1 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
2 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
4 * src/gdcmFile.cxx : bug fix in affectation type
5 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
6 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
7 * Modifs of MVSC projects to compile them. Not concerning 2 identic
8 symbols... futur problem ?
9 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
10 * src/win32/libgdcmijpeg12.dsp was missing
11 * modified gdcm.dsw accordingly
12 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
13 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
14 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
15 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
16 commit of JPR (before his hollidays to facilitate our work).
17 * setup.py : bug fix in code. Modifications made while the last commit
18 of JPR. The code hasn't been tested before the commit... it's so
19 useless to make that (for best programmer that is JPR) !!!
20 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
21 * tagged the current version as Version0_3 (i.e. version 0.3)
22 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
23 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
24 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
25 * *.dsp : modifications to use new libgdcmijpeg8 library
26 * setup.py : bug fix on VTKPATH variable
27 * PACKAGER : adding all concerning windows
28 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
29 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
31 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
32 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
33 test suite reported error.
34 * PACKAGER file added (describes what a packager must do when
35 packaging a new release).
36 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
37 * configure.in: upgraded version number to 0.3.0
38 * fixing build of rpm (through rpm -ta):
39 - Doc/Makefile.am exports proper doxygen files
40 - src/jpeg/libijg8/Makefile.am exports the include files.
41 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
42 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
43 * src/gdcmHeader.h : formatting code
44 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
45 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
46 We were obtaining error message from vtk. Now, creation of file list
47 is made in an internal list to prevent this problem.
48 Bug fix when output is empty.
49 Bug fix in update of progress value. Previous commit for this was a bad
51 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
52 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
53 * src/gdcmHeader.h : added method to get the file name
54 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
55 files. Added method to remove all files on the input
56 Added FIXME comment concerning the bad parsing of header made by
57 ExecuteInformation method (in ExecuteData method)
58 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
59 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
60 when using make instal.
61 * src/gdcmFile.cxx : bug fix under Window after JPR commit
62 RQ : the JPR doesn't appear in the ChangeLog... normal for him
63 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
64 * setup.py : adding include dir of jpeg lib to compile all sources
65 * */Win32/*.dsp : JPR fix for windows compilation
66 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
67 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
69 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
70 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
71 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
72 * setup.py is again effective on un*x (takes into account the
73 addon of the jpeg library)
74 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
75 * Doc/Doxy* updated (includes above enhancements)
76 * INSTALL now points to web documentation
77 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
78 * src/gdcmHeader.h doesn't make unnecessary reference to
80 * gdcmPython/Makefile.am now avoids calling the wrappers for the
83 - to allow compilation with gcc 3.x
84 -- clean up of STL usage (added explicit usage of std::)
85 -- small fixes on exceptions.
86 Note: linking not tested !
87 - clean of doxygen comments to avoid warnings at documentation
89 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
90 dependent convertion).
91 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
92 * Clean up of previous JPR garbage commit (not even commented in the
94 - Test/Makefile.am removed the reference to unexisting testTS.cxx
95 - moved all jpeg related files from src to src/jpeg/libijg8, with
96 addition/modification of Makefile.am and configure.in.
97 - the testSuite is still brain damage (not guilty).
98 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
99 * WrapVTK.py : modifications to get correctly vtk source files to
101 * vtk/vtkGdcmReader.cxx : modification for an already existing name
102 (FileName -> Filename)
103 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
104 * vtk/vtkGdcmReader.[cxx/h]:
105 - UpdateProgress method should now be effective
106 - removed the limitation on having only images loaded (as opposed
108 - when building a stack of images/volume, a lesser number of
109 gdcmHeader and gdcmFile instances should be used (hopefully
110 accelerating things).
111 - when building a stack of images/volumes, files which are not
112 loadable (wrong path-filename, wrong permissions on existing file,
113 or file not parsable by gdcm) are replaced with a black image
114 in the stack (for the caller to notice the problem).
115 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
116 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
117 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
118 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
119 between standard library (std) and vtk library (problems are found
120 under Windows... thanks Windows !)
121 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
122 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
124 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
125 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
126 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
127 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
128 * When compiling with distutils (see setup.py) the C++ compiler is
129 called with different flags than the default ones (with automake).
130 In order to fix all those warning, I compiled gdcm with the command
131 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
132 and went for warning fixes:
133 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
134 up from unused variables.
135 - vtk/vtkGdcmReader.cxx: potential bug fix.
136 * src/gdcmHeader.h: Doxygen warning cleanup
137 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
139 - typemaps correction to take into account the systematic replacement
140 of "using namespace std" with std:: prefix e.g. std::list,
141 std::string... (cf changes of 2003-05-21).
142 - gdcmGlob global variable of type gdcmGlobal (defined in
143 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
144 exported to Python a as cvar.
145 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
146 and GetPubDictTagNamesByCategory() as a replacement for deprecated
147 gdcmDictSet.GetPubDictTagNames() and
148 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
150 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
151 with the above changes.
152 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
153 * setup.py, manifest.in : bug fix under linux
154 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
155 * Modification of setup.py to compile vtk part too. Then, we have 2
156 wrappers which must work with same distutils. For that, we have a
157 generic distutils in distusiltsWrapping.py ; with :
158 - build_extWrap class to wrap generically all extensions,
159 - ExtensionWrap base class for all wrapping extension that contains
161 - Wrapper interface which wrap sources
162 + In WrapSwig.py we have extension and wrapper for Swig
163 + In WrapVTK.py we have extension and wrapper for VTK
164 * MANIFEST.in : modifications to consider vtk directory and new python
165 files for compilation
166 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
167 * Added python wrappers of vtkGdcmReader vtk class (see the
168 source in vtk/vtkGdcmReader.cxx) :
169 - vtk/Makefile.am now builds a library
170 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
171 python library (as opposed to _gdcm.so wich are the python
172 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
173 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
175 - configure.in has an additional flag --enable-vtk that needs
176 to be set to enable compilation of vtk related code, that is:
177 + vtk/vtkGdcmReader.so and
178 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
179 + gdcmPython/vtkgdcmPython.so (see above)
180 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
181 be read when compressed or when HighBit + 1 != BitsStored),
182 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
183 the usage of the python wrapper of vtkGdcmReader vtk class.
184 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
185 * src/*.[h] all occurences of stl classes are now prefixed with
186 std::, and all occurences of "using namespace std;" where removed.
187 This is to avoid pollution of global namespace in included files.
188 Apparently vtk does not avoid this pitfall: when using both
189 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
190 collision of various stl members (principally cout...).
191 * gdcmPython/testSuite.py now cleanly removes temprory generated
193 * gdcmPython/gdcm.i now declares a typemap for std::string (to
194 comply with above changes)
195 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
196 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
197 * vtk/vtkGdcmReader.cxx now properly inports the image in the
198 vtk data structure (an image Flip was required).
199 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
200 * cosmetic changes in documentation.
201 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
202 * src/gdcmHeader.cxx: the constructor no longer exits when an
203 unexisting file is given as argument.
204 * The subdirectory Data (containing all the images used for the
205 test suite) is not part of this repository anymore. A new module
206 containing those images is now available at
207 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
208 with the name gdcmData.
209 All the python scripts (including the package initialisation file
210 gdcmPython/__init__.py) were adapated to take this change into
211 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
212 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
213 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
214 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
215 demo of the usage of this class.
216 Compilation of this vtk part is only done when using the --enable-vtk
217 at configure (or autogen.sh) stage.
218 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
219 * More memmory link related corrections and documentation fixes.
221 - maximum info is obtained with a command of the form:
222 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
223 --show-reachable=yes PrintHeader
224 - the remaining reachable blocks seem to come from the STL
225 allocation scheme through the usage of map and list. It looks
226 like this memory cannot be freed but it is not a memory leak
227 (in fact further invocation to the STL would recollect the
228 unused memory allthough it cannot explicitely be freed).
229 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
230 of displaying an image parsed with gdcm and displayed with VTK.
231 Note: some images don't seem to work e.g.
232 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
233 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
234 Allthough this weakens the semantics, it is a ditch attempt to
235 make gdcm more thread friendly.
236 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
237 * Memory link hunt (by using valgrind through the command
238 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
239 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
240 gdcmHeader::_dicom_vr.
241 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
242 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
244 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
245 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
246 * src/Makefile.am now exports all the necessary include files at
249 * UpdateGroupLength replaced by new one
251 * UpdateGroupLength re-written using H-Table
252 (named UpdateGroupLengthNew untill checks are over)
254 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
255 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
256 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
258 - gdcmHeader::GetPubElValSet removed.
259 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
260 UpdateGroupLength, WriteElements, Write.
261 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
262 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
263 carried the same semantics.
264 - src/gdcmHeaderIdo.cxx changed accordingly.
265 - gdcmFile::WriteBase now regroups all the codes from previous
266 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
267 - enum FileType moved to gdcmCommon.h
268 * src/gdcmHeader.cxx AddDefault trashed
270 * getimageDataSize now calls gdcmGetXSize
271 * Test/*.cxx changed to agree with above changes
272 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
273 * src/gdcmHeader.h: LoadElements() is not a public method anymore
274 (to avoid double call by end user).
275 * Test/*.cxx LoadElements() doesn't need to be called explicitely
276 by end user, since gdcmHeader::gdcmHeader now handles it.
277 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
278 * gdcm/Doc many doxygen changes:
279 - Doxyfile now has two different versions, DoxyfileUsers that generates
280 the html.users end users oriented documentation and
281 DoxyfileDeveloppers that generates the html.developper developper
282 oriented documentation.
283 - README changed accordingly
284 - requirement.txt removed (old design info moved to TODO).
285 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
286 DoxyMainPage.txt, DoxyPython.txt provide more information.
287 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
288 be updated by simply regenerating the docs with doxygen and copying
289 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
290 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
291 all the tests in the form "if (<map>.count() >1)" were removed.
292 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
293 ill-formed documentation sections.
294 * src/gdcmHeader.cxx: ditto
295 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
296 * setup.py fixed for un*x (needed macro for stdint.h)
297 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
298 un*ces with sh-utils test utility.
299 * gdcmPython/demo/test.py renamed to PrintHeader.py
300 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
301 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
302 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
303 * src/gdcm*.cxx JPR's bad inclusion fixed.
304 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
305 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
306 * gdcmPython/demo/test.py changed accordingly.
307 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
308 * gdcmPython/Makefile.am fixed linking against libstdc++
309 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
310 * Swig subdir (historical tests of swig version 1.3.17++) removed
311 * Test/testChangeEntete.cxx some lines commented out in order to make
313 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
314 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
315 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
316 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
317 hence the user doesn't need this explicit call.
318 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
319 i.e. LoadElements() call removed.
320 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
321 - src/Makefile.am declares the proper flag for g++.
322 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
323 for adding user defined new tags.
324 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
325 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
326 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
327 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
328 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
329 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
330 src/Makefile.am : the project should properly compile and install
331 with the autotools, included the python wrappers part.
332 * gdcm.spec.in : added a spec file for RPM packaging.
333 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
334 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
335 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
336 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
337 to exported to the environement (see gdcmPython/testSuite.py
339 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
340 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
341 ElValue class renamed to gdcmElValue for obvious consistency reasons.
342 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
343 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
344 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
345 * gdcmPython/__init__.py doesn't crash anymore when running in
346 in InstallMode or PreInstallMode but with an environement given
347 value of GDCM_DICT_PATH.
348 * src/gdcmDictSet.[cxx/h] coding style.
349 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
350 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
351 * src/gdcm.h general comments moved to TODO, and README
352 * src/gdcm.h should now be seen as a user commodity (including it
353 should suffice to fully use gdcm). It is nowhere including within
354 any of the kernel files src/*.cxx and src/*.h.
355 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
356 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
357 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
359 * src/gdcm*.cxx only include their corresponding include file
360 (as opposed to gdcm.h)
361 * gdcmPython/gdcm.i changed accordingly
362 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
363 the autogen.sh generated "make snapshot" command to work.
364 * autogen.sh removed history related references to crea package.
365 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
366 * distutilsSwigCPlusPlus.py work around some swig portability
368 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
369 * Eventually, python/gdcmPython was renamed to gdcmPython. This
370 was done in a last ditch attempt to get setup.py _really_
371 operationnal. The python/gdcmPython layaout add the advantage
372 of hidding away the python related distutils specific files
373 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
374 Alas, the src directory was out of scope (i.e. it's relative
375 position to setup.py was ../src) which made things impossible to
376 handle (see previous version of python/setup.py). Crossing fingers...
377 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
378 * python/setup.py now works on Un*x. (harder than I thougth)
379 * python/distutilsSwigCPlusPlus.py can now have include files
380 among the list of sources.
382 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
383 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
384 * modifications in MSVC projects
385 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
386 * As stated by the first lines of Test/ExceptionAndPython/README, it
387 looks like we can move back to original usage of exception within
388 src/gdcm* and hence remove the errno stuff that was introduced
389 as a quick and dirty fixture of this problem (added to the TODO).
390 * Doc/Doxyfile configuration file for Doxygen and corresponding
391 README file for usage added.
392 * Test/testWrite.cxx added. This new test comes from a split of
393 test.cxx that is now reverted to its original purpous i.e.
394 testing the proper parsing of a Dicom related file.
395 testWrite.cxx concentrates on testing the IO part of gdcm.
396 * Test/bug1.cxx (containing a bug on WIn32) added.
397 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
398 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
399 whose purpose is to publish the content of the TagNames of the
400 Dicom public dictionnary were not accessible without an
401 instance of class gdcmHeader.
402 - those methods are now static methods of gdcmDictSet and hence
403 require no instances at all to be invocated.
404 - within gdcmDictSet this change required to change some method
405 to class methods (i.e. are now static) among which SetDictPath
406 (renamed to BuildDictPath) and LoadDefaultPubDict.
407 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
408 the above changes by calling the new method classes of gdcmDictSet.
409 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
410 the above to be effective.
411 * python/gdcmPython: in order to wrap properly the above changes
412 for Python, swig version now needs to be > 1.3.17.
413 * python/gdcmPython/Makefile fixed to adapt itself to new
414 configure/make shema introduced by Johan Montagnat (thanks for the
415 contribution). Alas this Makefile cannot be turned into a proper
416 Makefile.am without some heavy changes in the configure.in
417 (for python dectection).
418 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
419 now avoids publishing the empty entries.
420 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
421 * python/setup.py : bug fix concerning install under windows
423 * gdcm.dsw : bug fix concerning path for libraries for python !!!
424 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
425 * Dicts/dicomV3.dic : remove double spaces !!!
426 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
427 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
429 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
430 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
431 method. Doxygenation.
432 * src/gdcm.h clean up of JPR spurious comments.
433 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
434 * python/distutilsSwigCPlusPlus.py now properly collects the
435 shadow classes generated by "swig -c++" (gdcm.py in our case)
436 when using "python setup.py install".
437 * python/gdcmPython/__init__.py imports gdcm.py and only manually
438 reexports the working classes.
439 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
440 by the classical C errno scheme. This is to prevent an obscure
441 behavior of the python wrappers when importing wxPython.wx prior
442 to gdcmPython (which ended up in an abort call). An illustration
443 of this oddity can be found in the Test/ExceptionAndPython
444 subdir (see the README file). This problem probably due to
445 an combination of g++ and dynamic loading.
446 * added Test/ExceptionAndPython (see above)
447 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
448 * Changed the layout of the python part to avoid bloating main
449 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
450 i.e. the distutils arsenal. All the python related stuff is
451 again in a python subdir, but the package itself is now in
453 * setup.py was cleaned up:
454 - pythonIncludePath removed
455 - python setup.py bdist target is now functional.
456 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
457 collision with other packages). gdcmPython/demo/*.py changed
459 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
460 * python subdir moved to gdcmPython (preparation of distutils packaging).
461 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
462 distutils installer is operational.
463 * - gdcmPython/__init__.py now properly loads the swig generated
464 shadow classes (from gdcm.py).
465 - gdcmPython/demo/*.py changed to import the package gdcmPython
466 instead of gdcmPython/demo/load.py.
467 - gdcmPython/testSuite.py changed to import the package gdcmPython.
469 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
470 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
471 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
472 entries within the associated public Dicom dictionary resp. the same
473 information but sorted by the fourth field (PAT, IMG, DIR) of the
475 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
476 are now in the "???" group.
477 - python/gdcm.i changed accordingly,
478 - python/demo/printGroupedPublicDict.py added, that gives an example
479 of the above new functionalities in Python.
480 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
481 * src/gdcm.h, gdcmHeader.cxx:
482 - historic references to glib's g_malloc and g_free (#defined)
483 were definitively removed.
484 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
485 * src/gdcmElValSet.cxx:
486 - GetElement(guint32, guint32) renamed to GetElementByNumber.
487 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
488 - GetElValue(string) renamed to GetElValueByName.
489 - Added GetElementByName(string).
490 * src/gdcmHeader.cxx: added
491 - GetPubElValRepByNumber(guint16, guint16)
492 - GetPubElValRepByName(string)
493 - GetShaElValRepByNumber(guint16, guint16)
494 - GetShaElValRepByName(string)
495 - GetShaElValByNumber(guint16, guint16)
496 - GetShaElValRepByName(string)
497 - GetElValRepByNumber(guint16, guint16)
498 - GetElValRepByName(string)
499 - GetElValByNumber(guint16, guint16)
500 - GetElValRepByName(string)
501 * Doc/requirements.txt added.
502 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
503 * Test/Makefile building now depends on the one of libgdcm.so
504 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
505 pixel data) aware which enables finding the address (offset) of
506 the pixel data of JPEG encoded DICOM files. This leaves only a single
507 file in the testSuite whose pixel data address (offset) is unknown.
508 * python/testSuite.py changed accordingly.
509 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
510 * VC++ has some strong limitations when working with the STL, as stated
511 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
512 "Also note that some STL containers (map, set, queue, list, deque)
513 cannot be exported. [...]
514 Some STL classes contain nested classes. These classes can not
516 This is caused by a designed limitation that once a template
517 class is instantiated, it can not be re-instantiated and
519 Since our usage of map<> is ubiquitous in gdcm, this "designed
520 limitation" of VC++ is a pitfall.
521 Hence the Python wrappers of gdcm cannot be incrementally linked
522 against the c++ dynamic library. The dirty but only workaround is
523 to forget about incremental link of dynamic libraries and to generate
524 the Python wrappers library with the inclusions of the underlying C++
526 The following modifications concern this matter on Win32/VC++:
527 - wrapping python correct with standalone wrapped dll (don't use separate
528 dll under windows !!!!)
529 - python21_d debug mode enabled (ask Frog how to use it :-)
530 - NO problem with having an STL member of class for example string in C++
531 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
532 - Python test of dcmlib in Python is ok under windows on a large set
534 * removed glib references
535 * typedef's inserted in gdcm.i for correct swig type management
536 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
537 * python/demo/*.py load.py extracted from test.py. Added explore.py
538 that only displays required tags and testAll.py that parses all
539 the files of the testsuite without using unittest.
540 * python/testSuite.py other additional test on new files added.
541 * Data/* new test files added accordingly to the testSuite.
542 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
543 the vr in the file differs from the one of the dictionary.
544 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
545 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
546 values, but limits itself to values which are below a user specified
547 size (by default 1024 bytes).
548 * python/gdcm.i : elements not loaded (because their size is above the
549 user specified treshold) are exported with their TagKey as key of the
550 python dictionary. This enables the testsuite to make some checks
551 on the unloaded elements (since we have their offset and size).
552 * python/testSuite.py
553 - now tests for the existence and proper value of the pixel data
554 - two new examples added.
555 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
556 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
557 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
558 aware. See the strategy comments in gdcmHeader::FindeLength().
559 * Test/test.cxx now accepts a filename as first argument.
560 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
561 * python/testSuite.py changed to integrate test on above files.
562 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
563 * Dicts/dicomV3.dic removed all the trailing (RET) when the
565 * python/testSuite.py more tests added.
566 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
567 * python/testSuite.py unittest test suite added (uses Data)
568 * Data/* dcm and acr files for the test suite.
569 * glib dependance removed from un*x version. We now use ISO C99
570 7.18 Integer types (see stdint.h)
571 - python/Makefile, src/Makefile src/gdcm.h
572 * src/ when an explicit vr (like dicom files) suddenly poped an
573 implicit element we use to mark the underlying DictEntry of the
574 concerned ElValue with "Implicit". This strategy was damageable
575 too the public or provite dictionaries, since some of their vr
576 would be changed. Since Header::FindLength heavily relies on the
577 detection by Header::FindVR of falsely explicit elements, I
578 added an extra ImplicitVr member to ElValue (boolean).
579 The rest of the changes we the necessary adaptations.
580 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
581 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
583 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
584 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
585 * Adaptation for porting to VC++:
587 o forced to use std namespace (for string to be known)
588 o all class use __declspec export style on WIN32
589 - src/gdcmUtil.cxx new Exit method that wraps the exit call
590 (in stdlib.h on Win32 but in std:: for gcc)
591 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
592 variable GDCM_DICT_PATH.
593 * src/gdcmHeader.cxx verbose comments made discrete.
594 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
595 * python/gdcm.i: added a typemap that converts a C++ hashing table
596 to native Python dictionary.
597 * python/demo/test.py:
598 - now uses the native dictionary for exploration of gdcmHeader.
599 - takes an optional filename argument (the file to parse).
600 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
601 PubElVals hashing table.
602 * Dicts/dicomV3.dic removed error prone trailing spaces.
603 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
604 * Python wrapping process moved away from src/Makefile to
605 newly created python/Makefile (as well as gdcm.i)
606 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
607 * src/gdcmHeader::FindLength only looks for current vr when necessary.
608 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
609 from the environement variable GDCM_DICT_PATH (when existing).
610 * src/gdcmDict::GetTag bug fix.
611 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
612 * Straightforward temporary fixes for swig to build the python wrappers.
613 src/Makefile now has a python working entry [by working we mean
614 that we can import de shadow classes without errors].
615 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
616 * hashtest.cxx removed (since allready in Test)
617 * src/gdcmlib.h renamed to src/gdcm.h
618 * src/dcm.i renamed to src/gdcm.i
619 * src/Makefile prepared for python wrapping
620 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
621 * src/gdcmHeader.cxx :
622 - Parsing of header is now separated from loading of element values
623 (see gdcmHeader::LoadElements).
624 - general clean up of hopefully all file access (creation of
625 ReadInt16 and ReadInt32)
626 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
627 * src/gdcmHeader.cxx :
628 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
630 - SetLgrElem renamed to SetLength
631 - GetLgrElem renamed to GetLength
632 - ~gdcmHeader() made virtual to pesky warning messages at compile.
633 * src/gdcmElValSet.cxx fixed both GetElValue methods
634 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
635 due to IdoDude was cleaned out.
636 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
637 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
638 concentrates on finding the value representation (when it exists).
639 RecupLgr now only finds the element value length, and it avoids
640 returning the unecessary skL (skipped length).
641 Also, offsetCourant was simply removed (with taille_fich) since
642 it was redundant with the File position internals (by using
643 ftell and fseek). This also made skL (see above in RecupLgr) usage
645 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
646 on the libido specificities which are handled through class
648 * Test/implicit_vr.dcm dicom v3 in implicit value representation
650 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
651 * Truckload of changes. Parsing of header is barely functional
652 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
653 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
654 * src/gdcmHeader.cxx many addons of low level methods
655 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
656 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
658 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
659 * This corresponds to all the changes decided at the meeting of
660 May 23 2002. Needless to say we are running late...