk/vtkGdcmReader.cxx : modification for an already existing name
121 (FileName -> Filename)
122 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
123 * vtk/vtkGdcmReader.[cxx/h]:
124 - UpdateProgress method should now be effective
125 - removed the limitation on having only images loaded (as opposed
127 - when building a stack of images/volume, a lesser number of
128 gdcmHeader and gdcmFile instances should be used (hopefully
129 accelerating things).
130 - when building a stack of images/volumes, files which are not
131 loadable (wrong path-filename, wrong permissions on existing file,
132 or file not parsable by gdcm) are replaced with a black image
133 in the stack (for the caller to notice the problem).
134 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
135 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
136 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
137 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
138 between standard library (std) and vtk library (problems are found
139 under Windows... thanks Windows !)
140 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
141 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
143 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
144 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
145 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
146 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
147 * When compiling with distutils (see setup.py) the C++ compiler is
148 called with different flags than the default ones (with automake).
149 In order to fix all those warning, I compiled gdcm with the command
150 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
151 and went for warning fixes:
152 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
153 up from unused variables.
154 - vtk/vtkGdcmReader.cxx: potential bug fix.
155 * src/gdcmHeader.h: Doxygen warning cleanup
156 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
158 - typemaps correction to take into account the systematic replacement
159 of "using namespace std" with std:: prefix e.g. std::list,
160 std::string... (cf changes of 2003-05-21).
161 - gdcmGlob global variable of type gdcmGlobal (defined in
162 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
163 exported to Python a as cvar.
164 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
165 and GetPubDictTagNamesByCategory() as a replacement for deprecated
166 gdcmDictSet.GetPubDictTagNames() and
167 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
169 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
170 with the above changes.
171 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
172 * setup.py, manifest.in : bug fix under linux
173 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
174 * Modification of setup.py to compile vtk part too. Then, we have 2
175 wrappers which must work with same distutils. For that, we have a
176 generic distutils in distusiltsWrapping.py ; with :
177 - build_extWrap class to wrap generically all extensions,
178 - ExtensionWrap base class for all wrapping extension that contains
180 - Wrapper interface which wrap sources
181 + In WrapSwig.py we have extension and wrapper for Swig
182 + In WrapVTK.py we have extension and wrapper for VTK
183 * MANIFEST.in : modifications to consider vtk directory and new python
184 files for compilation
185 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
186 * Added python wrappers of vtkGdcmReader vtk class (see the
187 source in vtk/vtkGdcmReader.cxx) :
188 - vtk/Makefile.am now builds a library
189 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
190 python library (as opposed to _gdcm.so wich are the python
191 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
192 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
194 - configure.in has an additional flag --enable-vtk that needs
195 to be set to enable compilation of vtk related code, that is:
196 + vtk/vtkGdcmReader.so and
197 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
198 + gdcmPython/vtkgdcmPython.so (see above)
199 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
200 be read when compressed or when HighBit + 1 != BitsStored),
201 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
202 the usage of the python wrapper of vtkGdcmReader vtk class.
203 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
204 * src/*.[h] all occurences of stl classes are now prefixed with
205 std::, and all occurences of "using namespace std;" where removed.
206 This is to avoid pollution of global namespace in included files.
207 Apparently vtk does not avoid this pitfall: when using both
208 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
209 collision of various stl members (principally cout...).
210 * gdcmPython/testSuite.py now cleanly removes temprory generated
212 * gdcmPython/gdcm.i now declares a typemap for std::string (to
213 comply with above changes)
214 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
215 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
216 * vtk/vtkGdcmReader.cxx now properly inports the image in the
217 vtk data structure (an image Flip was required).
218 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
219 * cosmetic changes in documentation.
220 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
221 * src/gdcmHeader.cxx: the constructor no longer exits when an
222 unexisting file is given as argument.
223 * The subdirectory Data (containing all the images used for the
224 test suite) is not part of this repository anymore. A new module
225 containing those images is now available at
226 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
227 with the name gdcmData.
228 All the python scripts (including the package initialisation file
229 gdcmPython/__init__.py) were adapated to take this change into
230 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
231 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
232 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
233 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
234 demo of the usage of this class.
235 Compilation of this vtk part is only done when using the --enable-vtk
236 at configure (or autogen.sh) stage.
237 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
238 * More memmory link related corrections and documentation fixes.
240 - maximum info is obtained with a command of the form:
241 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
242 --show-reachable=yes PrintHeader
243 - the remaining reachable blocks seem to come from the STL
244 allocation scheme through the usage of map and list. It looks
245 like this memory cannot be freed but it is not a memory leak
246 (in fact further invocation to the STL would recollect the
247 unused memory allthough it cannot explicitely be freed).
248 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
249 of displaying an image parsed with gdcm and displayed with VTK.
250 Note: some images don't seem to work e.g.
251 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
252 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
253 Allthough this weakens the semantics, it is a ditch attempt to
254 make gdcm more thread friendly.
255 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
256 * Memory link hunt (by using valgrind through the command
257 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
258 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
259 gdcmHeader::_dicom_vr.
260 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
261 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
263 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
264 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
265 * src/Makefile.am now exports all the necessary include files at
268 * UpdateGroupLength replaced by new one
270 * UpdateGroupLength re-written using H-Table
271 (named UpdateGroupLengthNew untill checks are over)
273 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
274 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
275 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
277 - gdcmHeader::GetPubElValSet removed.
278 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
279 UpdateGroupLength, WriteElements, Write.
280 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
281 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
282 carried the same semantics.
283 - src/gdcmHeaderIdo.cxx changed accordingly.
284 - gdcmFile::WriteBase now regroups all the codes from previous
285 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
286 - enum FileType moved to gdcmCommon.h
287 * src/gdcmHeader.cxx AddDefault trashed
289 * getimageDataSize now calls gdcmGetXSize
290 * Test/*.cxx changed to agree with above changes
291 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
292 * src/gdcmHeader.h: LoadElements() is not a public method anymore
293 (to avoid double call by end user).
294 * Test/*.cxx LoadElements() doesn't need to be called explicitely
295 by end user, since gdcmHeader::gdcmHeader now handles it.
296 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
297 * gdcm/Doc many doxygen changes:
298 - Doxyfile now has two different versions, DoxyfileUsers that generates
299 the html.users end users oriented documentation and
300 DoxyfileDeveloppers that generates the html.developper developper
301 oriented documentation.
302 - README changed accordingly
303 - requirement.txt removed (old design info moved to TODO).
304 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
305 DoxyMainPage.txt, DoxyPython.txt provide more information.
306 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
307 be updated by simply regenerating the docs with doxygen and copying
308 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
309 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
310 all the tests in the form "if (<map>.count() >1)" were removed.
311 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
312 ill-formed documentation sections.
313 * src/gdcmHeader.cxx: ditto
314 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
315 * setup.py fixed for un*x (needed macro for stdint.h)
316 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
317 un*ces with sh-utils test utility.
318 * gdcmPython/demo/test.py renamed to PrintHeader.py
319 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
320 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
321 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
322 * src/gdcm*.cxx JPR's bad inclusion fixed.
323 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
324 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
325 * gdcmPython/demo/test.py changed accordingly.
326 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
327 * gdcmPython/Makefile.am fixed linking against libstdc++
328 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
329 * Swig subdir (historical tests of swig version 1.3.17++) removed
330 * Test/testChangeEntete.cxx some lines commented out in order to make
332 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
333 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
334 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
335 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
336 hence the user doesn't need this explicit call.
337 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
338 i.e. LoadElements() call removed.
339 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
340 - src/Makefile.am declares the proper flag for g++.
341 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
342 for adding user defined new tags.
343 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
344 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
345 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
346 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
347 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
348 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
349 src/Makefile.am : the project should properly compile and install
350 with the autotools, included the python wrappers part.
351 * gdcm.spec.in : added a spec file for RPM packaging.
352 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
353 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
354 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
355 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
356 to exported to the environement (see gdcmPython/testSuite.py
358 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
359 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
360 ElValue class renamed to gdcmElValue for obvious consistency reasons.
361 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
362 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
363 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
364 * gdcmPython/__init__.py doesn't crash anymore when running in
365 in InstallMode or PreInstallMode but with an environement given
366 value of GDCM_DICT_PATH.
367 * src/gdcmDictSet.[cxx/h] coding style.
368 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
369 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
370 * src/gdcm.h general comments moved to TODO, and README
371 * src/gdcm.h should now be seen as a user commodity (including it
372 should suffice to fully use gdcm). It is nowhere including within
373 any of the kernel files src/*.cxx and src/*.h.
374 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
375 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
376 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
378 * src/gdcm*.cxx only include their corresponding include file
379 (as opposed to gdcm.h)
380 * gdcmPython/gdcm.i changed accordingly
381 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
382 the autogen.sh generated "make snapshot" command to work.
383 * autogen.sh removed history related references to crea package.
384 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
385 * distutilsSwigCPlusPlus.py work around some swig portability
387 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
388 * Eventually, python/gdcmPython was renamed to gdcmPython. This
389 was done in a last ditch attempt to get setup.py _really_
390 operationnal. The python/gdcmPython layaout add the advantage
391 of hidding away the python related distutils specific files
392 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
393 Alas, the src directory was out of scope (i.e. it's relative
394 position to setup.py was ../src) which made things impossible to
395 handle (see previous version of python/setup.py). Crossing fingers...
396 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
397 * python/setup.py now works on Un*x. (harder than I thougth)
398 * python/distutilsSwigCPlusPlus.py can now have include files
399 among the list of sources.
401 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
402 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
403 * modifications in MSVC projects
404 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
405 * As stated by the first lines of Test/ExceptionAndPython/README, it
406 looks like we can move back to original usage of exception within
407 src/gdcm* and hence remove the errno stuff that was introduced
408 as a quick and dirty fixture of this problem (added to the TODO).
409 * Doc/Doxyfile configuration file for Doxygen and corresponding
410 README file for usage added.
411 * Test/testWrite.cxx added. This new test comes from a split of
412 test.cxx that is now reverted to its original purpous i.e.
413 testing the proper parsing of a Dicom related file.
414 testWrite.cxx concentrates on testing the IO part of gdcm.
415 * Test/bug1.cxx (containing a bug on WIn32) added.
416 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
417 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
418 whose purpose is to publish the content of the TagNames of the
419 Dicom public dictionnary were not accessible without an
420 instance of class gdcmHeader.
421 - those methods are now static methods of gdcmDictSet and hence
422 require no instances at all to be invocated.
423 - within gdcmDictSet this change required to change some method
424 to class methods (i.e. are now static) among which SetDictPath
425 (renamed to BuildDictPath) and LoadDefaultPubDict.
426 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
427 the above changes by calling the new method classes of gdcmDictSet.
428 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
429 the above to be effective.
430 * python/gdcmPython: in order to wrap properly the above changes
431 for Python, swig version now needs to be > 1.3.17.
432 * python/gdcmPython/Makefile fixed to adapt itself to new
433 configure/make shema introduced by Johan Montagnat (thanks for the
434 contribution). Alas this Makefile cannot be turned into a proper
435 Makefile.am without some heavy changes in the configure.in
436 (for python dectection).
437 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
438 now avoids publishing the empty entries.
439 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
440 * python/setup.py : bug fix concerning install under windows
442 * gdcm.dsw : bug fix concerning path for libraries for python !!!
443 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
444 * Dicts/dicomV3.dic : remove double spaces !!!
445 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
446 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
448 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
449 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
450 method. Doxygenation.
451 * src/gdcm.h clean up of JPR spurious comments.
452 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
453 * python/distutilsSwigCPlusPlus.py now properly collects the
454 shadow classes generated by "swig -c++" (gdcm.py in our case)
455 when using "python setup.py install".
456 * python/gdcmPython/__init__.py imports gdcm.py and only manually
457 reexports the working classes.
458 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
459 by the classical C errno scheme. This is to prevent an obscure
460 behavior of the python wrappers when importing wxPython.wx prior
461 to gdcmPython (which ended up in an abort call). An illustration
462 of this oddity can be found in the Test/ExceptionAndPython
463 subdir (see the README file). This problem probably due to
464 an combination of g++ and dynamic loading.
465 * added Test/ExceptionAndPython (see above)
466 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
467 * Changed the layout of the python part to avoid bloating main
468 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
469 i.e. the distutils arsenal. All the python related stuff is
470 again in a python subdir, but the package itself is now in
472 * setup.py was cleaned up:
473 - pythonIncludePath removed
474 - python setup.py bdist target is now functional.
475 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
476 collision with other packages). gdcmPython/demo/*.py changed
478 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
479 * python subdir moved to gdcmPython (preparation of distutils packaging).
480 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
481 distutils installer is operational.
482 * - gdcmPython/__init__.py now properly loads the swig generated
483 shadow classes (from gdcm.py).
484 - gdcmPython/demo/*.py changed to import the package gdcmPython
485 instead of gdcmPython/demo/load.py.
486 - gdcmPython/testSuite.py changed to import the package gdcmPython.
488 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
489 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
490 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
491 entries within the associated public Dicom dictionary resp. the same
492 information but sorted by the fourth field (PAT, IMG, DIR) of the
494 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
495 are now in the "???" group.
496 - python/gdcm.i changed accordingly,
497 - python/demo/printGroupedPublicDict.py added, that gives an example
498 of the above new functionalities in Python.
499 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
500 * src/gdcm.h, gdcmHeader.cxx:
501 - historic references to glib's g_malloc and g_free (#defined)
502 were definitively removed.
503 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
504 * src/gdcmElValSet.cxx:
505 - GetElement(guint32, guint32) renamed to GetElementByNumber.
506 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
507 - GetElValue(string) renamed to GetElValueByName.
508 - Added GetElementByName(string).
509 * src/gdcmHeader.cxx: added
510 - GetPubElValRepByNumber(guint16, guint16)
511 - GetPubElValRepByName(string)
512 - GetShaElValRepByNumber(guint16, guint16)
513 - GetShaElValRepByName(string)
514 - GetShaElValByNumber(guint16, guint16)
515 - GetShaElValRepByName(string)
516 - GetElValRepByNumber(guint16, guint16)
517 - GetElValRepByName(string)
518 - GetElValByNumber(guint16, guint16)
519 - GetElValRepByName(string)
520 * Doc/requirements.txt added.
521 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
522 * Test/Makefile building now depends on the one of libgdcm.so
523 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
524 pixel data) aware which enables finding the address (offset) of
525 the pixel data of JPEG encoded DICOM files. This leaves only a single
526 file in the testSuite whose pixel data address (offset) is unknown.
527 * python/testSuite.py changed accordingly.
528 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
529 * VC++ has some strong limitations when working with the STL, as stated
530 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
531 "Also note that some STL containers (map, set, queue, list, deque)
532 cannot be exported. [...]
533 Some STL classes contain nested classes. These classes can not
535 This is caused by a designed limitation that once a template
536 class is instantiated, it can not be re-instantiated and
538 Since our usage of map<> is ubiquitous in gdcm, this "designed
539 limitation" of VC++ is a pitfall.
540 Hence the Python wrappers of gdcm cannot be incrementally linked
541 against the c++ dynamic library. The dirty but only workaround is
542 to forget about incremental link of dynamic libraries and to generate
543 the Python wrappers library with the inclusions of the underlying C++
545 The following modifications concern this matter on Win32/VC++:
546 - wrapping python correct with standalone wrapped dll (don't use separate
547 dll under windows !!!!)
548 - python21_d debug mode enabled (ask Frog how to use it :-)
549 - NO problem with having an STL member of class for example string in C++
550 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
551 - Python test of dcmlib in Python is ok under windows on a large set
553 * removed glib references
554 * typedef's inserted in gdcm.i for correct swig type management
555 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
556 * python/demo/*.py load.py extracted from test.py. Added explore.py
557 that only displays required tags and testAll.py that parses all
558 the files of the testsuite without using unittest.
559 * python/testSuite.py other additional test on new files added.
560 * Data/* new test files added accordingly to the testSuite.
561 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
562 the vr in the file differs from the one of the dictionary.
563 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
564 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
565 values, but limits itself to values which are below a user specified
566 size (by default 1024 bytes).
567 * python/gdcm.i : elements not loaded (because their size is above the
568 user specified treshold) are exported with their TagKey as key of the
569 python dictionary. This enables the testsuite to make some checks
570 on the unloaded elements (since we have their offset and size).
571 * python/testSuite.py
572 - now tests for the existence and proper value of the pixel data
573 - two new examples added.
574 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
575 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
576 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
577 aware. See the strategy comments in gdcmHeader::FindeLength().
578 * Test/test.cxx now accepts a filename as first argument.
579 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
580 * python/testSuite.py changed to integrate test on above files.
581 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
582 * Dicts/dicomV3.dic removed all the trailing (RET) when the
584 * python/testSuite.py more tests added.
585 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
586 * python/testSuite.py unittest test suite added (uses Data)
587 * Data/* dcm and acr files for the test suite.
588 * glib dependance removed from un*x version. We now use ISO C99
589 7.18 Integer types (see stdint.h)
590 - python/Makefile, src/Makefile src/gdcm.h
591 * src/ when an explicit vr (like dicom files) suddenly poped an
592 implicit element we use to mark the underlying DictEntry of the
593 concerned ElValue with "Implicit". This strategy was damageable
594 too the public or provite dictionaries, since some of their vr
595 would be changed. Since Header::FindLength heavily relies on the
596 detection by Header::FindVR of falsely explicit elements, I
597 added an extra ImplicitVr member to ElValue (boolean).
598 The rest of the changes we the necessary adaptations.
599 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
600 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
602 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
603 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
604 * Adaptation for porting to VC++:
606 o forced to use std namespace (for string to be known)
607 o all class use __declspec export style on WIN32
608 - src/gdcmUtil.cxx new Exit method that wraps the exit call
609 (in stdlib.h on Win32 but in std:: for gcc)
610 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
611 variable GDCM_DICT_PATH.
612 * src/gdcmHeader.cxx verbose comments made discrete.
613 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
614 * python/gdcm.i: added a typemap that converts a C++ hashing table
615 to native Python dictionary.
616 * python/demo/test.py:
617 - now uses the native dictionary for exploration of gdcmHeader.
618 - takes an optional filename argument (the file to parse).
619 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
620 PubElVals hashing table.
621 * Dicts/dicomV3.dic removed error prone trailing spaces.
622 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
623 * Python wrapping process moved away from src/Makefile to
624 newly created python/Makefile (as well as gdcm.i)
625 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
626 * src/gdcmHeader::FindLength only looks for current vr when necessary.
627 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
628 from the environement variable GDCM_DICT_PATH (when existing).
629 * src/gdcmDict::GetTag bug fix.
630 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
631 * Straightforward temporary fixes for swig to build the python wrappers.
632 src/Makefile now has a python working entry [by working we mean
633 that we can import de shadow classes without errors].
634 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
635 * hashtest.cxx removed (since allready in Test)
636 * src/gdcmlib.h renamed to src/gdcm.h
637 * src/dcm.i renamed to src/gdcm.i
638 * src/Makefile prepared for python wrapping
639 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
640 * src/gdcmHeader.cxx :
641 - Parsing of header is now separated from loading of element values
642 (see gdcmHeader::LoadElements).
643 - general clean up of hopefully all file access (creation of
644 ReadInt16 and ReadInt32)
645 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
646 * src/gdcmHeader.cxx :
647 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
649 - SetLgrElem renamed to SetLength
650 - GetLgrElem renamed to GetLength
651 - ~gdcmHeader() made virtual to pesky warning messages at compile.
652 * src/gdcmElValSet.cxx fixed both GetElValue methods
653 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
654 due to IdoDude was cleaned out.
655 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
656 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
657 concentrates on finding the value representation (when it exists).
658 RecupLgr now only finds the element value length, and it avoids
659 returning the unecessary skL (skipped length).
660 Also, offsetCourant was simply removed (with taille_fich) since
661 it was redundant with the File position internals (by using
662 ftell and fseek). This also made skL (see above in RecupLgr) usage
664 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
665 on the libido specificities which are handled through class
667 * Test/implicit_vr.dcm dicom v3 in implicit value representation
669 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
670 * Truckload of changes. Parsing of header is barely functional
671 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
672 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
673 * src/gdcmHeader.cxx many addons of low level methods
674 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
675 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
677 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
678 * This corresponds to all the changes decided at the meeting of
679 May 23 2002. Needless to say we are running late...