1 2004-02-04 Benoit Regrain
2 * FIX : WriteEntries : coding style & logic in parameters
4 2004-02-03 Benoit Regrain
5 * gdcmDirList : to parse a hard drive directory in recursive (or not)
6 * gdcmDicomDir : add the load of directory
7 * Bug fix and print add-on
9 2004-02-03 Jean-Pierre Roux
10 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
11 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
12 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
13 * FIX gdcmParser.cxx : 'group length' elements are now considered
14 as integers, even for shadow groups, when file is Implicit VR
16 2004-02-02 Jean-Pierre Roux
17 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
19 of the last synonym :-(
20 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
22 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
23 * FIX taking into account the possible 7fe0,0010 multiplicity
24 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
25 to allow removal of references to 7fe0,0010, to deal with
26 ACR-NEMA images, when 0028,0200 is meaningfull
28 2004-01-31 Jean-Pierre Roux
29 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
30 no longer writes 'Un' on disk
31 * FIX SQ elements with actual length are now dealt with corectly
32 * FIX gdcmFile::WriteBase make the difference, for color images, between
33 the length (for Palette expanded omages)
34 and Raw Length (non expanded image + Palette)
35 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
36 (that broke Write). Replaced by UL.
37 Aware user will reload the field if he
38 thinks it's necesssary
40 2004-01-30 Jean-Pierre Roux
41 * gdcmParser::CheckSwap() now defaults the filetype to ACR
42 when 'dirty Acr' is found, to be compliant with the new
45 * gdcmHederlHelper :add Pixel Type 'FD', for dealing with 'double' images.
46 (no DOUBLE images in kosher DICOM,
47 but so usefull for people that miss them ;-)
49 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
50 DICOMDIR related utilities (not checked as Windoze compliant)
52 2004-01-28 Jean-Pierre Roux
53 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
55 2004-01-27 Jean-Pierre Roux
56 * gdcmParser constructor has a new boolean param,'ignore_shadow',
57 to allow skipping the shadow elements, to save memory space.
58 The TRUE value for this param has to be used
59 with a FALSE value for the 'enable_sequence' param.
60 ('public elements' may be embedded in 'shadow Sequences')
61 * gdcmHeader methods now deal with 'embedded icones images' in the header
62 (even when an 'icone image sequence' is announced by the
63 element (0x0088,0x0200), but there is NO icone at all ...
65 * gdcmHeader sometimes Image Location value doesn't follow
66 the supposed processor endianity (see gdcmData/cr172241.dcm).
69 * gdcmHeader add the method
70 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
71 to get *all* the Header Entries with the same tag.
72 GetHeaderEntrySameName is probabely *useless*
73 (no meaning : Name is *not* an identifier within the Dictionnary)
75 2004-01-26 Benoit Regrain
76 * Bug fix in the print of hexadecimal representations. Remove long fields
77 in the print and add a third level of print to print them
79 2004-01-23 Benoit Regrain
80 * Bug fix on field having a VR = 'UI'. Assume that is a string field
81 * Bug fix on test suite after remove the strip made on not string fields
82 * Split the IsReadable method between gdcmParser which test that the file
83 is dicom and gdcmHeader which test that it's an image file
85 2004-01-22 Benoit Regrain
86 * DicomDir : clean code, add methods, set variables in protected or private
87 * gdcmUtil : bug fix for the clean string method
89 2004-01-19 Benoit Regrain
90 * Add the use of shadow dictionaries
91 * bug fix and coding style
93 2004-01-19 Benoit Regrain
94 * src/gdcmFile.cxx : bug fix concerning the close of file
95 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
96 * Add the update of header entries using the shadow library
98 2004-01-19 Benoit Regrain
99 * removal of file gdcmHeader2.cxx
100 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
101 inheriting from gdcmParser. This split is to prepare the integration
103 * bug fix under python
105 2004-01-16 Jean-Pierre Roux
106 * removal of class gdcmHeaderEntrySet
107 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
108 * add file gdcmHeader2.cxx
109 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
111 2004-01-15 Benoit Regrain
112 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
113 entries created while parsing the header. Thus, they will be destroyed
114 when the gdcmDictSet will be destroyed
115 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
118 2004-01-15 Benoit Regrain
119 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
120 made a fatal error because of the memory release at the end of program.
121 The problem was in vtkGdcmReader::ExecuteData where we were allocate
122 some memory and vtk seems to have some problems with that.
123 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
125 2004-01-14 Benoit Regrain
126 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
127 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
128 * src/*.[h|cxx] : make changes due to class name changes
129 * gdcmPython/demo/*.py : bug fix due to method names
131 2004-01-13 Benoit Regrain
132 * src/*.[h|cxx] : coding style
133 * vtk/*.[h|cxx] : coding style
135 2004-01-13 Benoit Regrain
136 * gdcmPython/testSuite.py : test the readable flag of file for tests
137 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
138 It's lied to the stl compilation by MSVC (windows, always windows...)
139 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
141 2004-01-12 Benoit Regrain
142 * src/*.h : add comments
143 * src/gdcmDictSet.h : set the method BuildDictPath in public
144 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
145 directly setted in the source code
146 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
149 2004-01-09 Benoit Regrain
150 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
151 * setup.py : use a reference to gdcmVERSION
153 2004-01-07 Benoit Regrain
154 * Modification to compile with the distutils.
157 2003-12-10 Benoit Regrain
158 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
159 can use a gdcmHeaderHelper to load datas
160 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
161 made in the source code
163 2003-12-10 Benoit Regrain
164 * Update Windows projects and .cvsignore files
166 2003-11-12 Jean-Pierre Roux
167 *ENH gdcmHeader constructor has one more parameter (default value : false)
168 that allows the user to 'go inside' the SeQuences only
170 gdcmElValSet:Print takes it into account
172 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
173 *ENH: Update gdcmPython/CMakeLists
174 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
175 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
177 2003-11-10 Jean-Pierre Roux
178 *FIX : gdcmHeader::LoadElements is now based
179 on the ListTag listElem member,
180 not longer on the TagElValueHT tagHt member
181 *ENH : PrintPubElVal shows (temporarily) both results,
182 with the tagHt member and the listElem member.
183 (it's easier to 'see' the problems when using Printheader)
185 *FIX : old private member LgrElem is now splitted into
186 ReadLength : Length actually found on disk (updated only
187 if bug fixing is necessary), for internal
189 UsableLength : Updated by FixFoundLength, to fix a bug
190 or to allow Parser going on.
191 Will allow to re-write a kosher header when a SeQuence
192 with a length (not 0000) is found
193 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
194 because gdcmElValSet::Add does not update ListElem
197 2003-11-07 Jean-Pierre Roux
198 *FIX misstyping in Transfert Syntax name table
199 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
200 when they have an actual length (not 0000 nor FFFFF)
201 (Nobody should care of it, but DICOMDIR explorers)
203 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
204 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
206 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
207 *ENH: vtkGdcmReader now supports LUT !
208 (vtkgdcmViewer for now is not able to use them though)
210 2003-11-05 Jean-Pierre Roux
211 * in testSuite.py : new files names for checking the package
212 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
213 that returns the pixel area size to the *aware* (vtk) user
214 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
216 2003-11-05 Benoit Regrain
217 * in testSuite.py : Modify the rules for checking the paths
218 : Explicit error messages
219 * in __init__.py : Related modif
221 2003-11-03 Jean-Pierre Roux
222 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
223 to be used by aware (vtk) users that want to manage
224 LUT (and no to turn the PALETTE image into an RGB pixels one)
225 * GetPixelType now returns 8U for 24 Bits images
226 (vtkGdcmReader compliant)
228 2003-10-31 Jean-Pierre Roux
229 * Removal of *all* gdcmData images and add them again
230 in order to loose the 'history' of un-anonymised images
232 2003-10-31 Jean-Pierre Roux
233 *RMV : removal of useless jBitsInJsample.h
234 for both 8 and 12 Bits JPEG Lossy Libraries
236 2003-10-31 Jean-Pierre Roux
237 * ENH : Add the functions gdcmFile::GetImageDataRaw
238 gdcmFile::GetImageDataIntoVectorRaw
239 that act as GetImageData and GetImageDataIntoVector
240 except the making of an RGB Plane from Gray Plane + LUT
241 Intended to aware (vtk) users who know how to manage
244 GetLUTRGBA return a R,G,B,A LUT if any
245 lgrTotaleRaw gives the 'Raw' length
246 GetImageDataRaw returns the gray Plane
247 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
248 (They stay Grey, just like with other Dicom viewers :-(
250 2003-10-30 Jean-Pierre Roux
251 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
253 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
254 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
255 being coherents dicom files.
257 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
258 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
260 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
261 *ENH: Two steps is necessary to please VC++ compiler...
262 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
263 *ENH: Add include dir to medcon lib
264 *FIX: only one function is being exported for now !
265 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
267 2003-10-29 Jean-Pierre Roux
268 * adding gdcmHeader::GetLUTRGBA
269 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
270 --> Mathieu, the modif u're waiting for is not yet committed
271 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
273 2003-10-27 Jean-Pierre Roux
274 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
275 . 00191113.dcm DermaColorLossLess.dcm
276 MxTwinLossLess.dcm RadBWLossLess.dcm
277 * ENH: For version prior to vtkImageViewer2 -r 1.19
278 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
280 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
281 * Removal of ido stuff in CMakeLists.txt
283 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
284 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
285 * FIX: remove a call to ->Modified ... see comments
286 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
288 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
289 * FIX: Problem with path for libvtkgdcmPython
290 * ENH: Try adding a search script for python site-package
291 * RMV: Remove some file from medcon lib that are not necessary
292 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
293 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
294 * FIX: More pragma disable fro VC++,
295 I don't think I break something as it is also disable in VTK/ITK.
296 But it fasten debug compilation time.
298 2003-10-23 Jean-Pierre Roux
299 * gdcm now deals with 16 Bits Run Length Encoded images
300 (they are compressed as 2 planes images,
301 one for the high Bytes, the other for low Bytes)
303 2003-10-22 Jean-Pierre Roux
304 * Now CheckRead takes into account :
305 the bugged 'Leonardo' Siemens images
306 the XA images, sent thru the burning VPRO station
307 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
310 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
311 * FIX: When copying a Makefile.am to CMakeLists.txt
312 one should remove the '\'
314 2003-10-22 Jean-Pierre Roux
315 * in gdcmData adding a bugged 'Leonardo' Siemens image
316 (wrong lengths in header)
317 OK with gdcm, KO with the other viewers :-)
318 * add a GE dlx XA image, thru the VEPRO burning station
321 2003-10-21 Jean-Pierre Roux
322 * in gdcmData add the checkvtkgdcmViewer.sh shell script
323 for a brutal checking of vtkgdcmViewer compliance
325 2003-10-21 Jean-Pierre Roux
326 * add the files for 'xmedcon' Jpeg Lossless library
327 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
329 2003-10-21 Jean-Pierre Roux
330 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
332 2003-10-21 Jean-Pierre Roux
333 * garbage Siemens 'Leonardo' images dealt with
334 (the patch is easy to remove)
335 * cosmetic changes to avoid warnings
337 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
338 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
339 no need to press 'r' now.
341 2003-10-20 Jean-Pierre Roux
342 * upgrade of checkRead.sh checkWrite.sh according
343 to new Jpeg Lossless decompressor
344 * add US.3405.1.dcm, a genuine RGB medical file ...
345 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
346 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
348 2003-10-15 Jean-Pierre Roux
349 * general anonymisation in gdcmData
350 * adding the 'color files' from
351 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
352 * adding some well knowed bugged-header images
353 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
354 waiting for their inclusion in Python testsuite
356 2003-10-15 Jean-Pierre Roux
357 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
358 no longer seg faults when file is not found
360 2003-10-14 Jean-Pierre Roux
361 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
363 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
364 * TODO: *.in file to genereate a UseGDCM later
366 2003-10-14 Jean-Pierre Roux
367 * Some supposed-to-be Dicom Images have no preamble.
368 OpenFile takes it into account
369 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
370 * Missing elements added in dicomV3.dic
371 (just to be affraid : have a look at
372 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
373 and do it again next year ;->
375 2003-10-13 Jean-Pierre Roux
376 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
377 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
378 But there are NOT. It's fixed !
380 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
381 * FIX: "jpeglib.h" was not found on VC++
382 * FIX: vtkgdcm was not being installed
384 2003-10-10 Jean-Pierre Roux
385 * ENH : OpenFile closes the file if it *really* doesn't look like
386 an ACR-NEMA / DICOM one.
387 * FIX : testWrite no longer writes an empty file if the source file
389 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
392 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
393 * FIX: CMake generate now documentation
394 * ENH: out of source doc build !
395 * ENH: Generate both user and dev documentation
396 * ENH: Should work on windows too
397 * ENH: Only one doxygen config.in file is needed
398 * FIX: make install should be ok now on ùnix plateform
399 * FIX: PATH to dictionary was wrong (missing /)
400 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
402 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
403 * vtkGdcmReader is now able to read rgb dicom file.
404 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
405 * added a gdcmViewer to vtk test, use mouse to control
406 window level & window width
408 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
409 * CMake-ification of gdcm, we have now two build system
410 * FIX: on cygwin Wsock32 doesn't exist
411 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
413 2003-10-06 Emanuel Ollart
414 * FIX : compilation process wad broken.
415 Changed gdcmViewer_sources to vtkgdcmViewer_sources
417 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
418 * change gdcmViewer -> vtkgdcmViewer
419 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
421 2003-10-06 Jean-Pierre Roux
422 * FIX :A few nasty patches to allow the reading of a lot of nasty images
423 ( e.g : well known GE images with a wrong elem length,
424 : Philips MRI Images with a wrong Huffman table)
425 * still to be done : allow the reading of bugged LEONARDO Siemens images
427 2003-10-03 Jean-Pierre Roux
428 * Odd length strings are padded with '\0' (not with spaces,
429 to remain compliant with already defined strings,
430 like Transfert Syntax UID and others)
432 2003-10-03 Jean-Pierre Roux
433 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
434 to allow displaying RGB images (not only by affim ;-)
436 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
437 * vtkGdcmReader is now able to read rgb dicom file.
438 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
440 2003-10-03 Jean-Pierre Roux
441 * A few nasty patches to allow the reading of a lot of nasty images
442 ( e.g : well known GE images with a wrong elem length,
443 : Philips MRI Images with a wrong Huffman table)
444 * still to be done : allow the reading of bugged LEONARDO Siemens images
446 2003-10-03 Jean-Pierre Roux
447 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
449 2003-10-03 Jean-Pierre Roux
450 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
451 to allow displaying RGB images (not only by affim ;-)
453 2003-10-03 Jean-Pierre Roux
454 * gdcmFile::GetImageDataIntoVector now
455 - deals with MultiFrames MultiFragments Run Length Encoded files
456 - deals with YcBcR (YBR_FULL) files
457 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
458 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
461 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
462 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
463 Two reasons: - clear things
464 - third parties acces gdcm through header files, so won't
465 suffer anymore VC++ complains
466 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
467 * add argv[1] in testvtkGdcmReader.cxx
470 2003-09-24 Jean-Pierre Roux
471 * The lines are now eigthy characters long.for
472 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
474 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
475 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
476 char* to std::string. Thus, the use of strdup becomes useless. (see
477 previous commis of Malaterre)
478 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
479 before the last Malaterre's commit.
481 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
482 * This commit should fix the Debug building under VC++, the problem
483 was mainly a mixture of debug and release lib being loaded at startup.
484 * I also remove a depency to a specific C function: strdup. Because I had
485 to force the link to msvcrtd (whereas strdup is in libc).
487 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
488 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
489 located in the gdcmCommon.h file. All use of reference of tha has been
490 changed to now use the variable GDCM_UNFOUND.
492 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
494 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
495 Dicom dictionary. The test suite can now be run again. Note:
496 I'm note very happy with the " (RET)" changes. I believe this
497 RETAINED comment should be dropped when parsing the dictionary.
500 - AUTHORS updated and now in alphabetical order
501 * Makefile.am now exports gdcm.dsw for Windoze users.
503 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
504 * cygwin complains about missing std:: in subdir Test/
506 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
507 * remove some methods that are now in gdcmHeaderHelper
509 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
510 * vtkGdcmReader set spacing and origin correctly
512 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
513 * Fix a few delete/delete[] mismatch
515 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
516 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
517 interpretation to data given by gdcmHeader. For instance there are
518 heuristics to get informations (look at different places).
519 * it also include a specific class: gdcmSerieHeaderHelper devoted to
520 sorting DICOM images based on different strategies.
521 * modified Makefiles accordingly.
523 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
524 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
525 when building in debug mode
526 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
527 src/win32/gdcmdll.dsp
528 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
530 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
531 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
533 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
534 * src/win32/libgdcmjpeg12.dsp was not dos format
535 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
536 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
538 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
539 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
541 * src/gdcmFile.cxx : bug fix in affectation type
542 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
543 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
544 * Modifs of MVSC projects to compile them. Not concerning 2 identic
545 symbols... future problem ?
547 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
548 * src/win32/libgdcmijpeg12.dsp was missing
549 * modified gdcm.dsw accordingly
551 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
552 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
554 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
555 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
556 commit of JPR (before his hollidays to facilitate our work).
557 * setup.py : bug fix in code. Modifications made while the last commit
558 of JPR. The code hasn't been tested before the commit... it's so
559 useless to make that (for best programmer that is JPR) !!!
561 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
562 * tagged the current version as Version0_3 (i.e. version 0.3)
564 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
565 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
566 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
567 * *.dsp : modifications to use new libgdcmijpeg8 library
568 * setup.py : bug fix on VTKPATH variable
569 * PACKAGER : adding all concerning windows
571 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
572 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
574 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
575 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
576 test suite reported error.
577 * PACKAGER file added (describes what a packager must do when
578 packaging a new release).
579 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
580 * configure.in: upgraded version number to 0.3.0
581 * fixing build of rpm (through rpm -ta):
582 - Doc/Makefile.am exports proper doxygen files
583 - src/jpeg/libijg8/Makefile.am exports the include files.
585 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
586 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
587 * src/gdcmHeader.h : formatting code
589 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
590 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
591 We were obtaining error message from vtk. Now, creation of file list
592 is made in an internal list to prevent this problem.
593 Bug fix when output is empty.
594 Bug fix in update of progress value. Previous commit for this was a bad
596 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
598 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
599 * src/gdcmHeader.h : added method to get the file name
600 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
601 files. Added method to remove all files on the input
602 Added FIXME comment concerning the bad parsing of header made by
603 ExecuteInformation method (in ExecuteData method)
605 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
606 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
607 when using make instal.
608 * src/gdcmFile.cxx : bug fix under Window after JPR commit
609 RQ : the JPR doesn't appear in the ChangeLog... normal for him
611 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
612 * setup.py : adding include dir of jpeg lib to compile all sources
613 * */Win32/*.dsp : JPR fix for windows compilation
615 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
616 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
618 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
619 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
621 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
622 * setup.py is again effective on un*x (takes into account the
623 addon of the jpeg library)
624 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
625 * Doc/Doxy* updated (includes above enhancements)
626 * INSTALL now points to web documentation
628 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
629 * src/gdcmHeader.h doesn't make unnecessary reference to
631 * gdcmPython/Makefile.am now avoids calling the wrappers for the
633 * src/gdcm*.[cxx|h] :
634 - to allow compilation with gcc 3.x
635 -- clean up of STL usage (added explicit usage of std::)
636 -- small fixes on exceptions.
637 Note: linking not tested !
638 - clean of doxygen comments to avoid warnings at documentation
640 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
641 dependent convertion).
643 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
644 * Clean up of previous JPR garbage commit (not even commented in the
646 - Test/Makefile.am removed the reference to unexisting testTS.cxx
647 - moved all jpeg related files from src to src/jpeg/libijg8, with
648 addition/modification of Makefile.am and configure.in.
649 - the testSuite is still brain damage (not guilty).
651 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
652 * WrapVTK.py : modifications to get correctly vtk source files to
654 * vtk/vtkGdcmReader.cxx : modification for an already existing name
655 (FileName -> Filename)
657 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
658 * vtk/vtkGdcmReader.[cxx/h]:
659 - UpdateProgress method should now be effective
660 - removed the limitation on having only images loaded (as opposed
662 - when building a stack of images/volume, a lesser number of
663 gdcmHeader and gdcmFile instances should be used (hopefully
664 accelerating things).
665 - when building a stack of images/volumes, files which are not
666 loadable (wrong path-filename, wrong permissions on existing file,
667 or file not parsable by gdcm) are replaced with a black image
668 in the stack (for the caller to notice the problem).
670 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
671 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
673 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
674 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
675 between standard library (std) and vtk library (problems are found
676 under Windows... thanks Windows !)
678 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
679 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
681 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
683 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
684 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
686 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
687 * When compiling with distutils (see setup.py) the C++ compiler is
688 called with different flags than the default ones (with automake).
689 In order to fix all those warning, I compiled gdcm with the command
690 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
691 and went for warning fixes:
692 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
693 up from unused variables.
694 - vtk/vtkGdcmReader.cxx: potential bug fix.
695 * src/gdcmHeader.h: Doxygen warning cleanup
697 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
699 - typemaps correction to take into account the systematic replacement
700 of "using namespace std" with std:: prefix e.g. std::list,
701 std::string... (cf changes of 2003-05-21).
702 - gdcmGlob global variable of type gdcmGlobal (defined in
703 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
704 exported to Python a as cvar.
705 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
706 and GetPubDictTagNamesByCategory() as a replacement for deprecated
707 gdcmDictSet.GetPubDictTagNames() and
708 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
710 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
711 with the above changes.
713 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
714 * setup.py, manifest.in : bug fix under linux
716 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
717 * Modification of setup.py to compile vtk part too. Then, we have 2
718 wrappers which must work with same distutils. For that, we have a
719 generic distutils in distusiltsWrapping.py ; with :
720 - build_extWrap class to wrap generically all extensions,
721 - ExtensionWrap base class for all wrapping extension that contains
723 - Wrapper interface which wrap sources
724 + In WrapSwig.py we have extension and wrapper for Swig
725 + In WrapVTK.py we have extension and wrapper for VTK
726 * MANIFEST.in : modifications to consider vtk directory and new python
727 files for compilation
729 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
730 * Added python wrappers of vtkGdcmReader vtk class (see the
731 source in vtk/vtkGdcmReader.cxx) :
732 - vtk/Makefile.am now builds a library
733 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
734 python library (as opposed to _gdcm.so wich are the python
735 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
736 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
738 - configure.in has an additional flag --enable-vtk that needs
739 to be set to enable compilation of vtk related code, that is:
740 + vtk/vtkGdcmReader.so and
741 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
742 + gdcmPython/vtkgdcmPython.so (see above)
743 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
744 be read when compressed or when HighBit + 1 != BitsStored),
745 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
746 the usage of the python wrapper of vtkGdcmReader vtk class.
747 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
748 * src/*.[h] all occurences of stl classes are now prefixed with
749 std::, and all occurences of "using namespace std;" where removed.
750 This is to avoid pollution of global namespace in included files.
751 Apparently vtk does not avoid this pitfall: when using both
752 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
753 collision of various stl members (principally cout...).
754 * gdcmPython/testSuite.py now cleanly removes temprory generated
756 * gdcmPython/gdcm.i now declares a typemap for std::string (to
757 comply with above changes)
759 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
760 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
761 * vtk/vtkGdcmReader.cxx now properly inports the image in the
762 vtk data structure (an image Flip was required).
763 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
764 * cosmetic changes in documentation.
766 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
767 * src/gdcmHeader.cxx: the constructor no longer exits when an
768 unexisting file is given as argument.
769 * The subdirectory Data (containing all the images used for the
770 test suite) is not part of this repository anymore. A new module
771 containing those images is now available at
772 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
773 with the name gdcmData.
774 All the python scripts (including the package initialisation file
775 gdcmPython/__init__.py) were adapated to take this change into
776 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
778 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
779 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
780 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
781 demo of the usage of this class.
782 Compilation of this vtk part is only done when using the --enable-vtk
783 at configure (or autogen.sh) stage.
785 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
786 * More memory link related corrections and documentation fixes.
788 - maximum info is obtained with a command of the form:
789 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
790 --show-reachable=yes PrintHeader
791 - the remaining reachable blocks seem to come from the STL
792 allocation scheme through the usage of map and list. It looks
793 like this memory cannot be freed but it is not a memory leak
794 (in fact further invocation to the STL would recollect the
795 unused memory allthough it cannot explicitely be freed).
796 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
797 of displaying an image parsed with gdcm and displayed with VTK.
798 Note: some images don't seem to work e.g.
799 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
800 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
801 Allthough this weakens the semantics, it is a ditch attempt to
802 make gdcm more thread friendly.
804 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
805 * Memory link hunt (by using valgrind through the command
806 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
807 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
808 gdcmHeader::_dicom_vr.
809 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
810 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
812 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
814 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
815 * src/Makefile.am now exports all the necessary include files at
819 * UpdateGroupLength replaced by new one
822 * UpdateGroupLength re-written using H-Table
823 (named UpdateGroupLengthNew untill checks are over)
825 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
826 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
827 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
829 - gdcmHeader::GetPubElValSet removed.
830 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
831 UpdateGroupLength, WriteElements, Write.
832 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
833 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
834 carried the same semantics.
835 - src/gdcmHeaderIdo.cxx changed accordingly.
836 - gdcmFile::WriteBase now regroups all the codes from previous
837 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
838 - enum FileType moved to gdcmCommon.h
839 * src/gdcmHeader.cxx AddDefault trashed
841 * getimageDataSize now calls gdcmGetXSize
842 * Test/*.cxx changed to agree with above changes
844 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
845 * src/gdcmHeader.h: LoadElements() is not a public method anymore
846 (to avoid double call by end user).
847 * Test/*.cxx LoadElements() doesn't need to be called explicitely
848 by end user, since gdcmHeader::gdcmHeader now handles it.
850 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
851 * gdcm/Doc many doxygen changes:
852 - Doxyfile now has two different versions, DoxyfileUsers that generates
853 the html.users end users oriented documentation and
854 DoxyfileDeveloppers that generates the html.developper developper
855 oriented documentation.
856 - README changed accordingly
857 - requirement.txt removed (old design info moved to TODO).
858 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
859 DoxyMainPage.txt, DoxyPython.txt provide more information.
860 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
861 be updated by simply regenerating the docs with doxygen and copying
862 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
863 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
864 all the tests in the form "if (<map>.count() >1)" were removed.
865 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
866 ill-formed documentation sections.
867 * src/gdcmHeader.cxx: ditto
869 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
870 * setup.py fixed for un*x (needed macro for stdint.h)
871 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
872 un*ces with sh-utils test utility.
873 * gdcmPython/demo/test.py renamed to PrintHeader.py
874 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
875 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
876 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
877 * src/gdcm*.cxx JPR's bad inclusion fixed.
879 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
880 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
881 * gdcmPython/demo/test.py changed accordingly.
883 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
884 * gdcmPython/Makefile.am fixed linking against libstdc++
885 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
886 * Swig subdir (historical tests of swig version 1.3.17++) removed
887 * Test/testChangeEntete.cxx some lines commented out in order to make
889 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
890 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
892 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
893 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
894 hence the user doesn't need this explicit call.
895 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
896 i.e. LoadElements() call removed.
897 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
898 - src/Makefile.am declares the proper flag for g++.
899 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
900 for adding user defined new tags.
901 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
902 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
903 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
905 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
906 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
907 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
908 src/Makefile.am : the project should properly compile and install
909 with the autotools, included the python wrappers part.
910 * gdcm.spec.in : added a spec file for RPM packaging.
912 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
913 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
915 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
916 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
917 to exported to the environement (see gdcmPython/testSuite.py
919 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
920 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
921 ElValue class renamed to gdcmElValue for obvious consistency reasons.
922 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
923 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
925 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
926 * gdcmPython/__init__.py doesn't crash anymore when running in
927 in InstallMode or PreInstallMode but with an environement given
928 value of GDCM_DICT_PATH.
929 * src/gdcmDictSet.[cxx/h] coding style.
931 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
932 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
933 * src/gdcm.h general comments moved to TODO, and README
934 * src/gdcm.h should now be seen as a user commodity (including it
935 should suffice to fully use gdcm). It is nowhere including within
936 any of the kernel files src/*.cxx and src/*.h.
938 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
939 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
940 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
942 * src/gdcm*.cxx only include their corresponding include file
943 (as opposed to gdcm.h)
944 * gdcmPython/gdcm.i changed accordingly
945 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
946 the autogen.sh generated "make snapshot" command to work.
947 * autogen.sh removed history related references to crea package.
949 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
950 * distutilsSwigCPlusPlus.py work around some swig portability
953 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
954 * Eventually, python/gdcmPython was renamed to gdcmPython. This
955 was done in a last ditch attempt to get setup.py _really_
956 operationnal. The python/gdcmPython layaout add the advantage
957 of hidding away the python related distutils specific files
958 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
959 Alas, the src directory was out of scope (i.e. it's relative
960 position to setup.py was ../src) which made things impossible to
961 handle (see previous version of python/setup.py). Crossing fingers...
963 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
964 * python/setup.py now works on Un*x. (harder than I thougth)
965 * python/distutilsSwigCPlusPlus.py can now have include files
966 among the list of sources.
968 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
969 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
970 * modifications in MSVC projects
972 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
973 * As stated by the first lines of Test/ExceptionAndPython/README, it
974 looks like we can move back to original usage of exception within
975 src/gdcm* and hence remove the errno stuff that was introduced
976 as a quick and dirty fixture of this problem (added to the TODO).
977 * Doc/Doxyfile configuration file for Doxygen and corresponding
978 README file for usage added.
979 * Test/testWrite.cxx added. This new test comes from a split of
980 test.cxx that is now reverted to its original purpous i.e.
981 testing the proper parsing of a Dicom related file.
982 testWrite.cxx concentrates on testing the IO part of gdcm.
983 * Test/bug1.cxx (containing a bug on WIn32) added.
984 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
985 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
986 whose purpose is to publish the content of the TagNames of the
987 Dicom public dictionnary were not accessible without an
988 instance of class gdcmHeader.
989 - those methods are now static methods of gdcmDictSet and hence
990 require no instances at all to be invocated.
991 - within gdcmDictSet this change required to change some method
992 to class methods (i.e. are now static) among which SetDictPath
993 (renamed to BuildDictPath) and LoadDefaultPubDict.
994 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
995 the above changes by calling the new method classes of gdcmDictSet.
996 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
997 the above to be effective.
998 * python/gdcmPython: in order to wrap properly the above changes
999 for Python, swig version now needs to be > 1.3.17.
1000 * python/gdcmPython/Makefile fixed to adapt itself to new
1001 configure/make shema introduced by Johan Montagnat (thanks for the
1002 contribution). Alas this Makefile cannot be turned into a proper
1003 Makefile.am without some heavy changes in the configure.in
1004 (for python dectection).
1005 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1006 now avoids publishing the empty entries.
1008 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1009 * python/setup.py : bug fix concerning install under windows
1010 ExtraPath reused :-P
1011 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1013 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1014 * Dicts/dicomV3.dic : remove double spaces !!!
1015 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1016 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1019 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1020 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1021 method. Doxygenation.
1022 * src/gdcm.h clean up of JPR spurious comments.
1024 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1025 * python/distutilsSwigCPlusPlus.py now properly collects the
1026 shadow classes generated by "swig -c++" (gdcm.py in our case)
1027 when using "python setup.py install".
1028 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1029 reexports the working classes.
1030 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1031 by the classical C errno scheme. This is to prevent an obscure
1032 behavior of the python wrappers when importing wxPython.wx prior
1033 to gdcmPython (which ended up in an abort call). An illustration
1034 of this oddity can be found in the Test/ExceptionAndPython
1035 subdir (see the README file). This problem probably due to
1036 an combination of g++ and dynamic loading.
1037 * added Test/ExceptionAndPython (see above)
1039 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1040 * Changed the layout of the python part to avoid bloating main
1041 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1042 i.e. the distutils arsenal. All the python related stuff is
1043 again in a python subdir, but the package itself is now in
1045 * setup.py was cleaned up:
1046 - pythonIncludePath removed
1047 - python setup.py bdist target is now functional.
1048 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1049 collision with other packages). gdcmPython/demo/*.py changed
1052 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1053 * python subdir moved to gdcmPython (preparation of distutils packaging).
1054 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1055 distutils installer is operational.
1056 * - gdcmPython/__init__.py now properly loads the swig generated
1057 shadow classes (from gdcm.py).
1058 - gdcmPython/demo/*.py changed to import the package gdcmPython
1059 instead of gdcmPython/demo/load.py.
1060 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1062 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1063 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1064 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1065 entries within the associated public Dicom dictionary resp. the same
1066 information but sorted by the fourth field (PAT, IMG, DIR) of the
1068 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1069 are now in the "???" group.
1070 - python/gdcm.i changed accordingly,
1071 - python/demo/printGroupedPublicDict.py added, that gives an example
1072 of the above new functionalities in Python.
1074 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1075 * src/gdcm.h, gdcmHeader.cxx:
1076 - historic references to glib's g_malloc and g_free (#defined)
1077 were definitively removed.
1078 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1079 * src/gdcmElValSet.cxx:
1080 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1081 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1082 - GetElValue(string) renamed to GetElValueByName.
1083 - Added GetElementByName(string).
1084 * src/gdcmHeader.cxx: added
1085 - GetPubElValRepByNumber(guint16, guint16)
1086 - GetPubElValRepByName(string)
1087 - GetShaElValRepByNumber(guint16, guint16)
1088 - GetShaElValRepByName(string)
1089 - GetShaElValByNumber(guint16, guint16)
1090 - GetShaElValRepByName(string)
1091 - GetElValRepByNumber(guint16, guint16)
1092 - GetElValRepByName(string)
1093 - GetElValByNumber(guint16, guint16)
1094 - GetElValRepByName(string)
1095 * Doc/requirements.txt added.
1097 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1098 * Test/Makefile building now depends on the one of libgdcm.so
1099 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1100 pixel data) aware which enables finding the address (offset) of
1101 the pixel data of JPEG encoded DICOM files. This leaves only a single
1102 file in the testSuite whose pixel data address (offset) is unknown.
1103 * python/testSuite.py changed accordingly.
1105 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1106 * VC++ has some strong limitations when working with the STL, as stated
1107 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1108 "Also note that some STL containers (map, set, queue, list, deque)
1109 cannot be exported. [...]
1110 Some STL classes contain nested classes. These classes can not
1112 This is caused by a designed limitation that once a template
1113 class is instantiated, it can not be re-instantiated and
1115 Since our usage of map<> is ubiquitous in gdcm, this "designed
1116 limitation" of VC++ is a pitfall.
1117 Hence the Python wrappers of gdcm cannot be incrementally linked
1118 against the c++ dynamic library. The dirty but only workaround is
1119 to forget about incremental link of dynamic libraries and to generate
1120 the Python wrappers library with the inclusions of the underlying C++
1122 The following modifications concern this matter on Win32/VC++:
1123 - wrapping python correct with standalone wrapped dll (don't use separate
1124 dll under windows !!!!)
1125 - python21_d debug mode enabled (ask Frog how to use it :-)
1126 - NO problem with having an STL member of class for example string in C++
1127 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1128 - Python test of dcmlib in Python is ok under windows on a large set
1130 * removed glib references
1131 * typedef's inserted in gdcm.i for correct swig type management
1133 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1134 * python/demo/*.py load.py extracted from test.py. Added explore.py
1135 that only displays required tags and testAll.py that parses all
1136 the files of the testsuite without using unittest.
1137 * python/testSuite.py other additional test on new files added.
1138 * Data/* new test files added accordingly to the testSuite.
1139 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1140 the vr in the file differs from the one of the dictionary.
1142 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1143 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1144 values, but limits itself to values which are below a user specified
1145 size (by default 1024 bytes).
1146 * python/gdcm.i : elements not loaded (because their size is above the
1147 user specified treshold) are exported with their TagKey as key of the
1148 python dictionary. This enables the testsuite to make some checks
1149 on the unloaded elements (since we have their offset and size).
1150 * python/testSuite.py
1151 - now tests for the existence and proper value of the pixel data
1152 - two new examples added.
1153 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1155 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1156 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1157 aware. See the strategy comments in gdcmHeader::FindeLength().
1158 * Test/test.cxx now accepts a filename as first argument.
1159 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1160 * python/testSuite.py changed to integrate test on above files.
1162 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1163 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1164 the vr was also RET.
1165 * python/testSuite.py more tests added.
1167 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1168 * python/testSuite.py unittest test suite added (uses Data)
1169 * Data/* dcm and acr files for the test suite.
1170 * glib dependance removed from un*x version. We now use ISO C99
1171 7.18 Integer types (see stdint.h)
1172 - python/Makefile, src/Makefile src/gdcm.h
1173 * src/ when an explicit vr (like dicom files) suddenly poped an
1174 implicit element we use to mark the underlying DictEntry of the
1175 concerned ElValue with "Implicit". This strategy was damageable
1176 too the public or provite dictionaries, since some of their vr
1177 would be changed. Since Header::FindLength heavily relies on the
1178 detection by Header::FindVR of falsely explicit elements, I
1179 added an extra ImplicitVr member to ElValue (boolean).
1180 The rest of the changes we the necessary adaptations.
1182 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1183 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1185 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1187 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1188 * Adaptation for porting to VC++:
1190 o forced to use std namespace (for string to be known)
1191 o all class use __declspec export style on WIN32
1192 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1193 (in stdlib.h on Win32 but in std:: for gcc)
1194 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1195 variable GDCM_DICT_PATH.
1196 * src/gdcmHeader.cxx verbose comments made discrete.
1198 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1199 * python/gdcm.i: added a typemap that converts a C++ hashing table
1200 to native Python dictionary.
1201 * python/demo/test.py:
1202 - now uses the native dictionary for exploration of gdcmHeader.
1203 - takes an optional filename argument (the file to parse).
1204 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1205 PubElVals hashing table.
1206 * Dicts/dicomV3.dic removed error prone trailing spaces.
1208 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1209 * Python wrapping process moved away from src/Makefile to
1210 newly created python/Makefile (as well as gdcm.i)
1211 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1212 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1213 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1214 from the environement variable GDCM_DICT_PATH (when existing).
1215 * src/gdcmDict::GetTag bug fix.
1217 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1218 * Straightforward temporary fixes for swig to build the python wrappers.
1219 src/Makefile now has a python working entry [by working we mean
1220 that we can import de shadow classes without errors].
1222 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1223 * hashtest.cxx removed (since allready in Test)
1224 * src/gdcmlib.h renamed to src/gdcm.h
1225 * src/dcm.i renamed to src/gdcm.i
1226 * src/Makefile prepared for python wrapping
1228 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1229 * src/gdcmHeader.cxx :
1230 - Parsing of header is now separated from loading of element values
1231 (see gdcmHeader::LoadElements).
1232 - general clean up of hopefully all file access (creation of
1233 ReadInt16 and ReadInt32)
1235 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1236 * src/gdcmHeader.cxx :
1237 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1239 - SetLgrElem renamed to SetLength
1240 - GetLgrElem renamed to GetLength
1241 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1242 * src/gdcmElValSet.cxx fixed both GetElValue methods
1243 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1244 due to IdoDude was cleaned out.
1246 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1247 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1248 concentrates on finding the value representation (when it exists).
1249 RecupLgr now only finds the element value length, and it avoids
1250 returning the unecessary skL (skipped length).
1251 Also, offsetCourant was simply removed (with taille_fich) since
1252 it was redundant with the File position internals (by using
1253 ftell and fseek). This also made skL (see above in RecupLgr) usage
1255 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1256 on the libido specificities which are handled through class
1258 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1261 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1262 * Truckload of changes. Parsing of header is barely functional
1263 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1265 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1266 * src/gdcmHeader.cxx many addons of low level methods
1268 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1269 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1270 and _IdDcmSWAP_LONG.
1272 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1273 * This corresponds to all the changes decided at the meeting of
1274 May 23 2002. Needless to say we are running late...