1 2004-02-04 Jean-Pierre Roux
2 * FIX : Final solution (?) for icone embedded images
3 * FIX : dicomVR.dic Overlay group is not *only* 6000, but 60xxx
4 (see http://medical.nema.org/dicom/2003/03_06PU.PDF)
5 add groups 6002, 6004, 6006, to allow 'clean' parsing of
6 gdcmData/gdcm-MR-SIEMENS-16.acr1
7 * ENH add gdcmData/checkWriteExplicit.sh gdcmData/checkWriteImplicit.sh
8 to make full checking easier
10 2004-02-04 Benoit Regrain
11 * FIX : WriteEntries : coding style & logic in parameters
13 2004-02-03 Benoit Regrain
14 * gdcmDirList : to parse a hard drive directory in recursive (or not)
15 * gdcmDicomDir : add the load of directory
16 * Bug fix and print add-on
18 2004-02-03 Jean-Pierre Roux
19 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
20 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
21 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
22 * FIX gdcmParser.cxx : 'group length' elements are now considered
23 as integers, even for shadow groups, when file is Implicit VR
25 2004-02-02 Jean-Pierre Roux
26 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
28 of the last synonym :-(
29 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
31 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
32 * FIX taking into account the possible 7fe0,0010 multiplicity
33 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
34 to allow removal of references to 7fe0,0010, to deal with
35 ACR-NEMA images, when 0028,0200 is meaningfull
37 2004-01-31 Jean-Pierre Roux
38 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
39 no longer writes 'Un' on disk
40 * FIX SQ elements with actual length are now dealt with corectly
41 * FIX gdcmFile::WriteBase make the difference, for color images, between
42 the length (for Palette expanded omages)
43 and Raw Length (non expanded image + Palette)
44 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
45 (that broke Write). Replaced by UL.
46 Aware user will reload the field if he
47 thinks it's necesssary
49 2004-01-30 Jean-Pierre Roux
50 * gdcmParser::CheckSwap() now defaults the filetype to ACR
51 when 'dirty Acr' is found, to be compliant with the new
54 * gdcmHeaderHelper :add Pixel Type 'FD', for dealing with 'double' images.
55 (no DOUBLE images in kosher DICOM,
56 but so usefull for people that miss them ;-)
58 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
59 DICOMDIR related utilities (not checked as Windoze compliant)
61 2004-01-28 Jean-Pierre Roux
62 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
64 2004-01-27 Jean-Pierre Roux
65 * gdcmParser constructor has a new boolean param,'ignore_shadow',
66 to allow skipping the shadow elements, to save memory space.
67 The TRUE value for this param has to be used
68 with a FALSE value for the 'enable_sequence' param.
69 ('public elements' may be embedded in 'shadow Sequences')
70 * gdcmHeader methods now deal with 'embedded icones images' in the header
71 (even when an 'icone image sequence' is announced by the
72 element (0x0088,0x0200), but there is NO icone at all ...
74 * gdcmHeader sometimes Image Location value doesn't follow
75 the supposed processor endianity (see gdcmData/cr172241.dcm).
78 * gdcmHeader add the method
79 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
80 to get *all* the Header Entries with the same tag.
81 GetHeaderEntrySameName is probabely *useless*
82 (no meaning : Name is *not* an identifier within the Dictionnary)
84 2004-01-26 Benoit Regrain
85 * Bug fix in the print of hexadecimal representations. Remove long fields
86 in the print and add a third level of print to print them
88 2004-01-23 Benoit Regrain
89 * Bug fix on field having a VR = 'UI'. Assume that is a string field
90 * Bug fix on test suite after remove the strip made on not string fields
91 * Split the IsReadable method between gdcmParser which test that the file
92 is dicom and gdcmHeader which test that it's an image file
94 2004-01-22 Benoit Regrain
95 * DicomDir : clean code, add methods, set variables in protected or private
96 * gdcmUtil : bug fix for the clean string method
98 2004-01-19 Benoit Regrain
99 * Add the use of shadow dictionaries
100 * bug fix and coding style
102 2004-01-19 Benoit Regrain
103 * src/gdcmFile.cxx : bug fix concerning the close of file
104 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
105 * Add the update of header entries using the shadow library
107 2004-01-19 Benoit Regrain
108 * removal of file gdcmHeader2.cxx
109 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
110 inheriting from gdcmParser. This split is to prepare the integration
112 * bug fix under python
114 2004-01-16 Jean-Pierre Roux
115 * removal of class gdcmHeaderEntrySet
116 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
117 * add file gdcmHeader2.cxx
118 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
120 2004-01-15 Benoit Regrain
121 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
122 entries created while parsing the header. Thus, they will be destroyed
123 when the gdcmDictSet will be destroyed
124 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
127 2004-01-15 Benoit Regrain
128 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
129 made a fatal error because of the memory release at the end of program.
130 The problem was in vtkGdcmReader::ExecuteData where we were allocate
131 some memory and vtk seems to have some problems with that.
132 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
134 2004-01-14 Benoit Regrain
135 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
136 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
137 * src/*.[h|cxx] : make changes due to class name changes
138 * gdcmPython/demo/*.py : bug fix due to method names
140 2004-01-13 Benoit Regrain
141 * src/*.[h|cxx] : coding style
142 * vtk/*.[h|cxx] : coding style
144 2004-01-13 Benoit Regrain
145 * gdcmPython/testSuite.py : test the readable flag of file for tests
146 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
147 It's lied to the stl compilation by MSVC (windows, always windows...)
148 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
150 2004-01-12 Benoit Regrain
151 * src/*.h : add comments
152 * src/gdcmDictSet.h : set the method BuildDictPath in public
153 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
154 directly setted in the source code
155 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
158 2004-01-09 Benoit Regrain
159 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
160 * setup.py : use a reference to gdcmVERSION
162 2004-01-07 Benoit Regrain
163 * Modification to compile with the distutils.
166 2003-12-10 Benoit Regrain
167 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
168 can use a gdcmHeaderHelper to load datas
169 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
170 made in the source code
172 2003-12-10 Benoit Regrain
173 * Update Windows projects and .cvsignore files
175 2003-11-12 Jean-Pierre Roux
176 *ENH gdcmHeader constructor has one more parameter (default value : false)
177 that allows the user to 'go inside' the SeQuences only
179 gdcmElValSet:Print takes it into account
181 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
182 *ENH: Update gdcmPython/CMakeLists
183 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
184 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
186 2003-11-10 Jean-Pierre Roux
187 *FIX : gdcmHeader::LoadElements is now based
188 on the ListTag listElem member,
189 not longer on the TagElValueHT tagHt member
190 *ENH : PrintPubElVal shows (temporarily) both results,
191 with the tagHt member and the listElem member.
192 (it's easier to 'see' the problems when using Printheader)
194 *FIX : old private member LgrElem is now splitted into
195 ReadLength : Length actually found on disk (updated only
196 if bug fixing is necessary), for internal
198 UsableLength : Updated by FixFoundLength, to fix a bug
199 or to allow Parser going on.
200 Will allow to re-write a kosher header when a SeQuence
201 with a length (not 0000) is found
202 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
203 because gdcmElValSet::Add does not update ListElem
206 2003-11-07 Jean-Pierre Roux
207 *FIX misstyping in Transfert Syntax name table
208 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
209 when they have an actual length (not 0000 nor FFFFF)
210 (Nobody should care of it, but DICOMDIR explorers)
212 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
213 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
215 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
216 *ENH: vtkGdcmReader now supports LUT !
217 (vtkgdcmViewer for now is not able to use them though)
219 2003-11-05 Jean-Pierre Roux
220 * in testSuite.py : new files names for checking the package
221 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
222 that returns the pixel area size to the *aware* (vtk) user
223 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
225 2003-11-05 Benoit Regrain
226 * in testSuite.py : Modify the rules for checking the paths
227 : Explicit error messages
228 * in __init__.py : Related modif
230 2003-11-03 Jean-Pierre Roux
231 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
232 to be used by aware (vtk) users that want to manage
233 LUT (and no to turn the PALETTE image into an RGB pixels one)
234 * GetPixelType now returns 8U for 24 Bits images
235 (vtkGdcmReader compliant)
237 2003-10-31 Jean-Pierre Roux
238 * Removal of *all* gdcmData images and add them again
239 in order to loose the 'history' of un-anonymised images
241 2003-10-31 Jean-Pierre Roux
242 *RMV : removal of useless jBitsInJsample.h
243 for both 8 and 12 Bits JPEG Lossy Libraries
245 2003-10-31 Jean-Pierre Roux
246 * ENH : Add the functions gdcmFile::GetImageDataRaw
247 gdcmFile::GetImageDataIntoVectorRaw
248 that act as GetImageData and GetImageDataIntoVector
249 except the making of an RGB Plane from Gray Plane + LUT
250 Intended to aware (vtk) users who know how to manage
253 GetLUTRGBA return a R,G,B,A LUT if any
254 lgrTotaleRaw gives the 'Raw' length
255 GetImageDataRaw returns the gray Plane
256 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
257 (They stay Grey, just like with other Dicom viewers :-(
259 2003-10-30 Jean-Pierre Roux
260 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
262 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
263 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
264 being coherents dicom files.
266 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
267 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
269 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
270 *ENH: Two steps is necessary to please VC++ compiler...
271 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
272 *ENH: Add include dir to medcon lib
273 *FIX: only one function is being exported for now !
274 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
276 2003-10-29 Jean-Pierre Roux
277 * adding gdcmHeader::GetLUTRGBA
278 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
279 --> Mathieu, the modif u're waiting for is not yet committed
280 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
282 2003-10-27 Jean-Pierre Roux
283 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
284 . 00191113.dcm DermaColorLossLess.dcm
285 MxTwinLossLess.dcm RadBWLossLess.dcm
286 * ENH: For version prior to vtkImageViewer2 -r 1.19
287 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
289 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
290 * Removal of ido stuff in CMakeLists.txt
292 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
293 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
294 * FIX: remove a call to ->Modified ... see comments
295 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
297 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
298 * FIX: Problem with path for libvtkgdcmPython
299 * ENH: Try adding a search script for python site-package
300 * RMV: Remove some file from medcon lib that are not necessary
301 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
302 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
303 * FIX: More pragma disable fro VC++,
304 I don't think I break something as it is also disable in VTK/ITK.
305 But it fasten debug compilation time.
307 2003-10-23 Jean-Pierre Roux
308 * gdcm now deals with 16 Bits Run Length Encoded images
309 (they are compressed as 2 planes images,
310 one for the high Bytes, the other for low Bytes)
312 2003-10-22 Jean-Pierre Roux
313 * Now CheckRead takes into account :
314 the bugged 'Leonardo' Siemens images
315 the XA images, sent thru the burning VPRO station
316 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
319 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
320 * FIX: When copying a Makefile.am to CMakeLists.txt
321 one should remove the '\'
323 2003-10-22 Jean-Pierre Roux
324 * in gdcmData adding a bugged 'Leonardo' Siemens image
325 (wrong lengths in header)
326 OK with gdcm, KO with the other viewers :-)
327 * add a GE dlx XA image, thru the VEPRO burning station
330 2003-10-21 Jean-Pierre Roux
331 * in gdcmData add the checkvtkgdcmViewer.sh shell script
332 for a brutal checking of vtkgdcmViewer compliance
334 2003-10-21 Jean-Pierre Roux
335 * add the files for 'xmedcon' Jpeg Lossless library
336 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
338 2003-10-21 Jean-Pierre Roux
339 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
341 2003-10-21 Jean-Pierre Roux
342 * garbage Siemens 'Leonardo' images dealt with
343 (the patch is easy to remove)
344 * cosmetic changes to avoid warnings
346 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
347 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
348 no need to press 'r' now.
350 2003-10-20 Jean-Pierre Roux
351 * upgrade of checkRead.sh checkWrite.sh according
352 to new Jpeg Lossless decompressor
353 * add US.3405.1.dcm, a genuine RGB medical file ...
354 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
355 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
357 2003-10-15 Jean-Pierre Roux
358 * general anonymisation in gdcmData
359 * adding the 'color files' from
360 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
361 * adding some well knowed bugged-header images
362 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
363 waiting for their inclusion in Python testsuite
365 2003-10-15 Jean-Pierre Roux
366 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
367 no longer seg faults when file is not found
369 2003-10-14 Jean-Pierre Roux
370 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
372 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
373 * TODO: *.in file to genereate a UseGDCM later
375 2003-10-14 Jean-Pierre Roux
376 * Some supposed-to-be Dicom Images have no preamble.
377 OpenFile takes it into account
378 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
379 * Missing elements added in dicomV3.dic
380 (just to be affraid : have a look at
381 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
382 and do it again next year ;->
384 2003-10-13 Jean-Pierre Roux
385 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
386 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
387 But there are NOT. It's fixed !
389 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
390 * FIX: "jpeglib.h" was not found on VC++
391 * FIX: vtkgdcm was not being installed
393 2003-10-10 Jean-Pierre Roux
394 * ENH : OpenFile closes the file if it *really* doesn't look like
395 an ACR-NEMA / DICOM one.
396 * FIX : testWrite no longer writes an empty file if the source file
398 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
401 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
402 * FIX: CMake generate now documentation
403 * ENH: out of source doc build !
404 * ENH: Generate both user and dev documentation
405 * ENH: Should work on windows too
406 * ENH: Only one doxygen config.in file is needed
407 * FIX: make install should be ok now on ùnix plateform
408 * FIX: PATH to dictionary was wrong (missing /)
409 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
411 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
412 * vtkGdcmReader is now able to read rgb dicom file.
413 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
414 * added a gdcmViewer to vtk test, use mouse to control
415 window level & window width
417 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
418 * CMake-ification of gdcm, we have now two build system
419 * FIX: on cygwin Wsock32 doesn't exist
420 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
422 2003-10-06 Emanuel Ollart
423 * FIX : compilation process wad broken.
424 Changed gdcmViewer_sources to vtkgdcmViewer_sources
426 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
427 * change gdcmViewer -> vtkgdcmViewer
428 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
430 2003-10-06 Jean-Pierre Roux
431 * FIX :A few nasty patches to allow the reading of a lot of nasty images
432 ( e.g : well known GE images with a wrong elem length,
433 : Philips MRI Images with a wrong Huffman table)
434 * still to be done : allow the reading of bugged LEONARDO Siemens images
436 2003-10-03 Jean-Pierre Roux
437 * Odd length strings are padded with '\0' (not with spaces,
438 to remain compliant with already defined strings,
439 like Transfert Syntax UID and others)
441 2003-10-03 Jean-Pierre Roux
442 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
443 to allow displaying RGB images (not only by affim ;-)
445 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
446 * vtkGdcmReader is now able to read rgb dicom file.
447 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
449 2003-10-03 Jean-Pierre Roux
450 * A few nasty patches to allow the reading of a lot of nasty images
451 ( e.g : well known GE images with a wrong elem length,
452 : Philips MRI Images with a wrong Huffman table)
453 * still to be done : allow the reading of bugged LEONARDO Siemens images
455 2003-10-03 Jean-Pierre Roux
456 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
458 2003-10-03 Jean-Pierre Roux
459 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
460 to allow displaying RGB images (not only by affim ;-)
462 2003-10-03 Jean-Pierre Roux
463 * gdcmFile::GetImageDataIntoVector now
464 - deals with MultiFrames MultiFragments Run Length Encoded files
465 - deals with YcBcR (YBR_FULL) files
466 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
467 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
470 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
471 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
472 Two reasons: - clear things
473 - third parties acces gdcm through header files, so won't
474 suffer anymore VC++ complains
475 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
476 * add argv[1] in testvtkGdcmReader.cxx
479 2003-09-24 Jean-Pierre Roux
480 * The lines are now eigthy characters long.for
481 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
483 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
484 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
485 char* to std::string. Thus, the use of strdup becomes useless. (see
486 previous commis of Malaterre)
487 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
488 before the last Malaterre's commit.
490 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
491 * This commit should fix the Debug building under VC++, the problem
492 was mainly a mixture of debug and release lib being loaded at startup.
493 * I also remove a depency to a specific C function: strdup. Because I had
494 to force the link to msvcrtd (whereas strdup is in libc).
496 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
497 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
498 located in the gdcmCommon.h file. All use of reference of tha has been
499 changed to now use the variable GDCM_UNFOUND.
501 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
503 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
504 Dicom dictionary. The test suite can now be run again. Note:
505 I'm note very happy with the " (RET)" changes. I believe this
506 RETAINED comment should be dropped when parsing the dictionary.
509 - AUTHORS updated and now in alphabetical order
510 * Makefile.am now exports gdcm.dsw for Windoze users.
512 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
513 * cygwin complains about missing std:: in subdir Test/
515 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
516 * remove some methods that are now in gdcmHeaderHelper
518 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
519 * vtkGdcmReader set spacing and origin correctly
521 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
522 * Fix a few delete/delete[] mismatch
524 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
525 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
526 interpretation to data given by gdcmHeader. For instance there are
527 heuristics to get informations (look at different places).
528 * it also include a specific class: gdcmSerieHeaderHelper devoted to
529 sorting DICOM images based on different strategies.
530 * modified Makefiles accordingly.
532 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
533 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
534 when building in debug mode
535 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
536 src/win32/gdcmdll.dsp
537 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
539 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
540 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
542 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
543 * src/win32/libgdcmjpeg12.dsp was not dos format
544 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
545 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
547 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
548 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
550 * src/gdcmFile.cxx : bug fix in affectation type
551 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
552 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
553 * Modifs of MVSC projects to compile them. Not concerning 2 identic
554 symbols... future problem ?
556 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
557 * src/win32/libgdcmijpeg12.dsp was missing
558 * modified gdcm.dsw accordingly
560 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
561 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
563 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
564 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
565 commit of JPR (before his hollidays to facilitate our work).
566 * setup.py : bug fix in code. Modifications made while the last commit
567 of JPR. The code hasn't been tested before the commit... it's so
568 useless to make that (for best programmer that is JPR) !!!
570 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
571 * tagged the current version as Version0_3 (i.e. version 0.3)
573 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
574 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
575 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
576 * *.dsp : modifications to use new libgdcmijpeg8 library
577 * setup.py : bug fix on VTKPATH variable
578 * PACKAGER : adding all concerning windows
580 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
581 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
583 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
584 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
585 test suite reported error.
586 * PACKAGER file added (describes what a packager must do when
587 packaging a new release).
588 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
589 * configure.in: upgraded version number to 0.3.0
590 * fixing build of rpm (through rpm -ta):
591 - Doc/Makefile.am exports proper doxygen files
592 - src/jpeg/libijg8/Makefile.am exports the include files.
594 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
595 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
596 * src/gdcmHeader.h : formatting code
598 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
599 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
600 We were obtaining error message from vtk. Now, creation of file list
601 is made in an internal list to prevent this problem.
602 Bug fix when output is empty.
603 Bug fix in update of progress value. Previous commit for this was a bad
605 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
607 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
608 * src/gdcmHeader.h : added method to get the file name
609 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
610 files. Added method to remove all files on the input
611 Added FIXME comment concerning the bad parsing of header made by
612 ExecuteInformation method (in ExecuteData method)
614 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
615 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
616 when using make instal.
617 * src/gdcmFile.cxx : bug fix under Window after JPR commit
618 RQ : the JPR doesn't appear in the ChangeLog... normal for him
620 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
621 * setup.py : adding include dir of jpeg lib to compile all sources
622 * */Win32/*.dsp : JPR fix for windows compilation
624 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
625 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
627 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
628 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
630 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
631 * setup.py is again effective on un*x (takes into account the
632 addon of the jpeg library)
633 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
634 * Doc/Doxy* updated (includes above enhancements)
635 * INSTALL now points to web documentation
637 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
638 * src/gdcmHeader.h doesn't make unnecessary reference to
640 * gdcmPython/Makefile.am now avoids calling the wrappers for the
642 * src/gdcm*.[cxx|h] :
643 - to allow compilation with gcc 3.x
644 -- clean up of STL usage (added explicit usage of std::)
645 -- small fixes on exceptions.
646 Note: linking not tested !
647 - clean of doxygen comments to avoid warnings at documentation
649 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
650 dependent convertion).
652 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
653 * Clean up of previous JPR garbage commit (not even commented in the
655 - Test/Makefile.am removed the reference to unexisting testTS.cxx
656 - moved all jpeg related files from src to src/jpeg/libijg8, with
657 addition/modification of Makefile.am and configure.in.
658 - the testSuite is still brain damage (not guilty).
660 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
661 * WrapVTK.py : modifications to get correctly vtk source files to
663 * vtk/vtkGdcmReader.cxx : modification for an already existing name
664 (FileName -> Filename)
666 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
667 * vtk/vtkGdcmReader.[cxx/h]:
668 - UpdateProgress method should now be effective
669 - removed the limitation on having only images loaded (as opposed
671 - when building a stack of images/volume, a lesser number of
672 gdcmHeader and gdcmFile instances should be used (hopefully
673 accelerating things).
674 - when building a stack of images/volumes, files which are not
675 loadable (wrong path-filename, wrong permissions on existing file,
676 or file not parsable by gdcm) are replaced with a black image
677 in the stack (for the caller to notice the problem).
679 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
680 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
682 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
683 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
684 between standard library (std) and vtk library (problems are found
685 under Windows... thanks Windows !)
687 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
688 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
690 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
692 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
693 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
695 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
696 * When compiling with distutils (see setup.py) the C++ compiler is
697 called with different flags than the default ones (with automake).
698 In order to fix all those warning, I compiled gdcm with the command
699 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
700 and went for warning fixes:
701 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
702 up from unused variables.
703 - vtk/vtkGdcmReader.cxx: potential bug fix.
704 * src/gdcmHeader.h: Doxygen warning cleanup
706 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
708 - typemaps correction to take into account the systematic replacement
709 of "using namespace std" with std:: prefix e.g. std::list,
710 std::string... (cf changes of 2003-05-21).
711 - gdcmGlob global variable of type gdcmGlobal (defined in
712 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
713 exported to Python a as cvar.
714 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
715 and GetPubDictTagNamesByCategory() as a replacement for deprecated
716 gdcmDictSet.GetPubDictTagNames() and
717 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
719 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
720 with the above changes.
722 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
723 * setup.py, manifest.in : bug fix under linux
725 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
726 * Modification of setup.py to compile vtk part too. Then, we have 2
727 wrappers which must work with same distutils. For that, we have a
728 generic distutils in distusiltsWrapping.py ; with :
729 - build_extWrap class to wrap generically all extensions,
730 - ExtensionWrap base class for all wrapping extension that contains
732 - Wrapper interface which wrap sources
733 + In WrapSwig.py we have extension and wrapper for Swig
734 + In WrapVTK.py we have extension and wrapper for VTK
735 * MANIFEST.in : modifications to consider vtk directory and new python
736 files for compilation
738 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
739 * Added python wrappers of vtkGdcmReader vtk class (see the
740 source in vtk/vtkGdcmReader.cxx) :
741 - vtk/Makefile.am now builds a library
742 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
743 python library (as opposed to _gdcm.so wich are the python
744 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
745 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
747 - configure.in has an additional flag --enable-vtk that needs
748 to be set to enable compilation of vtk related code, that is:
749 + vtk/vtkGdcmReader.so and
750 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
751 + gdcmPython/vtkgdcmPython.so (see above)
752 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
753 be read when compressed or when HighBit + 1 != BitsStored),
754 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
755 the usage of the python wrapper of vtkGdcmReader vtk class.
756 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
757 * src/*.[h] all occurences of stl classes are now prefixed with
758 std::, and all occurences of "using namespace std;" where removed.
759 This is to avoid pollution of global namespace in included files.
760 Apparently vtk does not avoid this pitfall: when using both
761 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
762 collision of various stl members (principally cout...).
763 * gdcmPython/testSuite.py now cleanly removes temprory generated
765 * gdcmPython/gdcm.i now declares a typemap for std::string (to
766 comply with above changes)
768 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
769 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
770 * vtk/vtkGdcmReader.cxx now properly inports the image in the
771 vtk data structure (an image Flip was required).
772 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
773 * cosmetic changes in documentation.
775 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
776 * src/gdcmHeader.cxx: the constructor no longer exits when an
777 unexisting file is given as argument.
778 * The subdirectory Data (containing all the images used for the
779 test suite) is not part of this repository anymore. A new module
780 containing those images is now available at
781 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
782 with the name gdcmData.
783 All the python scripts (including the package initialisation file
784 gdcmPython/__init__.py) were adapated to take this change into
785 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
787 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
788 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
789 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
790 demo of the usage of this class.
791 Compilation of this vtk part is only done when using the --enable-vtk
792 at configure (or autogen.sh) stage.
794 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
795 * More memory link related corrections and documentation fixes.
797 - maximum info is obtained with a command of the form:
798 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
799 --show-reachable=yes PrintHeader
800 - the remaining reachable blocks seem to come from the STL
801 allocation scheme through the usage of map and list. It looks
802 like this memory cannot be freed but it is not a memory leak
803 (in fact further invocation to the STL would recollect the
804 unused memory allthough it cannot explicitely be freed).
805 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
806 of displaying an image parsed with gdcm and displayed with VTK.
807 Note: some images don't seem to work e.g.
808 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
809 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
810 Allthough this weakens the semantics, it is a ditch attempt to
811 make gdcm more thread friendly.
813 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
814 * Memory link hunt (by using valgrind through the command
815 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
816 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
817 gdcmHeader::_dicom_vr.
818 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
819 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
821 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
823 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
824 * src/Makefile.am now exports all the necessary include files at
828 * UpdateGroupLength replaced by new one
831 * UpdateGroupLength re-written using H-Table
832 (named UpdateGroupLengthNew untill checks are over)
834 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
835 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
836 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
838 - gdcmHeader::GetPubElValSet removed.
839 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
840 UpdateGroupLength, WriteElements, Write.
841 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
842 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
843 carried the same semantics.
844 - src/gdcmHeaderIdo.cxx changed accordingly.
845 - gdcmFile::WriteBase now regroups all the codes from previous
846 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
847 - enum FileType moved to gdcmCommon.h
848 * src/gdcmHeader.cxx AddDefault trashed
850 * getimageDataSize now calls gdcmGetXSize
851 * Test/*.cxx changed to agree with above changes
853 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
854 * src/gdcmHeader.h: LoadElements() is not a public method anymore
855 (to avoid double call by end user).
856 * Test/*.cxx LoadElements() doesn't need to be called explicitely
857 by end user, since gdcmHeader::gdcmHeader now handles it.
859 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
860 * gdcm/Doc many doxygen changes:
861 - Doxyfile now has two different versions, DoxyfileUsers that generates
862 the html.users end users oriented documentation and
863 DoxyfileDeveloppers that generates the html.developper developper
864 oriented documentation.
865 - README changed accordingly
866 - requirement.txt removed (old design info moved to TODO).
867 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
868 DoxyMainPage.txt, DoxyPython.txt provide more information.
869 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
870 be updated by simply regenerating the docs with doxygen and copying
871 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
872 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
873 all the tests in the form "if (<map>.count() >1)" were removed.
874 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
875 ill-formed documentation sections.
876 * src/gdcmHeader.cxx: ditto
878 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
879 * setup.py fixed for un*x (needed macro for stdint.h)
880 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
881 un*ces with sh-utils test utility.
882 * gdcmPython/demo/test.py renamed to PrintHeader.py
883 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
884 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
885 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
886 * src/gdcm*.cxx JPR's bad inclusion fixed.
888 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
889 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
890 * gdcmPython/demo/test.py changed accordingly.
892 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
893 * gdcmPython/Makefile.am fixed linking against libstdc++
894 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
895 * Swig subdir (historical tests of swig version 1.3.17++) removed
896 * Test/testChangeEntete.cxx some lines commented out in order to make
898 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
899 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
901 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
902 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
903 hence the user doesn't need this explicit call.
904 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
905 i.e. LoadElements() call removed.
906 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
907 - src/Makefile.am declares the proper flag for g++.
908 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
909 for adding user defined new tags.
910 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
911 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
912 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
914 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
915 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
916 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
917 src/Makefile.am : the project should properly compile and install
918 with the autotools, included the python wrappers part.
919 * gdcm.spec.in : added a spec file for RPM packaging.
921 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
922 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
924 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
925 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
926 to exported to the environement (see gdcmPython/testSuite.py
928 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
929 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
930 ElValue class renamed to gdcmElValue for obvious consistency reasons.
931 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
932 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
934 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
935 * gdcmPython/__init__.py doesn't crash anymore when running in
936 in InstallMode or PreInstallMode but with an environement given
937 value of GDCM_DICT_PATH.
938 * src/gdcmDictSet.[cxx/h] coding style.
940 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
941 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
942 * src/gdcm.h general comments moved to TODO, and README
943 * src/gdcm.h should now be seen as a user commodity (including it
944 should suffice to fully use gdcm). It is nowhere including within
945 any of the kernel files src/*.cxx and src/*.h.
947 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
948 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
949 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
951 * src/gdcm*.cxx only include their corresponding include file
952 (as opposed to gdcm.h)
953 * gdcmPython/gdcm.i changed accordingly
954 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
955 the autogen.sh generated "make snapshot" command to work.
956 * autogen.sh removed history related references to crea package.
958 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
959 * distutilsSwigCPlusPlus.py work around some swig portability
962 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
963 * Eventually, python/gdcmPython was renamed to gdcmPython. This
964 was done in a last ditch attempt to get setup.py _really_
965 operationnal. The python/gdcmPython layaout add the advantage
966 of hidding away the python related distutils specific files
967 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
968 Alas, the src directory was out of scope (i.e. it's relative
969 position to setup.py was ../src) which made things impossible to
970 handle (see previous version of python/setup.py). Crossing fingers...
972 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
973 * python/setup.py now works on Un*x. (harder than I thougth)
974 * python/distutilsSwigCPlusPlus.py can now have include files
975 among the list of sources.
977 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
978 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
979 * modifications in MSVC projects
981 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
982 * As stated by the first lines of Test/ExceptionAndPython/README, it
983 looks like we can move back to original usage of exception within
984 src/gdcm* and hence remove the errno stuff that was introduced
985 as a quick and dirty fixture of this problem (added to the TODO).
986 * Doc/Doxyfile configuration file for Doxygen and corresponding
987 README file for usage added.
988 * Test/testWrite.cxx added. This new test comes from a split of
989 test.cxx that is now reverted to its original purpous i.e.
990 testing the proper parsing of a Dicom related file.
991 testWrite.cxx concentrates on testing the IO part of gdcm.
992 * Test/bug1.cxx (containing a bug on WIn32) added.
993 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
994 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
995 whose purpose is to publish the content of the TagNames of the
996 Dicom public dictionnary were not accessible without an
997 instance of class gdcmHeader.
998 - those methods are now static methods of gdcmDictSet and hence
999 require no instances at all to be invocated.
1000 - within gdcmDictSet this change required to change some method
1001 to class methods (i.e. are now static) among which SetDictPath
1002 (renamed to BuildDictPath) and LoadDefaultPubDict.
1003 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
1004 the above changes by calling the new method classes of gdcmDictSet.
1005 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
1006 the above to be effective.
1007 * python/gdcmPython: in order to wrap properly the above changes
1008 for Python, swig version now needs to be > 1.3.17.
1009 * python/gdcmPython/Makefile fixed to adapt itself to new
1010 configure/make shema introduced by Johan Montagnat (thanks for the
1011 contribution). Alas this Makefile cannot be turned into a proper
1012 Makefile.am without some heavy changes in the configure.in
1013 (for python dectection).
1014 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1015 now avoids publishing the empty entries.
1017 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1018 * python/setup.py : bug fix concerning install under windows
1019 ExtraPath reused :-P
1020 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1022 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1023 * Dicts/dicomV3.dic : remove double spaces !!!
1024 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1025 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1028 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1029 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1030 method. Doxygenation.
1031 * src/gdcm.h clean up of JPR spurious comments.
1033 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1034 * python/distutilsSwigCPlusPlus.py now properly collects the
1035 shadow classes generated by "swig -c++" (gdcm.py in our case)
1036 when using "python setup.py install".
1037 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1038 reexports the working classes.
1039 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1040 by the classical C errno scheme. This is to prevent an obscure
1041 behavior of the python wrappers when importing wxPython.wx prior
1042 to gdcmPython (which ended up in an abort call). An illustration
1043 of this oddity can be found in the Test/ExceptionAndPython
1044 subdir (see the README file). This problem probably due to
1045 an combination of g++ and dynamic loading.
1046 * added Test/ExceptionAndPython (see above)
1048 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1049 * Changed the layout of the python part to avoid bloating main
1050 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1051 i.e. the distutils arsenal. All the python related stuff is
1052 again in a python subdir, but the package itself is now in
1054 * setup.py was cleaned up:
1055 - pythonIncludePath removed
1056 - python setup.py bdist target is now functional.
1057 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1058 collision with other packages). gdcmPython/demo/*.py changed
1061 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1062 * python subdir moved to gdcmPython (preparation of distutils packaging).
1063 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1064 distutils installer is operational.
1065 * - gdcmPython/__init__.py now properly loads the swig generated
1066 shadow classes (from gdcm.py).
1067 - gdcmPython/demo/*.py changed to import the package gdcmPython
1068 instead of gdcmPython/demo/load.py.
1069 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1071 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1072 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1073 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1074 entries within the associated public Dicom dictionary resp. the same
1075 information but sorted by the fourth field (PAT, IMG, DIR) of the
1077 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1078 are now in the "???" group.
1079 - python/gdcm.i changed accordingly,
1080 - python/demo/printGroupedPublicDict.py added, that gives an example
1081 of the above new functionalities in Python.
1083 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1084 * src/gdcm.h, gdcmHeader.cxx:
1085 - historic references to glib's g_malloc and g_free (#defined)
1086 were definitively removed.
1087 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1088 * src/gdcmElValSet.cxx:
1089 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1090 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1091 - GetElValue(string) renamed to GetElValueByName.
1092 - Added GetElementByName(string).
1093 * src/gdcmHeader.cxx: added
1094 - GetPubElValRepByNumber(guint16, guint16)
1095 - GetPubElValRepByName(string)
1096 - GetShaElValRepByNumber(guint16, guint16)
1097 - GetShaElValRepByName(string)
1098 - GetShaElValByNumber(guint16, guint16)
1099 - GetShaElValRepByName(string)
1100 - GetElValRepByNumber(guint16, guint16)
1101 - GetElValRepByName(string)
1102 - GetElValByNumber(guint16, guint16)
1103 - GetElValRepByName(string)
1104 * Doc/requirements.txt added.
1106 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1107 * Test/Makefile building now depends on the one of libgdcm.so
1108 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1109 pixel data) aware which enables finding the address (offset) of
1110 the pixel data of JPEG encoded DICOM files. This leaves only a single
1111 file in the testSuite whose pixel data address (offset) is unknown.
1112 * python/testSuite.py changed accordingly.
1114 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1115 * VC++ has some strong limitations when working with the STL, as stated
1116 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1117 "Also note that some STL containers (map, set, queue, list, deque)
1118 cannot be exported. [...]
1119 Some STL classes contain nested classes. These classes can not
1121 This is caused by a designed limitation that once a template
1122 class is instantiated, it can not be re-instantiated and
1124 Since our usage of map<> is ubiquitous in gdcm, this "designed
1125 limitation" of VC++ is a pitfall.
1126 Hence the Python wrappers of gdcm cannot be incrementally linked
1127 against the c++ dynamic library. The dirty but only workaround is
1128 to forget about incremental link of dynamic libraries and to generate
1129 the Python wrappers library with the inclusions of the underlying C++
1131 The following modifications concern this matter on Win32/VC++:
1132 - wrapping python correct with standalone wrapped dll (don't use separate
1133 dll under windows !!!!)
1134 - python21_d debug mode enabled (ask Frog how to use it :-)
1135 - NO problem with having an STL member of class for example string in C++
1136 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1137 - Python test of dcmlib in Python is ok under windows on a large set
1139 * removed glib references
1140 * typedef's inserted in gdcm.i for correct swig type management
1142 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1143 * python/demo/*.py load.py extracted from test.py. Added explore.py
1144 that only displays required tags and testAll.py that parses all
1145 the files of the testsuite without using unittest.
1146 * python/testSuite.py other additional test on new files added.
1147 * Data/* new test files added accordingly to the testSuite.
1148 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1149 the vr in the file differs from the one of the dictionary.
1151 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1152 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1153 values, but limits itself to values which are below a user specified
1154 size (by default 1024 bytes).
1155 * python/gdcm.i : elements not loaded (because their size is above the
1156 user specified treshold) are exported with their TagKey as key of the
1157 python dictionary. This enables the testsuite to make some checks
1158 on the unloaded elements (since we have their offset and size).
1159 * python/testSuite.py
1160 - now tests for the existence and proper value of the pixel data
1161 - two new examples added.
1162 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1164 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1165 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1166 aware. See the strategy comments in gdcmHeader::FindeLength().
1167 * Test/test.cxx now accepts a filename as first argument.
1168 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1169 * python/testSuite.py changed to integrate test on above files.
1171 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1172 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1173 the vr was also RET.
1174 * python/testSuite.py more tests added.
1176 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1177 * python/testSuite.py unittest test suite added (uses Data)
1178 * Data/* dcm and acr files for the test suite.
1179 * glib dependance removed from un*x version. We now use ISO C99
1180 7.18 Integer types (see stdint.h)
1181 - python/Makefile, src/Makefile src/gdcm.h
1182 * src/ when an explicit vr (like dicom files) suddenly poped an
1183 implicit element we use to mark the underlying DictEntry of the
1184 concerned ElValue with "Implicit". This strategy was damageable
1185 too the public or provite dictionaries, since some of their vr
1186 would be changed. Since Header::FindLength heavily relies on the
1187 detection by Header::FindVR of falsely explicit elements, I
1188 added an extra ImplicitVr member to ElValue (boolean).
1189 The rest of the changes we the necessary adaptations.
1191 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1192 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1194 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1196 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1197 * Adaptation for porting to VC++:
1199 o forced to use std namespace (for string to be known)
1200 o all class use __declspec export style on WIN32
1201 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1202 (in stdlib.h on Win32 but in std:: for gcc)
1203 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1204 variable GDCM_DICT_PATH.
1205 * src/gdcmHeader.cxx verbose comments made discrete.
1207 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1208 * python/gdcm.i: added a typemap that converts a C++ hashing table
1209 to native Python dictionary.
1210 * python/demo/test.py:
1211 - now uses the native dictionary for exploration of gdcmHeader.
1212 - takes an optional filename argument (the file to parse).
1213 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1214 PubElVals hashing table.
1215 * Dicts/dicomV3.dic removed error prone trailing spaces.
1217 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1218 * Python wrapping process moved away from src/Makefile to
1219 newly created python/Makefile (as well as gdcm.i)
1220 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1221 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1222 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1223 from the environement variable GDCM_DICT_PATH (when existing).
1224 * src/gdcmDict::GetTag bug fix.
1226 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1227 * Straightforward temporary fixes for swig to build the python wrappers.
1228 src/Makefile now has a python working entry [by working we mean
1229 that we can import de shadow classes without errors].
1231 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1232 * hashtest.cxx removed (since allready in Test)
1233 * src/gdcmlib.h renamed to src/gdcm.h
1234 * src/dcm.i renamed to src/gdcm.i
1235 * src/Makefile prepared for python wrapping
1237 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1238 * src/gdcmHeader.cxx :
1239 - Parsing of header is now separated from loading of element values
1240 (see gdcmHeader::LoadElements).
1241 - general clean up of hopefully all file access (creation of
1242 ReadInt16 and ReadInt32)
1244 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1245 * src/gdcmHeader.cxx :
1246 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1248 - SetLgrElem renamed to SetLength
1249 - GetLgrElem renamed to GetLength
1250 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1251 * src/gdcmElValSet.cxx fixed both GetElValue methods
1252 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1253 due to IdoDude was cleaned out.
1255 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1256 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1257 concentrates on finding the value representation (when it exists).
1258 RecupLgr now only finds the element value length, and it avoids
1259 returning the unecessary skL (skipped length).
1260 Also, offsetCourant was simply removed (with taille_fich) since
1261 it was redundant with the File position internals (by using
1262 ftell and fseek). This also made skL (see above in RecupLgr) usage
1264 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1265 on the libido specificities which are handled through class
1267 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1270 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1271 * Truckload of changes. Parsing of header is barely functional
1272 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1274 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1275 * src/gdcmHeader.cxx many addons of low level methods
1277 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1278 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1279 and _IdDcmSWAP_LONG.
1281 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1282 * This corresponds to all the changes decided at the meeting of
1283 May 23 2002. Needless to say we are running late...