1 2004-06-14 Jean-Pierre Roux
3 - fix the display of Sequence Delimitor (SQDepthLevel pb)
4 - fix the display of SQItem ordinal number
5 - add the GetSQItemByOrdinalNumber method
6 - remove some useless never written private methods
8 2004-06-14 Jean-Pierre Roux
10 - adding a constructor taking a gdcmDocEntry as an input param
11 - ReplaceOrCreateByNumber now returns :
12 a gdcmBinEntry * if a Binary (void *) value is passed as a param
13 a gdcmValEntry * if a string value is passed as a param
15 - SetEntryByNumber now allows setting gdcmValEntry or gdcmBinEntry,
16 according to the param type (no longer sets a gdcmDocEntry)
17 - GetValEntryByNumber, GetBinEntryByNumber added
18 - NewValEntryByNumber and NewBinEntryByNumber added
20 - Pixel Data are now linked to the (7fe0,0010) elements, after reading
22 - GetSQItemNumber and SetSQItemNumber added, to provide
23 a (relative) Item identier inside a given Sequence
24 \warning : some pb remaining around this number
26 - AddEntry now takes the Item Number as a param
28 - adding a constructor taking a gdcmDocEntry as an input param
31 2004-06-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
32 * Memory leak hunt with the following command:
33 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
34 --show-reachable=yes gdcmTests PrintDocument
35 It looks like many (all?) leaks are due to the STL (or a bad usage
36 of the STL. The lines producing the leaks now have a comment with
37 a "MEMORY LEAK" tag: you can retrieve them with
38 grep "MEMORY LEAK" src/*
39 Here are two typical examples which I can't help fixing:
45 name = test; //// <--- valgrind detects 960 bytes lost in
46 //// call to std::string::operator=(char const*)
47 name.clear(); //// Doesn't help !
55 std::cout << "Type a bunch of characters followed by RETURN: ";
56 getline(std::cin, line); //// <--- valgrind dectects a loss
57 //// of 1320 bytes in call to
58 /// std::basic_istream<>& std::getline<>
64 2004-06-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
65 * src/gdcmHeader.[cxx|h]:
66 - Predicates on the Transfer syntax (of the form Is[JPEG|RLE]*)
67 and related, moved away to gdcmDocument.
68 - Accessors (on the form [Get|Set]Entry*) set up to expose publicly
69 the corresponding protected accessors of inherited class
70 gdcmDocument, removed ! As a consequence gdcmFile had to be
71 declared friend of class gdcmDocument (see below).
72 - operator< moved to gdcmDocument (in fact it belongs to gdcmDicomDir).
73 - Clean up of undefined or unused methods.
74 * src/gdcmFile.[cxx|h]: added SetEntryByNumber (in order to take into
75 account the changes to gdcmHeader.h).
77 - gdcmFile is now a friend class (in order to take into account the
78 changes to gdcmHeader.h).
79 - Predicates on the Transfer syntax (of the form Is[JPEG|RLE]*) added
80 (see changes to gdcmHeader.h).
81 - Accessors (reading on the form GetEntry*) are now public.
82 - Clean up of undefined or unused methods.
83 * src/gdcmDocument.cxx:
84 - adaptation to changes to gdcmDocument.h
85 - ::OpenFile now writes a verbose message when file cannot be opened.
86 - some std::string properly set to VRKey
87 * src/gdcmDicomDir.h: historical references to gdcmHeader changed to
88 references to gdcmDocument.
89 * Test/TestFindTags.cxx: changed accordingly to above changes.
90 * gdcmPython/testSuite.py: adapted to renaming of acr files in
91 cvs repository gdcmData.
93 2004-06-09 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
94 * src/gdcmValEntry.h: member voidArea type changed from char* to void*.
95 * src/gdcmBinEntry.h: member voidArea commented out, since it potentially
96 conflicts with gdcmValEntry::voidArea.
97 * src/gdcmValEntry.cxx: unmatching comment wiped out.
98 * src/gdcmVR.[h|cxx]: added two predicates that partition the possible
99 Value representation between StringRepresentable and BinaryRepresentable.
100 * src/gdcmDocument.cxx:
101 - method ParseDES: proper indentation restored and usage of
102 gdcmVR::IsVROfGdcmStringRepresentable wired in.
103 - method LoadDocEntry: the fingerprint left in the SetValue() of
104 unloaded entries (length > MaxSizeLoadEntry) had curiously been
105 removed. Reverting to previous code segment with the proper
106 dynamic_cast< gdcmValEntry* >.
107 Note: this was (partially) breaking the python test suite
108 (gdcmPython/testSuite.py) that made usage of the above
109 fingerprint to check presence of "Pixel Data".
110 * src/gdcmDocEntry.h: coding style.
111 * gdcmPython/__init__.py: environement variable GDCM_DATA_PATH is
112 now taken into account.
113 * gdcmPython/gdcm.i: adaptation to the new internal representation
114 of gdcm (exit gdcmParser, hello gdcmDocument).
115 * gdcmPython/testSuite.py: quick and dirty fix for loading vtkgdcmPython
117 * gdcmPython/demo/PrintHeader.py: doesn't use the gdcmDocument::Print()
118 anymore, but instead prints the loaded Python dictionary.
119 * .... alas, the python testSuite is still broken.
121 2004-05-18 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
122 * gdcmPython/gdcm.i : remove useless lines concerning the gdcmGlobal
124 * gdcmPython/setup.py : replace the use of cvar.gdcmGlob to gdcmGlobal
125 * src/gdcmUtil.h : export methods
127 2004-05-16 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
128 * Some more cleanup/enhancement in gdcmPython/CMakeLists.txt getting close
130 * Initial addition of automatic python testing
131 * Initial addition of automatic image comparison
133 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
134 * src/gdcmCommon.h, gdcmDicomDir.cxx, gdcmFile.cxx, gdcmHeaderHelper.h,
135 gdcmParser.cxx, gdcmParser.h : bug fix for the Microsoft .Net compilation
137 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
138 * src/gdcmFile.cxx, gdcmHeader.cxx : bug fix for the msvc compilation
139 * Test/ShowDicom.cxx : bug fix for msvc compilation
140 * vtk/vtkgdcmViewer.cxx : bug fix for msvc compilation
142 2004-05-04 Jean-Pierre Roux
143 * ADD Taking into account the 'Dicom Sequences' leads up to introduce
144 new concepts (and new classes) :
145 a 'gdcmDocument' is composed of a set of Doc Entries, that are
146 - elementary gdcmDocEntries (former gdcmHeaderEntries)
147 - Sequence Doc Entries (gdcmSeqEntries)
148 a Sequence is composed of Items.
149 Each item is a set of Doc Entries (this is recursive)
150 The non uniqueness of the 'Dicom tag' is due to this recursivity
151 (never taken into account)
152 Our unability to add a new 'entry' in the header
153 at the proper location (neither in the H-Table (map or multimap),
154 nor in the Chained List is also due to this recursivity.
155 Don't try, right now, to use/modify/compile these new sources :
157 We just commit all the stuff, 'as is', in order not to loose it.
159 2004-05-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
160 * vtk/vtkGdcmReader.cxx : bug fix in the setting of file name
162 2004-05-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
163 * vtk/vtkGdcmReader.cxx : bug fix when loading a list of files using the
164 file prefix (SetFilePrefix)
166 2004-05-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
167 * Add a new test: ShowDicom, for now this is just the c++ version of
168 checkRead.sh, later it will be able to compare the image read against a
170 * Replace the DEBUG on the stack with a global entry in cmake interface:
171 GDCM_DEBUG, so you can turn verbosity ON/OFF for debug statement.
173 2004-04-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
174 * Add an example subdir, with a real example on how to read + write a
177 2004-04-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
178 * Doc/gdcmUML.xmi added raw UML class view (umbrello format)
179 * Doc/CMakeLists.txt: the main page is now properly differentiated
180 between the developper and user version.
181 * Doc/doxygen.config.in: dropped search related obsolete flags
182 * src/gdcmParser.h, gdcmHeader.h: doxygenation
184 2004-04-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
185 * DEVELOPPER: added some helpfull comments for compile/test/install
188 2004-04-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
189 * ENH: 1. Remove remp solution of gdcmTests.cxx+ gdcmMain directly in
190 src directory, now generated in the build dir.
191 2. Tests as mentionned smarter
193 4. Add a new method in gdcmDict that return the PubDict by name
194 this is interesting for 3rd party lib like ITK,
195 where we could set the institution name / patient name...
197 * ENH: 1. Now the test suite is working for real
198 2. All binaries are now output in the gdcm-bin directory
199 (this was not true before)
201 2004-04-28 Jean-Pierre Roux
202 * ENH add the provisional gdcmHeader::SQDepthLevel to allow
203 SeQuence indented printing of Dicom Header.
204 * ENH merge methods gdcmParser::Parse and gdcmParser::LoadHeaderEntries
205 into the single gdcmParser::LoadHeaderEntries for efficiency purpose.
206 Computation of SQDepthLevel is now part of gdcmHeader constructor
207 * ENH add self defined param 'new' to PrintHeader to 'show' the SeQuence
208 tree-like structure of a Dicom Header.
209 * FIX Test code cleaning
211 2004-04-25 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
212 * ENH: Adding automatic testing
213 1. Need a DartConfig.cmake to submit to public
214 2. Add a test driver gdcmTest.cxx
215 3. gdcmTestMain, an helper for the main test driver gdcmTest
216 4. Files in Test don't have a main anymore, this becomes interesting
217 when we add more and more tests, thus dsw don't have to load
219 * ENH: Adding a GDCM_DATA_ROOT for testing
220 * ENH: Remove redundancie about GDCM_DICT stuff, now we only need to modify
221 one file instead of seven + some small cleanup
223 2004-04-22 Jean-Pierre Roux
224 * ENH Minor changes to the Print() methods.
225 * ADD gdcmParser::PrintEntryNiceSQ() to allow SQ-indented
226 Header printing. Example given with :
227 > PrintHeader fileName 2 new
228 (SQ based tree-like structure still to be done for the Header ...)
230 2004-04-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
231 * ENH: Some cosmetic clean up for compilation with -W -Wall -Werror
232 1. I have added some unsigned where needed
233 2. Some function parameter not used -> (void)
234 3. In gdcmDicomDir.cxx, add GDCM_DICOMDIR_NONE case
235 4. g++ don't like character '\' in comment
236 5. #define jpeg_create_decompress jCreaDecompress
237 this really need to be fixed
238 6. virtualize destructor of gdcmObject ... leakage
239 7. sscanf(g->first.c_str(),"%x",&gr_bid);
240 this also really need to be fixed
241 8. gdcm/src/jpeg/libijg8/CMakeLists.txt,
242 remove compression file
243 (as we only do decompression, right ?)
244 * ENH: Change malloc/calloc/free with c++ equivalent
246 2004-04-21 Jean-Pierre Roux
247 * FIX gdcmHeaderHelper::GetXSpacing
248 when a single value is found (bug ?), xpacing is now
249 defaulted to yspacing
251 2004-04-19 Jean-Pierre Roux
252 * ADD gdcmData/Wrist.pap (PAPYRUS 3.0 -single frame-) for checking purpose
253 * ENH add parameters :
254 bool exception_on_error = false,
255 bool enable_sequences = false,
256 bool ignore_shadow = false
257 to the gdcmFile constructors to be full gdcmParser compliant
258 * FIX vtk/vtkGdcmReader.cxx now uses enable_sequences = true in gdcmFile
259 to allow reading of PAPYRUS 3.0 files
261 2004-04-06 Jean-Pierre Roux
262 * ADD gdcmData/E00001S03I0015.dcm for SQ checking purpose
264 2004-04-02 Jean-Pierre Roux
265 * ADD : Test/checksequence.sh, for a general recap on SQ pb
266 * FIX : gdcmParser::WriteEntryTagVRLength emprovement of special treatement
267 for Philips spurious Tag fffe|0000 while rewritting Dicom files
269 2004-03-30 Jean-Pierre Roux
270 * FIX gdcmParser::ReplaceOrCreateByNumber shouldn't seg fault any more
271 for ACR file, written out as DICOM files (hope so...)
273 2004-03-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
274 * src/gdcmParser.[cxx|h] and gdcmHeader.[cxx.h]: gdcmHeader::Write split
275 in WriteEntryTagVRLength and WriteEntryValue. Those methods were
276 moved to base class gdcmParser and only the specialisation is kept
278 * src/gdcmParser.[cxx|h]: ReplaceOrCreateByNumber(char*, guint16, guint16)
279 trashed out (because ReplaceOrCreateByNumber(string, guint16, guint16)
280 already does the job.
281 * src/gdcmDicomDir.[cxx|h]: WriteDicomDirEntries renamed to WriteEntries
282 (to be consistent with gdcmParser::WriteEntries).
284 2004-03-30 Benoit Regrain
285 * vtk/vtkGdcmReader.[h|cxx] : fix the read of 3 gdcmHeader when making an
286 upate of the object's instance. It's passed to 2 in the unfavorable
287 case : one in the ExecuteInformation, one in the ExecuteData
289 2004-03-29 Jean-Pierre Roux
290 * ENH : Check on file type to be written moved
291 from gdcmParser::WriteEntry to gdcmParser::WriteEntries
292 * FIX : gdcmObject::ResetBoundaries now stops properly
293 when end-of-list is reached
294 : gdcmVersion modified (as Benoit Regrain asked)
296 2004-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
297 * src/gdcmParser.cxx: removal of all TAB character. Indentation fixed.
298 * src/gdcmUtil.cxx: added forgotten iostream include.
299 * src/gdcmCommon.h: FileType enum entry DICOMDIR removed (since
300 equivalent to ExplicitVR in existing code).
302 2004-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
303 * src/gdcmUtil.[cxx|h] split in two. Additional file gdcmGlobal.[cxx|h]
304 now contains all the gdcmGlobal related code.
305 * minor coding style and doxygenation changes.
307 2004-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
308 * src/gdcmUtil.[cxx|h] split in two. Additional file gdcmDebug.[cxx|h]
309 now contains all the Debug related code.
310 * minor clean-up of includes in src/*.cxx
311 * src/gdcmUtil.[cxx|h] _cleanString C style function (replaced with
312 CreateCleanString) removed.
313 * src/gdcmUtil.[cxx|h] _CreateCleanString renamed to CreateCleanString
314 * Doc/DoxyMainPageUser.txt added.
315 * Doc/Doc/DoxyfileUsers updated to version 1.3.4 of Doxygen.
316 * src/gdcmCommon.h now defines getcwd for Win32 (moved away from
319 2004-03-24 Jean-Pierre Roux
320 * FIX a lot of little surface modifications to be doxygen 1.3.6 compliant
322 2004-03-23 Jean-Pierre Roux
323 * FIX Now gdcmFile::SwapZone doesn't seg faults any longer for
324 big endian made volumes
325 * ENH Now gdcmParser constructor and destructor are protected to forbid
326 end user to instanciate class gdcmParser
327 (only gdcmHeader and gdcmDicomDir are meaningfull)
329 2004-03-22 Benoit Regrain
330 * FIX : src/gdcmDicomDir.cxx : make windows compilable
331 * FIX : gdcmPython/gdcm.i : change gdcmStudy to gdcmDicomDirStudy and
332 gdcmSerie to gdcmDicomDirSerie
334 2004-03-19 Jean-Pierre Roux
335 * ENH Now the tree-like structure describing a DICOMDIR comming from
336 an already existing DICOMDIR file is consistent with
337 the home-made tree-like structure build ex-nihilo
338 or build from the files held (recursively) in a Directory
339 functions gdcmDicomDir::CheckBoundaries()
340 gdcmObject::SetBoundaries() added
342 2004-03-17 Jean-Pierre Roux
343 * REM (Eric Boix bug) : removal of meaningless
344 gdcmDicomDirImage::NewImage function.
345 * FIX now file names and directory name are written properly in the
347 * FIX now gdcmDicomDir constructor may be call without any trick
350 2004-03-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
351 * FIX (JPR bug) : src/gdcmDicomDirImage.cxx added missing definition
352 of gdcmDicomDirImage::NewImage as empty function.
354 2004-02-28 Jean-Pierre Roux
355 * ENH add gdcmDicomDir:NewPatient
356 add gdcmDicomDirPatient:NewStudy
357 add gdcmDicomDirStudy:NewSerie
358 add gdcmDicomDirSerie:NewImage
359 to allow making gdcDicomDir object.
360 * ADD PrintDicomDir executable that uses gdcmDicomDir tree-like structure
361 (as opposite to the gdcmHeader chained list)
363 2004-02-11 Benoit Regrain
364 * FIX : memory leaks and the set of ArgDelete methods in gdcmDicomDir
365 when using from python
367 2004-02-10 Benoit Regrain
368 * FIX : bug fix in the gdcmDirList for the recursivity in directories
369 * FIX : in gdcmDicomDir when the directory is empty
370 * ENH : add callback and methods to get the progression of dicomDir
373 2004-02-06 Jean-Pierre Roux
374 * ENH : - now gdcmDicomDir::CreateDicomDir() returns also the meta elements
375 - GDCM_META added to gdcmDicomDirType
376 - class gdcmMeta created
377 * ENH : - A brief summary is now displayed at the beginning of
378 'testDicomDir' to help disaster magnitude estimation
379 * REM : Now useless Test/explDICOMDIR.cxx
381 2004-02-05 Benoit Regrain
382 * ENH : add methods in gdcmObject to get the hash table or the list of
384 * FIX : wrapping python for ListPatient, ListStudy, ListSerie, ListImage
385 * FIX : wrapping python for TagHeaderEntryHT
387 2004-02-04 Benoit Regrain
388 * FIX : even length for some strings when writting the dicom dir
389 * FIX : sort the images in the dicom dir
390 * FIX : Bug fix for python use of dicom dir
391 * ADD : a python demo
393 2004-02-04 Jean-Pierre Roux
394 * FIX : Final solution (?) for icone embedded images
395 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
396 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
397 add groups 6002, 6004, 6006, to allow 'clean' parsing of
398 gdcmData/gdcm-MR-SIEMENS-16.acr1
399 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
400 to make full checking easier
402 2004-02-04 Benoit Regrain
403 * FIX : WriteEntries : coding style & logic in parameters
404 * FIX : Set the elements to create the DicomDir in a dictionary file
406 2004-02-03 Benoit Regrain
407 * gdcmDirList : to parse a hard drive directory in recursive (or not)
408 * gdcmDicomDir : add the load of directory
409 * Bug fix and print add-on
411 2004-02-03 Jean-Pierre Roux
412 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
413 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
414 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
415 * FIX gdcmParser.cxx : 'group length' elements are now considered
416 as integers, even for shadow groups, when file is Implicit VR
418 2004-02-02 Jean-Pierre Roux
419 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
421 of the last synonym :-(
422 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
424 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
425 * FIX taking into account the possible 7fe0,0010 multiplicity
426 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
427 to allow removal of references to 7fe0,0010, to deal with
428 ACR-NEMA images, when 0028,0200 is meaningfull
430 2004-01-31 Jean-Pierre Roux
431 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
432 no longer writes 'Un' on disk
433 * FIX SQ elements with actual length are now dealt with corectly
434 * FIX gdcmFile::WriteBase make the difference, for color images, between
435 the length (for Palette expanded images)
436 and Raw Length (non expanded image + Palette)
437 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
438 (that broke Write). Replaced by UL.
439 Aware user will reload the field if he
440 thinks it's necesssary
442 2004-01-30 Jean-Pierre Roux
443 * gdcmParser::CheckSwap() now defaults the filetype to ACR
444 when 'dirty Acr' is found, to be compliant with the new
445 IsReadable() methods.
447 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
448 (no DOUBLE images in kosher DICOM,
449 but so usefull for people that miss them ;-)
451 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
452 DICOMDIR related utilities (not checked as Windoze compliant)
454 2004-01-28 Jean-Pierre Roux
455 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
457 2004-01-27 Jean-Pierre Roux
458 * gdcmParser constructor has a new boolean param,'ignore_shadow',
459 to allow skipping the shadow elements, to save memory space.
460 The TRUE value for this param has to be used
461 with a FALSE value for the 'enable_sequence' param.
462 ('public elements' may be embedded in 'shadow Sequences')
463 * gdcmHeader methods now deal with 'embedded icones images' in the header
464 (even when an 'icone image sequence' is announced by the
465 element (0x0088,0x0200), but there is NO icone at all ...
467 * gdcmHeader sometimes Image Location value doesn't follow
468 the supposed processor endianity (see gdcmData/cr172241.dcm).
471 * gdcmHeader add the method
472 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
473 to get *all* the Header Entries with the same tag.
474 GetHeaderEntrySameName is probabely *useless*
475 (no meaning : Name is *not* an identifier within the Dictionnary)
477 2004-01-26 Benoit Regrain
478 * Bug fix in the print of hexadecimal representations. Remove long fields
479 in the print and add a third level of print to print them
481 2004-01-23 Benoit Regrain
482 * Bug fix on field having a VR = 'UI'. Assume that is a string field
483 * Bug fix on test suite after remove the strip made on not string fields
484 * Split the IsReadable method between gdcmParser which test that the file
485 is dicom and gdcmHeader which test that it's an image file
487 2004-01-22 Benoit Regrain
488 * DicomDir : clean code, add methods, set variables in protected or private
489 * gdcmUtil : bug fix for the clean string method
491 2004-01-19 Benoit Regrain
492 * Add the use of shadow dictionaries
493 * bug fix and coding style
495 2004-01-19 Benoit Regrain
496 * src/gdcmFile.cxx : bug fix concerning the close of file
497 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
498 * Add the update of header entries using the shadow library
500 2004-01-19 Benoit Regrain
501 * removal of file gdcmHeader2.cxx
502 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
503 inheriting from gdcmParser. This split is to prepare the integration
505 * bug fix under python
507 2004-01-16 Jean-Pierre Roux
508 * REM removal of class gdcmHeaderEntrySet
509 * REM removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
510 * ADD add file gdcmHeader2.cxx
511 * ADD add method gdcmHeader::SetPrintLevel (for PrintHeader)
513 2004-01-15 Benoit Regrain
514 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
515 entries created while parsing the header. Thus, they will be destroyed
516 when the gdcmDictSet will be destroyed
517 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
520 2004-01-15 Benoit Regrain
521 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
522 made a fatal error because of the memory release at the end of program.
523 The problem was in vtkGdcmReader::ExecuteData where we were allocate
524 some memory and vtk seems to have some problems with that.
525 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
527 2004-01-14 Benoit Regrain
528 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
529 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
530 * src/*.[h|cxx] : make changes due to class name changes
531 * gdcmPython/demo/*.py : bug fix due to method names
533 2004-01-13 Benoit Regrain
534 * src/*.[h|cxx] : coding style
535 * vtk/*.[h|cxx] : coding style
537 2004-01-13 Benoit Regrain
538 * gdcmPython/testSuite.py : test the readable flag of file for tests
539 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
540 It's lied to the stl compilation by MSVC (windows, always windows...)
541 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
543 2004-01-12 Benoit Regrain
544 * src/*.h : add comments
545 * src/gdcmDictSet.h : set the method BuildDictPath in public
546 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
547 directly setted in the source code
548 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
551 2004-01-09 Benoit Regrain
552 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
553 * setup.py : use a reference to gdcmVERSION
555 2004-01-07 Benoit Regrain
556 * Modification to compile with the distutils.
559 2003-12-10 Benoit Regrain
560 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
561 can use a gdcmHeaderHelper to load datas
562 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
563 made in the source code
565 2003-12-10 Benoit Regrain
566 * Update Windows projects and .cvsignore files
568 2003-11-12 Jean-Pierre Roux
569 * ENH gdcmHeader constructor has one more parameter (default value : false)
570 that allows the user to 'go inside' the SeQuences only
572 gdcmElValSet:Print takes it into account
574 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
575 * ENH: Update gdcmPython/CMakeLists
576 * FIX: (gdcmHeaderHelper) GetRescale and GetSlope
577 * FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
579 2003-11-10 Jean-Pierre Roux
580 * FIX : gdcmHeader::LoadElements is now based
581 on the ListTag listElem member,
582 not longer on the TagElValueHT tagHt member
583 * ENH : PrintPubElVal shows (temporarily) both results,
584 with the tagHt member and the listElem member.
585 (it's easier to 'see' the problems when using Printheader)
587 * FIX : old private member LgrElem is now splitted into
588 ReadLength : Length actually found on disk (updated only
589 if bug fixing is necessary), for internal
591 UsableLength : Updated by FixFoundLength, to fix a bug
592 or to allow Parser going on.
593 Will allow to re-write a kosher header when a SeQuence
594 with a length (not 0000) is found
595 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
596 because gdcmElValSet::Add does not update ListElem
599 2003-11-07 Jean-Pierre Roux
600 * FIX misstyping in Transfert Syntax name table
601 * ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
602 when they have an actual length (not 0000 nor FFFFF)
603 (Nobody should care of it, but DICOMDIR explorers)
605 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
606 * ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
608 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
609 * ENH: vtkGdcmReader now supports LUT !
610 (vtkgdcmViewer for now is not able to use them though)
612 2003-11-05 Jean-Pierre Roux
613 * in testSuite.py : new files names for checking the package
614 * FIX : Forgot to commit gdcmFile::GetImageDataSizeRaw();
615 that returns the pixel area size to the *aware* (vtk) user
616 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
618 2003-11-05 Benoit Regrain
619 * in testSuite.py : Modify the rules for checking the paths
620 : Explicit error messages
621 * in __init__.py : Related modif
623 2003-11-03 Jean-Pierre Roux
624 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
625 to be used by aware (vtk) users that want to manage
626 LUT (and no to turn the PALETTE image into an RGB pixels one)
627 * GetPixelType now returns 8U for 24 Bits images
628 (vtkGdcmReader compliant)
630 2003-10-31 Jean-Pierre Roux
631 * Removal of *all* gdcmData images and add them again
632 in order to loose the 'history' of un-anonymised images
634 2003-10-31 Jean-Pierre Roux
635 * RMV : removal of useless jBitsInJsample.h
636 for both 8 and 12 Bits JPEG Lossy Libraries
638 2003-10-31 Jean-Pierre Roux
639 * ENH : Add the functions gdcmFile::GetImageDataRaw
640 gdcmFile::GetImageDataIntoVectorRaw
641 that act as GetImageData and GetImageDataIntoVector
642 except the making of an RGB Plane from Gray Plane + LUT
643 Intended to aware (vtk) users who know how to manage
646 GetLUTRGBA return a R,G,B,A LUT if any
647 lgrTotaleRaw gives the 'Raw' length
648 GetImageDataRaw returns the gray Plane
649 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
650 (They stay Grey, just like with other Dicom viewers :-(
652 2003-10-30 Jean-Pierre Roux
653 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
655 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
656 * ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
657 being coherents dicom files.
659 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
660 * FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
662 * ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
663 * ENH: Two steps is necessary to please VC++ compiler...
664 * FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
665 * ENH: Add include dir to medcon lib
666 * FIX: only one function is being exported for now !
667 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
669 2003-10-29 Jean-Pierre Roux
670 * adding gdcmHeader::GetLUTRGBA
671 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
672 --> Mathieu, the modif u're waiting for is not yet committed
673 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
675 2003-10-27 Jean-Pierre Roux
676 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
677 00191113.dcm DermaColorLossLess.dcm
678 MxTwinLossLess.dcm RadBWLossLess.dcm
679 * ENH: For version prior to vtkImageViewer2 -r 1.19
680 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
682 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
683 * Removal of ido stuff in CMakeLists.txt
685 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
686 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
687 * FIX: remove a call to ->Modified ... see comments
688 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooow !
690 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
691 * FIX: Problem with path for libvtkgdcmPython
692 * ENH: Try adding a search script for python site-package
693 * RMV: Remove some file from medcon lib that are not necessary
694 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
695 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
696 * FIX: More pragma disable fro VC++,
697 I don't think I break something as it is also disable in VTK/ITK.
698 But it fasten debug compilation time.
700 2003-10-23 Jean-Pierre Roux
701 * gdcm now deals with 16 Bits Run Length Encoded images
702 (they are compressed as 2 planes images,
703 one for the high Bytes, the other for low Bytes)
705 2003-10-22 Jean-Pierre Roux
706 * Now CheckRead takes into account :
707 - the bugged 'Leonardo' Siemens images
708 - the XA images, sent thru the burning VPRO station
709 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
712 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
713 * FIX: When copying a Makefile.am to CMakeLists.txt
714 one should remove the '\'
716 2003-10-22 Jean-Pierre Roux
717 * in gdcmData adding a bugged 'Leonardo' Siemens image
718 (wrong lengths in header)
719 OK with gdcm, KO with the other viewers :-)
720 * add a GE dlx XA image, thru the VEPRO burning station
723 2003-10-21 Jean-Pierre Roux
724 * in gdcmData add the checkvtkgdcmViewer.sh shell script
725 for a brutal checking of vtkgdcmViewer compliance
727 2003-10-21 Jean-Pierre Roux
728 * add the files for 'xmedcon' Jpeg Lossless library
729 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
731 2003-10-21 Jean-Pierre Roux
732 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
734 2003-10-21 Jean-Pierre Roux
735 * garbage Siemens 'Leonardo' images dealt with
736 (the patch is easy to remove)
737 * cosmetic changes to avoid warnings
739 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
740 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
741 no need to press 'r' now.
743 2003-10-20 Jean-Pierre Roux
744 * upgrade of checkRead.sh checkWrite.sh according
745 to new Jpeg Lossless decompressor
746 * add US.3405.1.dcm, a genuine RGB medical file ...
747 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
748 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
750 2003-10-15 Jean-Pierre Roux
751 * general anonymisation in gdcmData
752 * adding the 'color files' from
753 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
754 * adding some well knowed bugged-header images
755 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
756 waiting for their inclusion in Python testsuite
758 2003-10-15 Jean-Pierre Roux
759 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
760 no longer seg faults when file is not found
762 2003-10-14 Jean-Pierre Roux
763 * Emprovement of reading for Dicom encapsulated Jpeg LossLess
766 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
767 * TODO: *.in file to genereate a UseGDCM later
769 2003-10-14 Jean-Pierre Roux
770 * Some supposed-to-be Dicom Images have no preamble.
771 OpenFile takes it into account
772 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
773 * Missing elements added in dicomV3.dic
774 (just to be affraid : have a look at
775 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
776 and do it again next year ;->
778 2003-10-13 Jean-Pierre Roux
779 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
780 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
781 But there are NOT. It's fixed !
783 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
784 * FIX: "jpeglib.h" was not found on VC++
785 * FIX: vtkgdcm was not being installed
787 2003-10-10 Jean-Pierre Roux
788 * ENH : OpenFile closes the file if it *really* doesn't look like
789 an ACR-NEMA / DICOM one.
790 * FIX : testWrite no longer writes an empty file if the source file
792 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
795 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
796 * FIX: CMake generate now documentation
797 * ENH: out of source doc build !
798 * ENH: Generate both user and dev documentation
799 * ENH: Should work on windows too
800 * ENH: Only one doxygen config.in file is needed
801 * FIX: make install should be ok now on ùnix plateform
802 * FIX: PATH to dictionary was wrong (missing /)
803 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
805 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
806 * vtkGdcmReader is now able to read rgb dicom file.
807 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
808 * added a gdcmViewer to vtk test, use mouse to control
809 window level & window width
811 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
812 * CMake-ification of gdcm, we have now two build system
813 * FIX: on cygwin Wsock32 doesn't exist
814 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
816 2003-10-06 Emanuel Ollart
817 * FIX : compilation process wad broken.
818 Changed gdcmViewer_sources to vtkgdcmViewer_sources
820 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
821 * change gdcmViewer -> vtkgdcmViewer
822 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
824 2003-10-06 Jean-Pierre Roux
825 * FIX :A few nasty patches to allow the reading of a lot of nasty images
826 ( e.g : well known GE images with a wrong elem length,
827 : Philips MRI Images with a wrong Huffman table)
828 * still to be done : allow the reading of bugged LEONARDO Siemens images
830 2003-10-03 Jean-Pierre Roux
831 * Odd length strings are padded with '\0' (not with spaces,
832 to remain compliant with already defined strings,
833 like Transfert Syntax UID and others)
835 2003-10-03 Jean-Pierre Roux
836 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
837 to allow displaying RGB images (not only by affim ;-)
839 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
840 * vtkGdcmReader is now able to read rgb dicom file.
841 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
843 2003-10-03 Jean-Pierre Roux
844 * A few nasty patches to allow the reading of a lot of nasty images
845 ( e.g : well known GE images with a wrong elem length,
846 : Philips MRI Images with a wrong Huffman table)
847 * still to be done : allow the reading of bugged LEONARDO Siemens images
849 2003-10-03 Jean-Pierre Roux
850 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
852 2003-10-03 Jean-Pierre Roux
853 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
854 to allow displaying RGB images (not only by affim ;-)
856 2003-10-03 Jean-Pierre Roux
857 * gdcmFile::GetImageDataIntoVector now
858 - deals with MultiFrames MultiFragments Run Length Encoded files
859 - deals with YcBcR (YBR_FULL) files
860 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
861 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT,
865 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
866 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
867 Two reasons: - clear things
868 - third parties acces gdcm through header files, so won't
869 suffer anymore VC++ complains
871 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
872 * add argv[1] in testvtkGdcmReader.cxx
875 2003-09-24 Jean-Pierre Roux
876 * The lines are now eigthy characters long.for
877 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
879 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
880 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
881 char* to std::string. Thus, the use of strdup becomes useless. (see
882 previous commis of Malaterre)
883 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
884 before the last Malaterre's commit.
886 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
887 * This commit should fix the Debug building under VC++, the problem
888 was mainly a mixture of debug and release lib being loaded at startup.
889 * I also remove a depency to a specific C function: strdup. Because I had
890 to force the link to msvcrtd (whereas strdup is in libc).
892 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
893 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
894 located in the gdcmCommon.h file. All use of reference of tha has been
895 changed to now use the variable GDCM_UNFOUND.
897 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
899 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
900 Dicom dictionary. The test suite can now be run again. Note:
901 I'm note very happy with the " (RET)" changes. I believe this
902 RETAINED comment should be dropped when parsing the dictionary.
905 - AUTHORS updated and now in alphabetical order
906 * Makefile.am now exports gdcm.dsw for Windoze users.
908 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
909 * cygwin complains about missing std:: in subdir Test/
911 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
912 * remove some methods that are now in gdcmHeaderHelper
914 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
915 * vtkGdcmReader set spacing and origin correctly
917 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
918 * Fix a few delete/delete[] mismatch
920 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
921 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
922 interpretation to data given by gdcmHeader. For instance there are
923 heuristics to get informations (look at different places).
924 * it also include a specific class: gdcmSerieHeaderHelper devoted to
925 sorting DICOM images based on different strategies.
926 * modified Makefiles accordingly.
928 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
929 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
930 when building in debug mode
931 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
932 src/win32/gdcmdll.dsp
933 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
935 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
936 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks
939 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
940 * src/win32/libgdcmjpeg12.dsp was not dos format
941 * src/win32/libgdcmjpeg12.dsp :
942 libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
943 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
945 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
946 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
948 * src/gdcmFile.cxx : bug fix in affectation type
949 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
950 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
951 * Modifs of MVSC projects to compile them. Not concerning 2 identic
952 symbols... future problem ?
954 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
955 * src/win32/libgdcmijpeg12.dsp was missing
956 * modified gdcm.dsw accordingly
958 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
959 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
961 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
962 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
963 commit of JPR (before his hollidays to facilitate our work).
964 * setup.py : bug fix in code. Modifications made while the last commit
965 of JPR. The code hasn't been tested before the commit... it's so
966 useless to make that (for best programmer that is JPR) !!!
968 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
969 * tagged the current version as Version0_3 (i.e. version 0.3)
971 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
972 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
973 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
974 * *.dsp : modifications to use new libgdcmijpeg8 library
975 * setup.py : bug fix on VTKPATH variable
976 * PACKAGER : adding all concerning windows
978 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
979 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
981 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
982 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
983 test suite reported error.
984 * PACKAGER file added (describes what a packager must do when
985 packaging a new release).
986 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
987 * configure.in: upgraded version number to 0.3.0
988 * fixing build of rpm (through rpm -ta):
989 - Doc/Makefile.am exports proper doxygen files
990 - src/jpeg/libijg8/Makefile.am exports the include files.
992 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
993 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
994 * src/gdcmHeader.h : formatting code
996 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
997 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
998 We were obtaining error message from vtk. Now, creation of file list
999 is made in an internal list to prevent this problem.
1000 Bug fix when output is empty.
1001 Bug fix in update of progress value. Previous commit for this was a bad
1003 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
1005 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1006 * src/gdcmHeader.h : added method to get the file name
1007 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
1008 files. Added method to remove all files on the input
1009 Added FIXME comment concerning the bad parsing of header made by
1010 ExecuteInformation method (in ExecuteData method)
1012 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1013 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
1014 when using make instal.
1015 * src/gdcmFile.cxx : bug fix under Window after JPR commit
1016 RQ : the JPR doesn't appear in the ChangeLog... normal for him
1018 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1019 * setup.py : adding include dir of jpeg lib to compile all sources
1020 * */Win32/*.dsp : JPR fix for windows compilation
1022 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1023 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
1025 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
1026 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
1028 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1029 * setup.py is again effective on un*x (takes into account the
1030 addon of the jpeg library)
1031 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
1032 * Doc/Doxy* updated (includes above enhancements)
1033 * INSTALL now points to web documentation
1035 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1036 * src/gdcmHeader.h doesn't make unnecessary reference to
1038 * gdcmPython/Makefile.am now avoids calling the wrappers for the
1040 * src/gdcm*.[cxx|h] :
1041 - to allow compilation with gcc 3.x
1042 -- clean up of STL usage (added explicit usage of std::)
1043 -- small fixes on exceptions.
1044 Note: linking not tested !
1045 - clean of doxygen comments to avoid warnings at documentation
1047 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
1048 dependent convertion).
1050 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1051 * Clean up of previous JPR garbage commit (not even commented in the
1053 - Test/Makefile.am removed the reference to unexisting testTS.cxx
1054 - moved all jpeg related files from src to src/jpeg/libijg8, with
1055 addition/modification of Makefile.am and configure.in.
1056 - the testSuite is still brain damage (not guilty).
1058 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1059 * WrapVTK.py : modifications to get correctly vtk source files to
1061 * vtk/vtkGdcmReader.cxx : modification for an already existing name
1062 (FileName -> Filename)
1064 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1065 * vtk/vtkGdcmReader.[cxx/h]:
1066 - UpdateProgress method should now be effective
1067 - removed the limitation on having only images loaded (as opposed
1069 - when building a stack of images/volume, a lesser number of
1070 gdcmHeader and gdcmFile instances should be used (hopefully
1071 accelerating things).
1072 - when building a stack of images/volumes, files which are not
1073 loadable (wrong path-filename, wrong permissions on existing file,
1074 or file not parsable by gdcm) are replaced with a black image
1075 in the stack (for the caller to notice the problem).
1077 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1078 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
1080 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1081 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
1082 between standard library (std) and vtk library (problems are found
1083 under Windows... thanks Windows !)
1085 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1086 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
1088 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
1090 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1091 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
1093 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1094 * When compiling with distutils (see setup.py) the C++ compiler is
1095 called with different flags than the default ones (with automake).
1096 In order to fix all those warning, I compiled gdcm with the command
1097 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
1098 and went for warning fixes:
1099 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
1100 up from unused variables.
1101 - vtk/vtkGdcmReader.cxx: potential bug fix.
1102 * src/gdcmHeader.h: Doxygen warning cleanup
1104 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1105 * gdcmPython/gdcm.i:
1106 - typemaps correction to take into account the systematic replacement
1107 of "using namespace std" with std:: prefix e.g. std::list,
1108 std::string... (cf changes of 2003-05-21).
1109 - gdcmGlob global variable of type gdcmGlobal (defined in
1110 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
1111 exported to Python a as cvar.
1112 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
1113 and GetPubDictTagNamesByCategory() as a replacement for deprecated
1114 gdcmDictSet.GetPubDictTagNames() and
1115 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
1116 C++ static methods).
1117 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
1118 with the above changes.
1120 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1121 * setup.py, manifest.in : bug fix under linux
1123 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1124 * Modification of setup.py to compile vtk part too. Then, we have 2
1125 wrappers which must work with same distutils. For that, we have a
1126 generic distutils in distusiltsWrapping.py ; with :
1127 - build_extWrap class to wrap generically all extensions,
1128 - ExtensionWrap base class for all wrapping extension that contains
1130 - Wrapper interface which wrap sources
1131 + In WrapSwig.py we have extension and wrapper for Swig
1132 + In WrapVTK.py we have extension and wrapper for VTK
1133 * MANIFEST.in : modifications to consider vtk directory and new python
1134 files for compilation
1136 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
1137 * Added python wrappers of vtkGdcmReader vtk class (see the
1138 source in vtk/vtkGdcmReader.cxx) :
1139 - vtk/Makefile.am now builds a library
1140 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
1141 python library (as opposed to _gdcm.so wich are the python
1142 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
1143 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
1145 - configure.in has an additional flag --enable-vtk that needs
1146 to be set to enable compilation of vtk related code, that is:
1147 + vtk/vtkGdcmReader.so and
1148 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
1149 + gdcmPython/vtkgdcmPython.so (see above)
1150 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
1151 be read when compressed or when HighBit + 1 != BitsStored),
1152 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
1153 the usage of the python wrapper of vtkGdcmReader vtk class.
1154 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
1155 * src/*.[h] all occurences of stl classes are now prefixed with
1156 std::, and all occurences of "using namespace std;" where removed.
1157 This is to avoid pollution of global namespace in included files.
1158 Apparently vtk does not avoid this pitfall: when using both
1159 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
1160 collision of various stl members (principally cout...).
1161 * gdcmPython/testSuite.py now cleanly removes temprory generated
1163 * gdcmPython/gdcm.i now declares a typemap for std::string (to
1164 comply with above changes)
1166 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1167 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
1168 * vtk/vtkGdcmReader.cxx now properly inports the image in the
1169 vtk data structure (an image Flip was required).
1170 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
1171 * cosmetic changes in documentation.
1173 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1174 * src/gdcmHeader.cxx: the constructor no longer exits when an
1175 unexisting file is given as argument.
1176 * The subdirectory Data (containing all the images used for the
1177 test suite) is not part of this repository anymore. A new module
1178 containing those images is now available at
1179 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
1180 with the name gdcmData.
1181 All the python scripts (including the package initialisation file
1182 gdcmPython/__init__.py) were adapated to take this change into
1183 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
1185 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1186 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
1187 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
1188 demo of the usage of this class.
1189 Compilation of this vtk part is only done when using the --enable-vtk
1190 at configure (or autogen.sh) stage.
1192 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1193 * More memory link related corrections and documentation fixes.
1195 - maximum info is obtained with a command of the form:
1196 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
1197 --show-reachable=yes PrintHeader
1198 - the remaining reachable blocks seem to come from the STL
1199 allocation scheme through the usage of map and list. It looks
1200 like this memory cannot be freed but it is not a memory leak
1201 (in fact further invocation to the STL would recollect the
1202 unused memory allthough it cannot explicitely be freed).
1203 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
1204 of displaying an image parsed with gdcm and displayed with VTK.
1205 Note: some images don't seem to work e.g.
1206 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
1207 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
1208 Allthough this weakens the semantics, it is a ditch attempt to
1209 make gdcm more thread friendly.
1211 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1212 * Memory link hunt (by using valgrind through the command
1213 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
1214 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
1215 gdcmHeader::_dicom_vr.
1216 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
1217 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
1219 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
1221 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1222 * src/Makefile.am now exports all the necessary include files at
1226 * UpdateGroupLength replaced by new one
1229 * UpdateGroupLength re-written using H-Table
1230 (named UpdateGroupLengthNew untill checks are over)
1232 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
1233 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
1234 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
1236 - gdcmHeader::GetPubElValSet removed.
1237 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
1238 UpdateGroupLength, WriteElements, Write.
1239 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
1240 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
1241 carried the same semantics.
1242 - src/gdcmHeaderIdo.cxx changed accordingly.
1243 - gdcmFile::WriteBase now regroups all the codes from previous
1244 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
1245 - enum FileType moved to gdcmCommon.h
1246 * src/gdcmHeader.cxx AddDefault trashed
1247 * gdcmGetXSize added
1248 * getimageDataSize now calls gdcmGetXSize
1249 * Test/*.cxx changed to agree with above changes
1251 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1252 * src/gdcmHeader.h: LoadElements() is not a public method anymore
1253 (to avoid double call by end user).
1254 * Test/*.cxx LoadElements() doesn't need to be called explicitely
1255 by end user, since gdcmHeader::gdcmHeader now handles it.
1257 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1258 * gdcm/Doc many doxygen changes:
1259 - Doxyfile now has two different versions, DoxyfileUsers that generates
1260 the html.users end users oriented documentation and
1261 DoxyfileDeveloppers that generates the html.developper developper
1262 oriented documentation.
1263 - README changed accordingly
1264 - requirement.txt removed (old design info moved to TODO).
1265 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
1266 DoxyMainPage.txt, DoxyPython.txt provide more information.
1267 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
1268 be updated by simply regenerating the docs with doxygen and copying
1269 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
1270 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
1271 all the tests in the form "if (<map>.count() >1)" were removed.
1272 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
1273 ill-formed documentation sections.
1274 * src/gdcmHeader.cxx: ditto
1276 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1277 * setup.py fixed for un*x (needed macro for stdint.h)
1278 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
1279 un*ces with sh-utils test utility.
1280 * gdcmPython/demo/test.py renamed to PrintHeader.py
1281 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
1282 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
1283 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
1284 * src/gdcm*.cxx JPR's bad inclusion fixed.
1286 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1287 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
1288 * gdcmPython/demo/test.py changed accordingly.
1290 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1291 * gdcmPython/Makefile.am fixed linking against libstdc++
1292 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
1293 * Swig subdir (historical tests of swig version 1.3.17++) removed
1294 * Test/testChangeEntete.cxx some lines commented out in order to make
1296 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
1297 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
1299 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1300 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
1301 hence the user doesn't need this explicit call.
1302 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
1303 i.e. LoadElements() call removed.
1304 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
1305 - src/Makefile.am declares the proper flag for g++.
1306 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
1307 for adding user defined new tags.
1308 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
1309 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
1310 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
1312 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
1313 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
1314 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
1315 src/Makefile.am : the project should properly compile and install
1316 with the autotools, included the python wrappers part.
1317 * gdcm.spec.in : added a spec file for RPM packaging.
1319 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1320 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
1322 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1323 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
1324 to exported to the environement (see gdcmPython/testSuite.py
1326 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
1327 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
1328 ElValue class renamed to gdcmElValue for obvious consistency reasons.
1329 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
1330 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
1332 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1333 * gdcmPython/__init__.py doesn't crash anymore when running in
1334 in InstallMode or PreInstallMode but with an environement given
1335 value of GDCM_DICT_PATH.
1336 * src/gdcmDictSet.[cxx/h] coding style.
1338 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1339 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
1340 * src/gdcm.h general comments moved to TODO, and README
1341 * src/gdcm.h should now be seen as a user commodity (including it
1342 should suffice to fully use gdcm). It is nowhere including within
1343 any of the kernel files src/*.cxx and src/*.h.
1345 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1346 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
1347 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
1349 * src/gdcm*.cxx only include their corresponding include file
1350 (as opposed to gdcm.h)
1351 * gdcmPython/gdcm.i changed accordingly
1352 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
1353 the autogen.sh generated "make snapshot" command to work.
1354 * autogen.sh removed history related references to crea package.
1356 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1357 * distutilsSwigCPlusPlus.py work around some swig portability
1360 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1361 * Eventually, python/gdcmPython was renamed to gdcmPython. This
1362 was done in a last ditch attempt to get setup.py _really_
1363 operationnal. The python/gdcmPython layaout add the advantage
1364 of hidding away the python related distutils specific files
1365 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
1366 Alas, the src directory was out of scope (i.e. it's relative
1367 position to setup.py was ../src) which made things impossible to
1368 handle (see previous version of python/setup.py). Crossing fingers...
1370 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1371 * python/setup.py now works on Un*x. (harder than I thougth)
1372 * python/distutilsSwigCPlusPlus.py can now have include files
1373 among the list of sources.
1375 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1376 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
1377 * modifications in MSVC projects
1379 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1380 * As stated by the first lines of Test/ExceptionAndPython/README, it
1381 looks like we can move back to original usage of exception within
1382 src/gdcm* and hence remove the errno stuff that was introduced
1383 as a quick and dirty fixture of this problem (added to the TODO).
1384 * Doc/Doxyfile configuration file for Doxygen and corresponding
1385 README file for usage added.
1386 * Test/testWrite.cxx added. This new test comes from a split of
1387 test.cxx that is now reverted to its original purpous i.e.
1388 testing the proper parsing of a Dicom related file.
1389 testWrite.cxx concentrates on testing the IO part of gdcm.
1390 * Test/bug1.cxx (containing a bug on WIn32) added.
1391 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1392 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1393 whose purpose is to publish the content of the TagNames of the
1394 Dicom public dictionnary were not accessible without an
1395 instance of class gdcmHeader.
1396 - those methods are now static methods of gdcmDictSet and hence
1397 require no instances at all to be invocated.
1398 - within gdcmDictSet this change required to change some method
1399 to class methods (i.e. are now static) among which SetDictPath
1400 (renamed to BuildDictPath) and LoadDefaultPubDict.
1401 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1402 the above changes by calling the new method classes of gdcmDictSet.
1403 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1404 the above to be effective.
1405 * python/gdcmPython: in order to wrap properly the above changes
1406 for Python, swig version now needs to be > 1.3.17.
1407 * python/gdcmPython/Makefile fixed to adapt itself to new
1408 configure/make shema introduced by Johan Montagnat (thanks for the
1409 contribution). Alas this Makefile cannot be turned into a proper
1410 Makefile.am without some heavy changes in the configure.in
1411 (for python dectection).
1412 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1413 now avoids publishing the empty entries.
1415 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1416 * python/setup.py : bug fix concerning install under windows
1417 ExtraPath reused :-P
1418 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1420 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1421 * Dicts/dicomV3.dic : remove double spaces !!!
1422 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1423 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1426 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1427 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1428 method. Doxygenation.
1429 * src/gdcm.h clean up of JPR spurious comments.
1431 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1432 * python/distutilsSwigCPlusPlus.py now properly collects the
1433 shadow classes generated by "swig -c++" (gdcm.py in our case)
1434 when using "python setup.py install".
1435 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1436 reexports the working classes.
1437 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1438 by the classical C errno scheme. This is to prevent an obscure
1439 behavior of the python wrappers when importing wxPython.wx prior
1440 to gdcmPython (which ended up in an abort call). An illustration
1441 of this oddity can be found in the Test/ExceptionAndPython
1442 subdir (see the README file). This problem probably due to
1443 an combination of g++ and dynamic loading.
1444 * added Test/ExceptionAndPython (see above)
1446 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1447 * Changed the layout of the python part to avoid bloating main
1448 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1449 i.e. the distutils arsenal. All the python related stuff is
1450 again in a python subdir, but the package itself is now in
1452 * setup.py was cleaned up:
1453 - pythonIncludePath removed
1454 - python setup.py bdist target is now functional.
1455 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1456 collision with other packages). gdcmPython/demo/*.py changed
1459 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1460 * python subdir moved to gdcmPython (preparation of distutils packaging).
1461 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1462 distutils installer is operational.
1463 * - gdcmPython/__init__.py now properly loads the swig generated
1464 shadow classes (from gdcm.py).
1465 - gdcmPython/demo/*.py changed to import the package gdcmPython
1466 instead of gdcmPython/demo/load.py.
1467 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1469 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1470 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1471 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1472 entries within the associated public Dicom dictionary resp. the same
1473 information but sorted by the fourth field (PAT, IMG, DIR) of the
1475 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1476 are now in the "???" group.
1477 - python/gdcm.i changed accordingly,
1478 - python/demo/printGroupedPublicDict.py added, that gives an example
1479 of the above new functionalities in Python.
1481 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1482 * src/gdcm.h, gdcmHeader.cxx:
1483 - historic references to glib's g_malloc and g_free (#defined)
1484 were definitively removed.
1485 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1486 * src/gdcmElValSet.cxx:
1487 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1488 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1489 - GetElValue(string) renamed to GetElValueByName.
1490 - Added GetElementByName(string).
1491 * src/gdcmHeader.cxx: added
1492 - GetPubElValRepByNumber(guint16, guint16)
1493 - GetPubElValRepByName(string)
1494 - GetShaElValRepByNumber(guint16, guint16)
1495 - GetShaElValRepByName(string)
1496 - GetShaElValByNumber(guint16, guint16)
1497 - GetShaElValRepByName(string)
1498 - GetElValRepByNumber(guint16, guint16)
1499 - GetElValRepByName(string)
1500 - GetElValByNumber(guint16, guint16)
1501 - GetElValRepByName(string)
1502 * Doc/requirements.txt added.
1504 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1505 * Test/Makefile building now depends on the one of libgdcm.so
1506 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1507 pixel data) aware which enables finding the address (offset) of
1508 the pixel data of JPEG encoded DICOM files. This leaves only a single
1509 file in the testSuite whose pixel data address (offset) is unknown.
1510 * python/testSuite.py changed accordingly.
1512 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1513 * VC++ has some strong limitations when working with the STL, as stated
1514 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1515 "Also note that some STL containers (map, set, queue, list, deque)
1516 cannot be exported. [...]
1517 Some STL classes contain nested classes. These classes can not
1519 This is caused by a designed limitation that once a template
1520 class is instantiated, it can not be re-instantiated and
1522 Since our usage of map<> is ubiquitous in gdcm, this "designed
1523 limitation" of VC++ is a pitfall.
1524 Hence the Python wrappers of gdcm cannot be incrementally linked
1525 against the c++ dynamic library. The dirty but only workaround is
1526 to forget about incremental link of dynamic libraries and to generate
1527 the Python wrappers library with the inclusions of the underlying C++
1529 The following modifications concern this matter on Win32/VC++:
1530 - wrapping python correct with standalone wrapped dll (don't use separate
1531 dll under windows !!!!)
1532 - python21_d debug mode enabled (ask Frog how to use it :-)
1533 - NO problem with having an STL member of class for example string in C++
1534 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1535 - Python test of dcmlib in Python is ok under windows on a large set
1537 * removed glib references
1538 * typedef's inserted in gdcm.i for correct swig type management
1540 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1541 * python/demo/*.py load.py extracted from test.py. Added explore.py
1542 that only displays required tags and testAll.py that parses all
1543 the files of the testsuite without using unittest.
1544 * python/testSuite.py other additional test on new files added.
1545 * Data/* new test files added accordingly to the testSuite.
1546 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1547 the vr in the file differs from the one of the dictionary.
1549 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1550 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1551 values, but limits itself to values which are below a user specified
1552 size (by default 1024 bytes).
1553 * python/gdcm.i : elements not loaded (because their size is above the
1554 user specified treshold) are exported with their TagKey as key of the
1555 python dictionary. This enables the testsuite to make some checks
1556 on the unloaded elements (since we have their offset and size).
1557 * python/testSuite.py
1558 - now tests for the existence and proper value of the pixel data
1559 - two new examples added.
1560 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1562 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1563 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1564 aware. See the strategy comments in gdcmHeader::FindeLength().
1565 * Test/test.cxx now accepts a filename as first argument.
1566 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1567 * python/testSuite.py changed to integrate test on above files.
1569 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1570 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1571 the vr was also RET.
1572 * python/testSuite.py more tests added.
1574 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1575 * python/testSuite.py unittest test suite added (uses Data)
1576 * Data/* dcm and acr files for the test suite.
1577 * glib dependance removed from un*x version. We now use ISO C99
1578 7.18 Integer types (see stdint.h)
1579 - python/Makefile, src/Makefile src/gdcm.h
1580 * src/ when an explicit vr (like dicom files) suddenly poped an
1581 implicit element we use to mark the underlying DictEntry of the
1582 concerned ElValue with "Implicit". This strategy was damageable
1583 too the public or provite dictionaries, since some of their vr
1584 would be changed. Since Header::FindLength heavily relies on the
1585 detection by Header::FindVR of falsely explicit elements, I
1586 added an extra ImplicitVr member to ElValue (boolean).
1587 The rest of the changes we the necessary adaptations.
1589 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1590 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1592 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1594 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1595 * Adaptation for porting to VC++:
1597 o forced to use std namespace (for string to be known)
1598 o all class use __declspec export style on WIN32
1599 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1600 (in stdlib.h on Win32 but in std:: for gcc)
1601 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1602 variable GDCM_DICT_PATH.
1603 * src/gdcmHeader.cxx verbose comments made discrete.
1605 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1606 * python/gdcm.i: added a typemap that converts a C++ hashing table
1607 to native Python dictionary.
1608 * python/demo/test.py:
1609 - now uses the native dictionary for exploration of gdcmHeader.
1610 - takes an optional filename argument (the file to parse).
1611 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1612 PubElVals hashing table.
1613 * Dicts/dicomV3.dic removed error prone trailing spaces.
1615 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1616 * Python wrapping process moved away from src/Makefile to
1617 newly created python/Makefile (as well as gdcm.i)
1618 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1619 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1620 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1621 from the environement variable GDCM_DICT_PATH (when existing).
1622 * src/gdcmDict::GetTag bug fix.
1624 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1625 * Straightforward temporary fixes for swig to build the python wrappers.
1626 src/Makefile now has a python working entry [by working we mean
1627 that we can import de shadow classes without errors].
1629 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1630 * hashtest.cxx removed (since allready in Test)
1631 * src/gdcmlib.h renamed to src/gdcm.h
1632 * src/dcm.i renamed to src/gdcm.i
1633 * src/Makefile prepared for python wrapping
1635 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1636 * src/gdcmHeader.cxx :
1637 - Parsing of header is now separated from loading of element values
1638 (see gdcmHeader::LoadElements).
1639 - general clean up of hopefully all file access (creation of
1640 ReadInt16 and ReadInt32)
1642 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1643 * src/gdcmHeader.cxx :
1644 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1646 - SetLgrElem renamed to SetLength
1647 - GetLgrElem renamed to GetLength
1648 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1649 * src/gdcmElValSet.cxx fixed both GetElValue methods
1650 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1651 due to IdoDude was cleaned out.
1653 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1654 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1655 concentrates on finding the value representation (when it exists).
1656 RecupLgr now only finds the element value length, and it avoids
1657 returning the unecessary skL (skipped length).
1658 Also, offsetCourant was simply removed (with taille_fich) since
1659 it was redundant with the File position internals (by using
1660 ftell and fseek). This also made skL (see above in RecupLgr) usage
1662 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1663 on the libido specificities which are handled through class
1665 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1668 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1669 * Truckload of changes. Parsing of header is barely functional
1670 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1672 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1673 * src/gdcmHeader.cxx many addons of low level methods
1675 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1676 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1677 and _IdDcmSWAP_LONG.
1679 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1680 * This corresponds to all the changes decided at the meeting of
1681 May 23 2002. Needless to say we are running late...