1 2004-02-05 Benoit Regrain
2 * ENH : add methods in gdcmObject to get the hash table or the list of
5 2004-02-04 Benoit Regrain
6 * FIX : even length for some strings when writting the dicom dir
7 * FIX : sort the images in the dicom dir
8 * FIX : Bug fix for python use of dicom dir
11 2004-02-04 Jean-Pierre Roux
12 * FIX : Final solution (?) for icone embedded images
13 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
14 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
15 add groups 6002, 6004, 6006, to allow 'clean' parsing of
16 gdcmData/gdcm-MR-SIEMENS-16.acr1
17 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
18 to make full checking easier
20 2004-02-04 Benoit Regrain
21 * FIX : WriteEntries : coding style & logic in parameters
22 * FIX : Set the elements to create the DicomDir in a dictionary file
24 2004-02-03 Benoit Regrain
25 * gdcmDirList : to parse a hard drive directory in recursive (or not)
26 * gdcmDicomDir : add the load of directory
27 * Bug fix and print add-on
29 2004-02-03 Jean-Pierre Roux
30 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
31 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
32 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
33 * FIX gdcmParser.cxx : 'group length' elements are now considered
34 as integers, even for shadow groups, when file is Implicit VR
36 2004-02-02 Jean-Pierre Roux
37 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
39 of the last synonym :-(
40 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
42 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
43 * FIX taking into account the possible 7fe0,0010 multiplicity
44 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
45 to allow removal of references to 7fe0,0010, to deal with
46 ACR-NEMA images, when 0028,0200 is meaningfull
48 2004-01-31 Jean-Pierre Roux
49 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
50 no longer writes 'Un' on disk
51 * FIX SQ elements with actual length are now dealt with corectly
52 * FIX gdcmFile::WriteBase make the difference, for color images, between
53 the length (for Palette expanded omages)
54 and Raw Length (non expanded image + Palette)
55 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
56 (that broke Write). Replaced by UL.
57 Aware user will reload the field if he
58 thinks it's necesssary
60 2004-01-30 Jean-Pierre Roux
61 * gdcmParser::CheckSwap() now defaults the filetype to ACR
62 when 'dirty Acr' is found, to be compliant with the new
65 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
66 (no DOUBLE images in kosher DICOM,
67 but so usefull for people that miss them ;-)
69 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
70 DICOMDIR related utilities (not checked as Windoze compliant)
72 2004-01-28 Jean-Pierre Roux
73 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
75 2004-01-27 Jean-Pierre Roux
76 * gdcmParser constructor has a new boolean param,'ignore_shadow',
77 to allow skipping the shadow elements, to save memory space.
78 The TRUE value for this param has to be used
79 with a FALSE value for the 'enable_sequence' param.
80 ('public elements' may be embedded in 'shadow Sequences')
81 * gdcmHeader methods now deal with 'embedded icones images' in the header
82 (even when an 'icone image sequence' is announced by the
83 element (0x0088,0x0200), but there is NO icone at all ...
85 * gdcmHeader sometimes Image Location value doesn't follow
86 the supposed processor endianity (see gdcmData/cr172241.dcm).
89 * gdcmHeader add the method
90 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
91 to get *all* the Header Entries with the same tag.
92 GetHeaderEntrySameName is probabely *useless*
93 (no meaning : Name is *not* an identifier within the Dictionnary)
95 2004-01-26 Benoit Regrain
96 * Bug fix in the print of hexadecimal representations. Remove long fields
97 in the print and add a third level of print to print them
99 2004-01-23 Benoit Regrain
100 * Bug fix on field having a VR = 'UI'. Assume that is a string field
101 * Bug fix on test suite after remove the strip made on not string fields
102 * Split the IsReadable method between gdcmParser which test that the file
103 is dicom and gdcmHeader which test that it's an image file
105 2004-01-22 Benoit Regrain
106 * DicomDir : clean code, add methods, set variables in protected or private
107 * gdcmUtil : bug fix for the clean string method
109 2004-01-19 Benoit Regrain
110 * Add the use of shadow dictionaries
111 * bug fix and coding style
113 2004-01-19 Benoit Regrain
114 * src/gdcmFile.cxx : bug fix concerning the close of file
115 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
116 * Add the update of header entries using the shadow library
118 2004-01-19 Benoit Regrain
119 * removal of file gdcmHeader2.cxx
120 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
121 inheriting from gdcmParser. This split is to prepare the integration
123 * bug fix under python
125 2004-01-16 Jean-Pierre Roux
126 * removal of class gdcmHeaderEntrySet
127 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
128 * add file gdcmHeader2.cxx
129 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
131 2004-01-15 Benoit Regrain
132 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
133 entries created while parsing the header. Thus, they will be destroyed
134 when the gdcmDictSet will be destroyed
135 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
138 2004-01-15 Benoit Regrain
139 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
140 made a fatal error because of the memory release at the end of program.
141 The problem was in vtkGdcmReader::ExecuteData where we were allocate
142 some memory and vtk seems to have some problems with that.
143 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
145 2004-01-14 Benoit Regrain
146 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
147 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
148 * src/*.[h|cxx] : make changes due to class name changes
149 * gdcmPython/demo/*.py : bug fix due to method names
151 2004-01-13 Benoit Regrain
152 * src/*.[h|cxx] : coding style
153 * vtk/*.[h|cxx] : coding style
155 2004-01-13 Benoit Regrain
156 * gdcmPython/testSuite.py : test the readable flag of file for tests
157 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
158 It's lied to the stl compilation by MSVC (windows, always windows...)
159 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
161 2004-01-12 Benoit Regrain
162 * src/*.h : add comments
163 * src/gdcmDictSet.h : set the method BuildDictPath in public
164 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
165 directly setted in the source code
166 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
169 2004-01-09 Benoit Regrain
170 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
171 * setup.py : use a reference to gdcmVERSION
173 2004-01-07 Benoit Regrain
174 * Modification to compile with the distutils.
177 2003-12-10 Benoit Regrain
178 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
179 can use a gdcmHeaderHelper to load datas
180 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
181 made in the source code
183 2003-12-10 Benoit Regrain
184 * Update Windows projects and .cvsignore files
186 2003-11-12 Jean-Pierre Roux
187 *ENH gdcmHeader constructor has one more parameter (default value : false)
188 that allows the user to 'go inside' the SeQuences only
190 gdcmElValSet:Print takes it into account
192 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
193 *ENH: Update gdcmPython/CMakeLists
194 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
195 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
197 2003-11-10 Jean-Pierre Roux
198 *FIX : gdcmHeader::LoadElements is now based
199 on the ListTag listElem member,
200 not longer on the TagElValueHT tagHt member
201 *ENH : PrintPubElVal shows (temporarily) both results,
202 with the tagHt member and the listElem member.
203 (it's easier to 'see' the problems when using Printheader)
205 *FIX : old private member LgrElem is now splitted into
206 ReadLength : Length actually found on disk (updated only
207 if bug fixing is necessary), for internal
209 UsableLength : Updated by FixFoundLength, to fix a bug
210 or to allow Parser going on.
211 Will allow to re-write a kosher header when a SeQuence
212 with a length (not 0000) is found
213 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
214 because gdcmElValSet::Add does not update ListElem
217 2003-11-07 Jean-Pierre Roux
218 *FIX misstyping in Transfert Syntax name table
219 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
220 when they have an actual length (not 0000 nor FFFFF)
221 (Nobody should care of it, but DICOMDIR explorers)
223 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
224 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
226 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
227 *ENH: vtkGdcmReader now supports LUT !
228 (vtkgdcmViewer for now is not able to use them though)
230 2003-11-05 Jean-Pierre Roux
231 * in testSuite.py : new files names for checking the package
232 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
233 that returns the pixel area size to the *aware* (vtk) user
234 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
236 2003-11-05 Benoit Regrain
237 * in testSuite.py : Modify the rules for checking the paths
238 : Explicit error messages
239 * in __init__.py : Related modif
241 2003-11-03 Jean-Pierre Roux
242 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
243 to be used by aware (vtk) users that want to manage
244 LUT (and no to turn the PALETTE image into an RGB pixels one)
245 * GetPixelType now returns 8U for 24 Bits images
246 (vtkGdcmReader compliant)
248 2003-10-31 Jean-Pierre Roux
249 * Removal of *all* gdcmData images and add them again
250 in order to loose the 'history' of un-anonymised images
252 2003-10-31 Jean-Pierre Roux
253 *RMV : removal of useless jBitsInJsample.h
254 for both 8 and 12 Bits JPEG Lossy Libraries
256 2003-10-31 Jean-Pierre Roux
257 * ENH : Add the functions gdcmFile::GetImageDataRaw
258 gdcmFile::GetImageDataIntoVectorRaw
259 that act as GetImageData and GetImageDataIntoVector
260 except the making of an RGB Plane from Gray Plane + LUT
261 Intended to aware (vtk) users who know how to manage
264 GetLUTRGBA return a R,G,B,A LUT if any
265 lgrTotaleRaw gives the 'Raw' length
266 GetImageDataRaw returns the gray Plane
267 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
268 (They stay Grey, just like with other Dicom viewers :-(
270 2003-10-30 Jean-Pierre Roux
271 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
273 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
274 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
275 being coherents dicom files.
277 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
278 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
280 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
281 *ENH: Two steps is necessary to please VC++ compiler...
282 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
283 *ENH: Add include dir to medcon lib
284 *FIX: only one function is being exported for now !
285 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
287 2003-10-29 Jean-Pierre Roux
288 * adding gdcmHeader::GetLUTRGBA
289 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
290 --> Mathieu, the modif u're waiting for is not yet committed
291 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
293 2003-10-27 Jean-Pierre Roux
294 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
295 . 00191113.dcm DermaColorLossLess.dcm
296 MxTwinLossLess.dcm RadBWLossLess.dcm
297 * ENH: For version prior to vtkImageViewer2 -r 1.19
298 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
300 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
301 * Removal of ido stuff in CMakeLists.txt
303 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
304 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
305 * FIX: remove a call to ->Modified ... see comments
306 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
308 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
309 * FIX: Problem with path for libvtkgdcmPython
310 * ENH: Try adding a search script for python site-package
311 * RMV: Remove some file from medcon lib that are not necessary
312 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
313 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
314 * FIX: More pragma disable fro VC++,
315 I don't think I break something as it is also disable in VTK/ITK.
316 But it fasten debug compilation time.
318 2003-10-23 Jean-Pierre Roux
319 * gdcm now deals with 16 Bits Run Length Encoded images
320 (they are compressed as 2 planes images,
321 one for the high Bytes, the other for low Bytes)
323 2003-10-22 Jean-Pierre Roux
324 * Now CheckRead takes into account :
325 the bugged 'Leonardo' Siemens images
326 the XA images, sent thru the burning VPRO station
327 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
330 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
331 * FIX: When copying a Makefile.am to CMakeLists.txt
332 one should remove the '\'
334 2003-10-22 Jean-Pierre Roux
335 * in gdcmData adding a bugged 'Leonardo' Siemens image
336 (wrong lengths in header)
337 OK with gdcm, KO with the other viewers :-)
338 * add a GE dlx XA image, thru the VEPRO burning station
341 2003-10-21 Jean-Pierre Roux
342 * in gdcmData add the checkvtkgdcmViewer.sh shell script
343 for a brutal checking of vtkgdcmViewer compliance
345 2003-10-21 Jean-Pierre Roux
346 * add the files for 'xmedcon' Jpeg Lossless library
347 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
349 2003-10-21 Jean-Pierre Roux
350 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
352 2003-10-21 Jean-Pierre Roux
353 * garbage Siemens 'Leonardo' images dealt with
354 (the patch is easy to remove)
355 * cosmetic changes to avoid warnings
357 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
358 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
359 no need to press 'r' now.
361 2003-10-20 Jean-Pierre Roux
362 * upgrade of checkRead.sh checkWrite.sh according
363 to new Jpeg Lossless decompressor
364 * add US.3405.1.dcm, a genuine RGB medical file ...
365 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
366 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
368 2003-10-15 Jean-Pierre Roux
369 * general anonymisation in gdcmData
370 * adding the 'color files' from
371 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
372 * adding some well knowed bugged-header images
373 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
374 waiting for their inclusion in Python testsuite
376 2003-10-15 Jean-Pierre Roux
377 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
378 no longer seg faults when file is not found
380 2003-10-14 Jean-Pierre Roux
381 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
383 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
384 * TODO: *.in file to genereate a UseGDCM later
386 2003-10-14 Jean-Pierre Roux
387 * Some supposed-to-be Dicom Images have no preamble.
388 OpenFile takes it into account
389 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
390 * Missing elements added in dicomV3.dic
391 (just to be affraid : have a look at
392 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
393 and do it again next year ;->
395 2003-10-13 Jean-Pierre Roux
396 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
397 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
398 But there are NOT. It's fixed !
400 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
401 * FIX: "jpeglib.h" was not found on VC++
402 * FIX: vtkgdcm was not being installed
404 2003-10-10 Jean-Pierre Roux
405 * ENH : OpenFile closes the file if it *really* doesn't look like
406 an ACR-NEMA / DICOM one.
407 * FIX : testWrite no longer writes an empty file if the source file
409 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
412 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
413 * FIX: CMake generate now documentation
414 * ENH: out of source doc build !
415 * ENH: Generate both user and dev documentation
416 * ENH: Should work on windows too
417 * ENH: Only one doxygen config.in file is needed
418 * FIX: make install should be ok now on ùnix plateform
419 * FIX: PATH to dictionary was wrong (missing /)
420 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
422 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
423 * vtkGdcmReader is now able to read rgb dicom file.
424 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
425 * added a gdcmViewer to vtk test, use mouse to control
426 window level & window width
428 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
429 * CMake-ification of gdcm, we have now two build system
430 * FIX: on cygwin Wsock32 doesn't exist
431 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
433 2003-10-06 Emanuel Ollart
434 * FIX : compilation process wad broken.
435 Changed gdcmViewer_sources to vtkgdcmViewer_sources
437 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
438 * change gdcmViewer -> vtkgdcmViewer
439 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
441 2003-10-06 Jean-Pierre Roux
442 * FIX :A few nasty patches to allow the reading of a lot of nasty images
443 ( e.g : well known GE images with a wrong elem length,
444 : Philips MRI Images with a wrong Huffman table)
445 * still to be done : allow the reading of bugged LEONARDO Siemens images
447 2003-10-03 Jean-Pierre Roux
448 * Odd length strings are padded with '\0' (not with spaces,
449 to remain compliant with already defined strings,
450 like Transfert Syntax UID and others)
452 2003-10-03 Jean-Pierre Roux
453 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
454 to allow displaying RGB images (not only by affim ;-)
456 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
457 * vtkGdcmReader is now able to read rgb dicom file.
458 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
460 2003-10-03 Jean-Pierre Roux
461 * A few nasty patches to allow the reading of a lot of nasty images
462 ( e.g : well known GE images with a wrong elem length,
463 : Philips MRI Images with a wrong Huffman table)
464 * still to be done : allow the reading of bugged LEONARDO Siemens images
466 2003-10-03 Jean-Pierre Roux
467 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
469 2003-10-03 Jean-Pierre Roux
470 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
471 to allow displaying RGB images (not only by affim ;-)
473 2003-10-03 Jean-Pierre Roux
474 * gdcmFile::GetImageDataIntoVector now
475 - deals with MultiFrames MultiFragments Run Length Encoded files
476 - deals with YcBcR (YBR_FULL) files
477 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
478 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
481 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
482 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
483 Two reasons: - clear things
484 - third parties acces gdcm through header files, so won't
485 suffer anymore VC++ complains
486 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
487 * add argv[1] in testvtkGdcmReader.cxx
490 2003-09-24 Jean-Pierre Roux
491 * The lines are now eigthy characters long.for
492 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
494 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
495 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
496 char* to std::string. Thus, the use of strdup becomes useless. (see
497 previous commis of Malaterre)
498 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
499 before the last Malaterre's commit.
501 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
502 * This commit should fix the Debug building under VC++, the problem
503 was mainly a mixture of debug and release lib being loaded at startup.
504 * I also remove a depency to a specific C function: strdup. Because I had
505 to force the link to msvcrtd (whereas strdup is in libc).
507 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
508 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
509 located in the gdcmCommon.h file. All use of reference of tha has been
510 changed to now use the variable GDCM_UNFOUND.
512 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
514 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
515 Dicom dictionary. The test suite can now be run again. Note:
516 I'm note very happy with the " (RET)" changes. I believe this
517 RETAINED comment should be dropped when parsing the dictionary.
520 - AUTHORS updated and now in alphabetical order
521 * Makefile.am now exports gdcm.dsw for Windoze users.
523 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
524 * cygwin complains about missing std:: in subdir Test/
526 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
527 * remove some methods that are now in gdcmHeaderHelper
529 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
530 * vtkGdcmReader set spacing and origin correctly
532 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
533 * Fix a few delete/delete[] mismatch
535 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
536 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
537 interpretation to data given by gdcmHeader. For instance there are
538 heuristics to get informations (look at different places).
539 * it also include a specific class: gdcmSerieHeaderHelper devoted to
540 sorting DICOM images based on different strategies.
541 * modified Makefiles accordingly.
543 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
544 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
545 when building in debug mode
546 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
547 src/win32/gdcmdll.dsp
548 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
550 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
551 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
553 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
554 * src/win32/libgdcmjpeg12.dsp was not dos format
555 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
556 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
558 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
559 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
561 * src/gdcmFile.cxx : bug fix in affectation type
562 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
563 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
564 * Modifs of MVSC projects to compile them. Not concerning 2 identic
565 symbols... future problem ?
567 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
568 * src/win32/libgdcmijpeg12.dsp was missing
569 * modified gdcm.dsw accordingly
571 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
572 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
574 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
575 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
576 commit of JPR (before his hollidays to facilitate our work).
577 * setup.py : bug fix in code. Modifications made while the last commit
578 of JPR. The code hasn't been tested before the commit... it's so
579 useless to make that (for best programmer that is JPR) !!!
581 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
582 * tagged the current version as Version0_3 (i.e. version 0.3)
584 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
585 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
586 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
587 * *.dsp : modifications to use new libgdcmijpeg8 library
588 * setup.py : bug fix on VTKPATH variable
589 * PACKAGER : adding all concerning windows
591 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
592 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
594 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
595 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
596 test suite reported error.
597 * PACKAGER file added (describes what a packager must do when
598 packaging a new release).
599 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
600 * configure.in: upgraded version number to 0.3.0
601 * fixing build of rpm (through rpm -ta):
602 - Doc/Makefile.am exports proper doxygen files
603 - src/jpeg/libijg8/Makefile.am exports the include files.
605 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
606 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
607 * src/gdcmHeader.h : formatting code
609 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
610 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
611 We were obtaining error message from vtk. Now, creation of file list
612 is made in an internal list to prevent this problem.
613 Bug fix when output is empty.
614 Bug fix in update of progress value. Previous commit for this was a bad
616 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
618 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
619 * src/gdcmHeader.h : added method to get the file name
620 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
621 files. Added method to remove all files on the input
622 Added FIXME comment concerning the bad parsing of header made by
623 ExecuteInformation method (in ExecuteData method)
625 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
626 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
627 when using make instal.
628 * src/gdcmFile.cxx : bug fix under Window after JPR commit
629 RQ : the JPR doesn't appear in the ChangeLog... normal for him
631 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
632 * setup.py : adding include dir of jpeg lib to compile all sources
633 * */Win32/*.dsp : JPR fix for windows compilation
635 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
636 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
638 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
639 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
641 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
642 * setup.py is again effective on un*x (takes into account the
643 addon of the jpeg library)
644 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
645 * Doc/Doxy* updated (includes above enhancements)
646 * INSTALL now points to web documentation
648 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
649 * src/gdcmHeader.h doesn't make unnecessary reference to
651 * gdcmPython/Makefile.am now avoids calling the wrappers for the
653 * src/gdcm*.[cxx|h] :
654 - to allow compilation with gcc 3.x
655 -- clean up of STL usage (added explicit usage of std::)
656 -- small fixes on exceptions.
657 Note: linking not tested !
658 - clean of doxygen comments to avoid warnings at documentation
660 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
661 dependent convertion).
663 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
664 * Clean up of previous JPR garbage commit (not even commented in the
666 - Test/Makefile.am removed the reference to unexisting testTS.cxx
667 - moved all jpeg related files from src to src/jpeg/libijg8, with
668 addition/modification of Makefile.am and configure.in.
669 - the testSuite is still brain damage (not guilty).
671 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
672 * WrapVTK.py : modifications to get correctly vtk source files to
674 * vtk/vtkGdcmReader.cxx : modification for an already existing name
675 (FileName -> Filename)
677 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
678 * vtk/vtkGdcmReader.[cxx/h]:
679 - UpdateProgress method should now be effective
680 - removed the limitation on having only images loaded (as opposed
682 - when building a stack of images/volume, a lesser number of
683 gdcmHeader and gdcmFile instances should be used (hopefully
684 accelerating things).
685 - when building a stack of images/volumes, files which are not
686 loadable (wrong path-filename, wrong permissions on existing file,
687 or file not parsable by gdcm) are replaced with a black image
688 in the stack (for the caller to notice the problem).
690 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
691 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
693 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
694 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
695 between standard library (std) and vtk library (problems are found
696 under Windows... thanks Windows !)
698 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
699 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
701 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
703 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
704 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
706 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
707 * When compiling with distutils (see setup.py) the C++ compiler is
708 called with different flags than the default ones (with automake).
709 In order to fix all those warning, I compiled gdcm with the command
710 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
711 and went for warning fixes:
712 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
713 up from unused variables.
714 - vtk/vtkGdcmReader.cxx: potential bug fix.
715 * src/gdcmHeader.h: Doxygen warning cleanup
717 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
719 - typemaps correction to take into account the systematic replacement
720 of "using namespace std" with std:: prefix e.g. std::list,
721 std::string... (cf changes of 2003-05-21).
722 - gdcmGlob global variable of type gdcmGlobal (defined in
723 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
724 exported to Python a as cvar.
725 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
726 and GetPubDictTagNamesByCategory() as a replacement for deprecated
727 gdcmDictSet.GetPubDictTagNames() and
728 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
730 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
731 with the above changes.
733 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
734 * setup.py, manifest.in : bug fix under linux
736 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
737 * Modification of setup.py to compile vtk part too. Then, we have 2
738 wrappers which must work with same distutils. For that, we have a
739 generic distutils in distusiltsWrapping.py ; with :
740 - build_extWrap class to wrap generically all extensions,
741 - ExtensionWrap base class for all wrapping extension that contains
743 - Wrapper interface which wrap sources
744 + In WrapSwig.py we have extension and wrapper for Swig
745 + In WrapVTK.py we have extension and wrapper for VTK
746 * MANIFEST.in : modifications to consider vtk directory and new python
747 files for compilation
749 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
750 * Added python wrappers of vtkGdcmReader vtk class (see the
751 source in vtk/vtkGdcmReader.cxx) :
752 - vtk/Makefile.am now builds a library
753 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
754 python library (as opposed to _gdcm.so wich are the python
755 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
756 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
758 - configure.in has an additional flag --enable-vtk that needs
759 to be set to enable compilation of vtk related code, that is:
760 + vtk/vtkGdcmReader.so and
761 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
762 + gdcmPython/vtkgdcmPython.so (see above)
763 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
764 be read when compressed or when HighBit + 1 != BitsStored),
765 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
766 the usage of the python wrapper of vtkGdcmReader vtk class.
767 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
768 * src/*.[h] all occurences of stl classes are now prefixed with
769 std::, and all occurences of "using namespace std;" where removed.
770 This is to avoid pollution of global namespace in included files.
771 Apparently vtk does not avoid this pitfall: when using both
772 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
773 collision of various stl members (principally cout...).
774 * gdcmPython/testSuite.py now cleanly removes temprory generated
776 * gdcmPython/gdcm.i now declares a typemap for std::string (to
777 comply with above changes)
779 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
780 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
781 * vtk/vtkGdcmReader.cxx now properly inports the image in the
782 vtk data structure (an image Flip was required).
783 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
784 * cosmetic changes in documentation.
786 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
787 * src/gdcmHeader.cxx: the constructor no longer exits when an
788 unexisting file is given as argument.
789 * The subdirectory Data (containing all the images used for the
790 test suite) is not part of this repository anymore. A new module
791 containing those images is now available at
792 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
793 with the name gdcmData.
794 All the python scripts (including the package initialisation file
795 gdcmPython/__init__.py) were adapated to take this change into
796 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
798 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
799 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
800 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
801 demo of the usage of this class.
802 Compilation of this vtk part is only done when using the --enable-vtk
803 at configure (or autogen.sh) stage.
805 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
806 * More memory link related corrections and documentation fixes.
808 - maximum info is obtained with a command of the form:
809 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
810 --show-reachable=yes PrintHeader
811 - the remaining reachable blocks seem to come from the STL
812 allocation scheme through the usage of map and list. It looks
813 like this memory cannot be freed but it is not a memory leak
814 (in fact further invocation to the STL would recollect the
815 unused memory allthough it cannot explicitely be freed).
816 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
817 of displaying an image parsed with gdcm and displayed with VTK.
818 Note: some images don't seem to work e.g.
819 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
820 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
821 Allthough this weakens the semantics, it is a ditch attempt to
822 make gdcm more thread friendly.
824 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
825 * Memory link hunt (by using valgrind through the command
826 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
827 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
828 gdcmHeader::_dicom_vr.
829 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
830 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
832 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
834 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
835 * src/Makefile.am now exports all the necessary include files at
839 * UpdateGroupLength replaced by new one
842 * UpdateGroupLength re-written using H-Table
843 (named UpdateGroupLengthNew untill checks are over)
845 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
846 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
847 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
849 - gdcmHeader::GetPubElValSet removed.
850 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
851 UpdateGroupLength, WriteElements, Write.
852 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
853 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
854 carried the same semantics.
855 - src/gdcmHeaderIdo.cxx changed accordingly.
856 - gdcmFile::WriteBase now regroups all the codes from previous
857 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
858 - enum FileType moved to gdcmCommon.h
859 * src/gdcmHeader.cxx AddDefault trashed
861 * getimageDataSize now calls gdcmGetXSize
862 * Test/*.cxx changed to agree with above changes
864 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
865 * src/gdcmHeader.h: LoadElements() is not a public method anymore
866 (to avoid double call by end user).
867 * Test/*.cxx LoadElements() doesn't need to be called explicitely
868 by end user, since gdcmHeader::gdcmHeader now handles it.
870 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
871 * gdcm/Doc many doxygen changes:
872 - Doxyfile now has two different versions, DoxyfileUsers that generates
873 the html.users end users oriented documentation and
874 DoxyfileDeveloppers that generates the html.developper developper
875 oriented documentation.
876 - README changed accordingly
877 - requirement.txt removed (old design info moved to TODO).
878 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
879 DoxyMainPage.txt, DoxyPython.txt provide more information.
880 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
881 be updated by simply regenerating the docs with doxygen and copying
882 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
883 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
884 all the tests in the form "if (<map>.count() >1)" were removed.
885 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
886 ill-formed documentation sections.
887 * src/gdcmHeader.cxx: ditto
889 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
890 * setup.py fixed for un*x (needed macro for stdint.h)
891 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
892 un*ces with sh-utils test utility.
893 * gdcmPython/demo/test.py renamed to PrintHeader.py
894 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
895 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
896 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
897 * src/gdcm*.cxx JPR's bad inclusion fixed.
899 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
900 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
901 * gdcmPython/demo/test.py changed accordingly.
903 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
904 * gdcmPython/Makefile.am fixed linking against libstdc++
905 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
906 * Swig subdir (historical tests of swig version 1.3.17++) removed
907 * Test/testChangeEntete.cxx some lines commented out in order to make
909 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
910 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
912 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
913 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
914 hence the user doesn't need this explicit call.
915 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
916 i.e. LoadElements() call removed.
917 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
918 - src/Makefile.am declares the proper flag for g++.
919 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
920 for adding user defined new tags.
921 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
922 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
923 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
925 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
926 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
927 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
928 src/Makefile.am : the project should properly compile and install
929 with the autotools, included the python wrappers part.
930 * gdcm.spec.in : added a spec file for RPM packaging.
932 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
933 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
935 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
936 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
937 to exported to the environement (see gdcmPython/testSuite.py
939 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
940 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
941 ElValue class renamed to gdcmElValue for obvious consistency reasons.
942 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
943 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
945 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
946 * gdcmPython/__init__.py doesn't crash anymore when running in
947 in InstallMode or PreInstallMode but with an environement given
948 value of GDCM_DICT_PATH.
949 * src/gdcmDictSet.[cxx/h] coding style.
951 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
952 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
953 * src/gdcm.h general comments moved to TODO, and README
954 * src/gdcm.h should now be seen as a user commodity (including it
955 should suffice to fully use gdcm). It is nowhere including within
956 any of the kernel files src/*.cxx and src/*.h.
958 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
959 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
960 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
962 * src/gdcm*.cxx only include their corresponding include file
963 (as opposed to gdcm.h)
964 * gdcmPython/gdcm.i changed accordingly
965 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
966 the autogen.sh generated "make snapshot" command to work.
967 * autogen.sh removed history related references to crea package.
969 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
970 * distutilsSwigCPlusPlus.py work around some swig portability
973 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
974 * Eventually, python/gdcmPython was renamed to gdcmPython. This
975 was done in a last ditch attempt to get setup.py _really_
976 operationnal. The python/gdcmPython layaout add the advantage
977 of hidding away the python related distutils specific files
978 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
979 Alas, the src directory was out of scope (i.e. it's relative
980 position to setup.py was ../src) which made things impossible to
981 handle (see previous version of python/setup.py). Crossing fingers...
983 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
984 * python/setup.py now works on Un*x. (harder than I thougth)
985 * python/distutilsSwigCPlusPlus.py can now have include files
986 among the list of sources.
988 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
989 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
990 * modifications in MSVC projects
992 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
993 * As stated by the first lines of Test/ExceptionAndPython/README, it
994 looks like we can move back to original usage of exception within
995 src/gdcm* and hence remove the errno stuff that was introduced
996 as a quick and dirty fixture of this problem (added to the TODO).
997 * Doc/Doxyfile configuration file for Doxygen and corresponding
998 README file for usage added.
999 * Test/testWrite.cxx added. This new test comes from a split of
1000 test.cxx that is now reverted to its original purpous i.e.
1001 testing the proper parsing of a Dicom related file.
1002 testWrite.cxx concentrates on testing the IO part of gdcm.
1003 * Test/bug1.cxx (containing a bug on WIn32) added.
1004 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
1005 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
1006 whose purpose is to publish the content of the TagNames of the
1007 Dicom public dictionnary were not accessible without an
1008 instance of class gdcmHeader.
1009 - those methods are now static methods of gdcmDictSet and hence
1010 require no instances at all to be invocated.
1011 - within gdcmDictSet this change required to change some method
1012 to class methods (i.e. are now static) among which SetDictPath
1013 (renamed to BuildDictPath) and LoadDefaultPubDict.
1014 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1015 the above changes by calling the new method classes of gdcmDictSet.
1016 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1017 the above to be effective.
1018 * python/gdcmPython: in order to wrap properly the above changes
1019 for Python, swig version now needs to be > 1.3.17.
1020 * python/gdcmPython/Makefile fixed to adapt itself to new
1021 configure/make shema introduced by Johan Montagnat (thanks for the
1022 contribution). Alas this Makefile cannot be turned into a proper
1023 Makefile.am without some heavy changes in the configure.in
1024 (for python dectection).
1025 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1026 now avoids publishing the empty entries.
1028 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1029 * python/setup.py : bug fix concerning install under windows
1030 ExtraPath reused :-P
1031 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1033 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1034 * Dicts/dicomV3.dic : remove double spaces !!!
1035 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1036 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1039 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1040 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1041 method. Doxygenation.
1042 * src/gdcm.h clean up of JPR spurious comments.
1044 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1045 * python/distutilsSwigCPlusPlus.py now properly collects the
1046 shadow classes generated by "swig -c++" (gdcm.py in our case)
1047 when using "python setup.py install".
1048 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1049 reexports the working classes.
1050 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1051 by the classical C errno scheme. This is to prevent an obscure
1052 behavior of the python wrappers when importing wxPython.wx prior
1053 to gdcmPython (which ended up in an abort call). An illustration
1054 of this oddity can be found in the Test/ExceptionAndPython
1055 subdir (see the README file). This problem probably due to
1056 an combination of g++ and dynamic loading.
1057 * added Test/ExceptionAndPython (see above)
1059 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1060 * Changed the layout of the python part to avoid bloating main
1061 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1062 i.e. the distutils arsenal. All the python related stuff is
1063 again in a python subdir, but the package itself is now in
1065 * setup.py was cleaned up:
1066 - pythonIncludePath removed
1067 - python setup.py bdist target is now functional.
1068 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1069 collision with other packages). gdcmPython/demo/*.py changed
1072 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1073 * python subdir moved to gdcmPython (preparation of distutils packaging).
1074 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1075 distutils installer is operational.
1076 * - gdcmPython/__init__.py now properly loads the swig generated
1077 shadow classes (from gdcm.py).
1078 - gdcmPython/demo/*.py changed to import the package gdcmPython
1079 instead of gdcmPython/demo/load.py.
1080 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1082 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1083 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1084 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1085 entries within the associated public Dicom dictionary resp. the same
1086 information but sorted by the fourth field (PAT, IMG, DIR) of the
1088 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1089 are now in the "???" group.
1090 - python/gdcm.i changed accordingly,
1091 - python/demo/printGroupedPublicDict.py added, that gives an example
1092 of the above new functionalities in Python.
1094 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1095 * src/gdcm.h, gdcmHeader.cxx:
1096 - historic references to glib's g_malloc and g_free (#defined)
1097 were definitively removed.
1098 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1099 * src/gdcmElValSet.cxx:
1100 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1101 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1102 - GetElValue(string) renamed to GetElValueByName.
1103 - Added GetElementByName(string).
1104 * src/gdcmHeader.cxx: added
1105 - GetPubElValRepByNumber(guint16, guint16)
1106 - GetPubElValRepByName(string)
1107 - GetShaElValRepByNumber(guint16, guint16)
1108 - GetShaElValRepByName(string)
1109 - GetShaElValByNumber(guint16, guint16)
1110 - GetShaElValRepByName(string)
1111 - GetElValRepByNumber(guint16, guint16)
1112 - GetElValRepByName(string)
1113 - GetElValByNumber(guint16, guint16)
1114 - GetElValRepByName(string)
1115 * Doc/requirements.txt added.
1117 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1118 * Test/Makefile building now depends on the one of libgdcm.so
1119 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1120 pixel data) aware which enables finding the address (offset) of
1121 the pixel data of JPEG encoded DICOM files. This leaves only a single
1122 file in the testSuite whose pixel data address (offset) is unknown.
1123 * python/testSuite.py changed accordingly.
1125 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1126 * VC++ has some strong limitations when working with the STL, as stated
1127 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1128 "Also note that some STL containers (map, set, queue, list, deque)
1129 cannot be exported. [...]
1130 Some STL classes contain nested classes. These classes can not
1132 This is caused by a designed limitation that once a template
1133 class is instantiated, it can not be re-instantiated and
1135 Since our usage of map<> is ubiquitous in gdcm, this "designed
1136 limitation" of VC++ is a pitfall.
1137 Hence the Python wrappers of gdcm cannot be incrementally linked
1138 against the c++ dynamic library. The dirty but only workaround is
1139 to forget about incremental link of dynamic libraries and to generate
1140 the Python wrappers library with the inclusions of the underlying C++
1142 The following modifications concern this matter on Win32/VC++:
1143 - wrapping python correct with standalone wrapped dll (don't use separate
1144 dll under windows !!!!)
1145 - python21_d debug mode enabled (ask Frog how to use it :-)
1146 - NO problem with having an STL member of class for example string in C++
1147 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1148 - Python test of dcmlib in Python is ok under windows on a large set
1150 * removed glib references
1151 * typedef's inserted in gdcm.i for correct swig type management
1153 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1154 * python/demo/*.py load.py extracted from test.py. Added explore.py
1155 that only displays required tags and testAll.py that parses all
1156 the files of the testsuite without using unittest.
1157 * python/testSuite.py other additional test on new files added.
1158 * Data/* new test files added accordingly to the testSuite.
1159 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1160 the vr in the file differs from the one of the dictionary.
1162 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1163 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1164 values, but limits itself to values which are below a user specified
1165 size (by default 1024 bytes).
1166 * python/gdcm.i : elements not loaded (because their size is above the
1167 user specified treshold) are exported with their TagKey as key of the
1168 python dictionary. This enables the testsuite to make some checks
1169 on the unloaded elements (since we have their offset and size).
1170 * python/testSuite.py
1171 - now tests for the existence and proper value of the pixel data
1172 - two new examples added.
1173 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1175 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1176 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1177 aware. See the strategy comments in gdcmHeader::FindeLength().
1178 * Test/test.cxx now accepts a filename as first argument.
1179 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1180 * python/testSuite.py changed to integrate test on above files.
1182 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1183 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1184 the vr was also RET.
1185 * python/testSuite.py more tests added.
1187 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1188 * python/testSuite.py unittest test suite added (uses Data)
1189 * Data/* dcm and acr files for the test suite.
1190 * glib dependance removed from un*x version. We now use ISO C99
1191 7.18 Integer types (see stdint.h)
1192 - python/Makefile, src/Makefile src/gdcm.h
1193 * src/ when an explicit vr (like dicom files) suddenly poped an
1194 implicit element we use to mark the underlying DictEntry of the
1195 concerned ElValue with "Implicit". This strategy was damageable
1196 too the public or provite dictionaries, since some of their vr
1197 would be changed. Since Header::FindLength heavily relies on the
1198 detection by Header::FindVR of falsely explicit elements, I
1199 added an extra ImplicitVr member to ElValue (boolean).
1200 The rest of the changes we the necessary adaptations.
1202 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1203 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1205 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1207 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1208 * Adaptation for porting to VC++:
1210 o forced to use std namespace (for string to be known)
1211 o all class use __declspec export style on WIN32
1212 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1213 (in stdlib.h on Win32 but in std:: for gcc)
1214 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1215 variable GDCM_DICT_PATH.
1216 * src/gdcmHeader.cxx verbose comments made discrete.
1218 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1219 * python/gdcm.i: added a typemap that converts a C++ hashing table
1220 to native Python dictionary.
1221 * python/demo/test.py:
1222 - now uses the native dictionary for exploration of gdcmHeader.
1223 - takes an optional filename argument (the file to parse).
1224 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1225 PubElVals hashing table.
1226 * Dicts/dicomV3.dic removed error prone trailing spaces.
1228 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1229 * Python wrapping process moved away from src/Makefile to
1230 newly created python/Makefile (as well as gdcm.i)
1231 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1232 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1233 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1234 from the environement variable GDCM_DICT_PATH (when existing).
1235 * src/gdcmDict::GetTag bug fix.
1237 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1238 * Straightforward temporary fixes for swig to build the python wrappers.
1239 src/Makefile now has a python working entry [by working we mean
1240 that we can import de shadow classes without errors].
1242 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1243 * hashtest.cxx removed (since allready in Test)
1244 * src/gdcmlib.h renamed to src/gdcm.h
1245 * src/dcm.i renamed to src/gdcm.i
1246 * src/Makefile prepared for python wrapping
1248 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1249 * src/gdcmHeader.cxx :
1250 - Parsing of header is now separated from loading of element values
1251 (see gdcmHeader::LoadElements).
1252 - general clean up of hopefully all file access (creation of
1253 ReadInt16 and ReadInt32)
1255 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1256 * src/gdcmHeader.cxx :
1257 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1259 - SetLgrElem renamed to SetLength
1260 - GetLgrElem renamed to GetLength
1261 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1262 * src/gdcmElValSet.cxx fixed both GetElValue methods
1263 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1264 due to IdoDude was cleaned out.
1266 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1267 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1268 concentrates on finding the value representation (when it exists).
1269 RecupLgr now only finds the element value length, and it avoids
1270 returning the unecessary skL (skipped length).
1271 Also, offsetCourant was simply removed (with taille_fich) since
1272 it was redundant with the File position internals (by using
1273 ftell and fseek). This also made skL (see above in RecupLgr) usage
1275 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1276 on the libido specificities which are handled through class
1278 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1281 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1282 * Truckload of changes. Parsing of header is barely functional
1283 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1285 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1286 * src/gdcmHeader.cxx many addons of low level methods
1288 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1289 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1290 and _IdDcmSWAP_LONG.
1292 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1293 * This corresponds to all the changes decided at the meeting of
1294 May 23 2002. Needless to say we are running late...