1 2004-02-03 Benoit Regrain
2 * gdcmDirList : to parse a hard drive directory in recursive (or not)
3 * gdcmDicomDir : add the load of directory
4 * Bug fix and print add-on
6 2004-02-03 Jean-Pierre Roux
7 * ENH gdcmParser : allows "DICM" files, with NO group '0002'
8 * FIX handling 'non string elements' unsecure area (LUT, overlays, etc)
9 * FIX Dicts/dicomV3.dic : Add a few missing 'group length' Elements
10 * FIX gdcmParser.cxx : 'group length' elements are now considered
11 as integers, even for shadow groups, when file is Implicit VR
13 2004-02-02 Jean-Pierre Roux
14 * FIX : gdcmWrite : equal_range() for multimap doesn't return a 'second'
16 of the last synonym :-(
17 * FIX : gdcmWrite::WriteBase : method stops if Pixels not yet Read (except
19 * ENH gdcmData/checkWrite.sh :modif for full check of Explicit VR writting
20 * FIX taking into account the possible 7fe0,0010 multiplicity
21 * FIX add GRPixel,NumPixel,countGrPixel (gdcmParser protected members)
22 to allow removal of references to 7fe0,0010, to deal with
23 ACR-NEMA images, when 0028,0200 is meaningfull
25 2004-01-31 Jean-Pierre Roux
26 * FIX gdcmParser::WriteEntries : when a VR is tagged as 'Unknown'
27 no longer writes 'Un' on disk
28 * FIX SQ elements with actual length are now dealt with corectly
29 * FIX gdcmFile::WriteBase make the difference, for color images, between
30 the length (for Palette expanded omages)
31 and Raw Length (non expanded image + Palette)
32 * FIX Dicts/dicomV3.dic : removal of 'CTX' (context dependant) VR
33 (that broke Write). Replaced by UL.
34 Aware user will reload the field if he
35 thinks it's necesssary
37 2004-01-30 Jean-Pierre Roux
38 * gdcmParser::CheckSwap() now defaults the filetype to ACR
39 when 'dirty Acr' is found, to be compliant with the new
42 * gdcmHederlHelper :add Pixel Type 'FD', for dealing with 'double' images.
43 (no DOUBLE images in kosher DICOM,
44 but so usefull for people that miss them ;-)
46 * add Test/testDicomDir.cxx, Test/makeDicomDir.cxx , Test/explDICOMDIR.cxx
47 DICOMDIR related utilities (not checked as Windoze compliant)
49 2004-01-28 Jean-Pierre Roux
50 * upgrade GdcmHeaderEntry Print Method for DICOMDIR
52 2004-01-27 Jean-Pierre Roux
53 * gdcmParser constructor has a new boolean param,'ignore_shadow',
54 to allow skipping the shadow elements, to save memory space.
55 The TRUE value for this param has to be used
56 with a FALSE value for the 'enable_sequence' param.
57 ('public elements' may be embedded in 'shadow Sequences')
58 * gdcmHeader methods now deal with 'embedded icones images' in the header
59 (even when an 'icone image sequence' is announced by the
60 element (0x0088,0x0200), but there is NO icone at all ...
62 * gdcmHeader sometimes Image Location value doesn't follow
63 the supposed processor endianity (see gdcmData/cr172241.dcm).
66 * gdcmHeader add the method
67 IterHT GetHeaderEntrySameNumber(grPixel,numPixel);
68 to get *all* the Header Entries with the same tag.
69 GetHeaderEntrySameName is probabely *useless*
70 (no meaning : Name is *not* an identifier within the Dictionnary)
72 2004-01-26 Benoit Regrain
73 * Bug fix in the print of hexadecimal representations. Remove long fields
74 in the print and add a third level of print to print them
76 2004-01-23 Benoit Regrain
77 * Bug fix on field having a VR = 'UI'. Assume that is a string field
78 * Bug fix on test suite after remove the strip made on not string fields
79 * Split the IsReadable method between gdcmParser which test that the file
80 is dicom and gdcmHeader which test that it's an image file
82 2004-01-22 Benoit Regrain
83 * DicomDir : clean code, add methods, set variables in protected or private
84 * gdcmUtil : bug fix for the clean string method
86 2004-01-19 Benoit Regrain
87 * Add the use of shadow dictionaries
88 * bug fix and coding style
90 2004-01-19 Benoit Regrain
91 * src/gdcmFile.cxx : bug fix concerning the close of file
92 * src/gdcmParser.[h|cxx] : remove obvious Pub informations
93 * Add the update of header entries using the shadow library
95 2004-01-19 Benoit Regrain
96 * removal of file gdcmHeader2.cxx
97 * split class gdcmHeader into gdcmParser and gdcmHeader, with gdcmHeader
98 inheriting from gdcmParser. This split is to prepare the integration
100 * bug fix under python
102 2004-01-16 Jean-Pierre Roux
103 * removal of class gdcmHeaderEntrySet
104 * removal of files gdcmHeaderEntrySet.cxx, gdcmHeaderEntrySet.h
105 * add file gdcmHeader2.cxx
106 * add method gdcmHeader::SetPrintLevel (for PrintHeader)
108 2004-01-15 Benoit Regrain
109 * src/gdcmDicSet.[h|cxx] : add virtual entries to have a reference of
110 entries created while parsing the header. Thus, they will be destroyed
111 when the gdcmDictSet will be destroyed
112 * src/gdcmHeader.cxx, gdcmHeaderEntrySet.cxx : uses virtual entries of
115 2004-01-15 Benoit Regrain
116 * vtk/vtkGdcmReader.cxx : bug fix : before, with python only, the program
117 made a fatal error because of the memory release at the end of program.
118 The problem was in vtkGdcmReader::ExecuteData where we were allocate
119 some memory and vtk seems to have some problems with that.
120 * src/gdcmHeaderEntrySet.cxx : bug fix for std lib and cout
122 2004-01-14 Benoit Regrain
123 * src/gdcmHeaderEntry.[h|cxx] : gdcmElValue -> gdcmHeaderEntry
124 * src/gdcmHeaderEntrySet.[h|cxx] : gdcmElValSet -> gdcmHeaderEntrySet
125 * src/*.[h|cxx] : make changes due to class name changes
126 * gdcmPython/demo/*.py : bug fix due to method names
128 2004-01-13 Benoit Regrain
129 * src/*.[h|cxx] : coding style
130 * vtk/*.[h|cxx] : coding style
132 2004-01-13 Benoit Regrain
133 * gdcmPython/testSuite.py : test the readable flag of file for tests
134 * src/gdcmDict.cxx, gdcmElValSet.cxx : bug fix under windows for prints.
135 It's lied to the stl compilation by MSVC (windows, always windows...)
136 * src/gdcmIdo.h, gdcmHeaderIdo.cxx : remove the Ido unused files
138 2004-01-12 Benoit Regrain
139 * src/*.h : add comments
140 * src/gdcmDictSet.h : set the method BuildDictPath in public
141 * src/gdcmTS.cxx, gdcmVR.cxx : use now a dictionnary file other than to be
142 directly setted in the source code
143 * Dicts/dicomTS.dic, dicomVR.dic : 2 new dictionnary files loaded by
146 2004-01-09 Benoit Regrain
147 * gdcmPython/gdcmVersion.py : add a gdcmVERSION variable information
148 * setup.py : use a reference to gdcmVERSION
150 2004-01-07 Benoit Regrain
151 * Modification to compile with the distutils.
154 2003-12-10 Benoit Regrain
155 * gdcmHeader is now aggregating gdcmFile, and not derived into. Thus, we
156 can use a gdcmHeaderHelper to load datas
157 * gdcmPython/testSuite.py : make the testSuite compliant with modifications
158 made in the source code
160 2003-12-10 Benoit Regrain
161 * Update Windows projects and .cvsignore files
163 2003-11-12 Jean-Pierre Roux
164 *ENH gdcmHeader constructor has one more parameter (default value : false)
165 that allows the user to 'go inside' the SeQuences only
167 gdcmElValSet:Print takes it into account
169 2003-11-12 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
170 *ENH: Update gdcmPython/CMakeLists
171 *FIX: (gdcmHeaderHelper) GetRescale and GetSlope
172 *FIX: (gdcmElValSet) char 'tag' was overiding private members (VC++)
174 2003-11-10 Jean-Pierre Roux
175 *FIX : gdcmHeader::LoadElements is now based
176 on the ListTag listElem member,
177 not longer on the TagElValueHT tagHt member
178 *ENH : PrintPubElVal shows (temporarily) both results,
179 with the tagHt member and the listElem member.
180 (it's easier to 'see' the problems when using Printheader)
182 *FIX : old private member LgrElem is now splitted into
183 ReadLength : Length actually found on disk (updated only
184 if bug fixing is necessary), for internal
186 UsableLength : Updated by FixFoundLength, to fix a bug
187 or to allow Parser going on.
188 Will allow to re-write a kosher header when a SeQuence
189 with a length (not 0000) is found
190 Warning : gdcmFile::Write still uses the TagHt (not ListElem)
191 because gdcmElValSet::Add does not update ListElem
194 2003-11-07 Jean-Pierre Roux
195 *FIX misstyping in Transfert Syntax name table
196 *ENH gdcmHeader::FixFoundLength now allow to 'go inside' tge SeQuences
197 when they have an actual length (not 0000 nor FFFFF)
198 (Nobody should care of it, but DICOMDIR explorers)
200 2003-11-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
201 *ENH: vtkgdcmViewer now works with LUT dicom (OT-PAL-face ...)
203 2003-11-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
204 *ENH: vtkGdcmReader now supports LUT !
205 (vtkgdcmViewer for now is not able to use them though)
207 2003-11-05 Jean-Pierre Roux
208 * in testSuite.py : new files names for checking the package
209 * Fix : Forgot to commit gdcmFile::GetImageDataSizeRaw();
210 that returns the pixel area size to the *aware* (vtk) user
211 that DOESN'T want to turn the PALETTE COLOR image into an RGB image
213 2003-11-05 Benoit Regrain
214 * in testSuite.py : Modify the rules for checking the paths
215 : Explicit error messages
216 * in __init__.py : Related modif
218 2003-11-03 Jean-Pierre Roux
219 * add gdcmHeaderHelper::GetNumberOfScalarComponentsRaw()
220 to be used by aware (vtk) users that want to manage
221 LUT (and no to turn the PALETTE image into an RGB pixels one)
222 * GetPixelType now returns 8U for 24 Bits images
223 (vtkGdcmReader compliant)
225 2003-10-31 Jean-Pierre Roux
226 * Removal of *all* gdcmData images and add them again
227 in order to loose the 'history' of un-anonymised images
229 2003-10-31 Jean-Pierre Roux
230 *RMV : removal of useless jBitsInJsample.h
231 for both 8 and 12 Bits JPEG Lossy Libraries
233 2003-10-31 Jean-Pierre Roux
234 * ENH : Add the functions gdcmFile::GetImageDataRaw
235 gdcmFile::GetImageDataIntoVectorRaw
236 that act as GetImageData and GetImageDataIntoVector
237 except the making of an RGB Plane from Gray Plane + LUT
238 Intended to aware (vtk) users who know how to manage
241 GetLUTRGBA return a R,G,B,A LUT if any
242 lgrTotaleRaw gives the 'Raw' length
243 GetImageDataRaw returns the gray Plane
244 * FIX : no more dirty trick for 'Segmented xxx Palette Color Lookup' images
245 (They stay Grey, just like with other Dicom viewers :-(
247 2003-10-30 Jean-Pierre Roux
248 * FIX : a VC++ intended syntax modif broke the 12/12 Bytes expanding
250 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
251 *ENH: Can be used like this '$vtkgdcmViewer *.dcm' with *.dcm
252 being coherents dicom files.
254 2003-10-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
255 *FIX: DOH ! Forgot about windo$e users, they couldn't read lossless jpeg,
257 *ENH: Turn it into DOS file type to match libgdcmijpeg8.dsp file type
258 *ENH: Two steps is necessary to please VC++ compiler...
259 *FIX: DOH ! libgdcmijpg8 -> libgdcmljpeg
260 *ENH: Add include dir to medcon lib
261 *FIX: only one function is being exported for now !
262 You should use GLOBAL(return type) see ljpg/jpeg.h for more info
264 2003-10-29 Jean-Pierre Roux
265 * adding gdcmHeader::GetLUTRGBA
266 returns a 4 * 256 Bytes Reg/Green/Blue/Alpha vtk compliant LUT
267 --> Mathieu, the modif u're waiting for is not yet committed
268 * removal of now useless GetLUTRed,GetLUTGreen,GetLUTBlue,GetLUTRGB
270 2003-10-27 Jean-Pierre Roux
271 * adding some xmedcon breaker files (courtesy of Loïc Boussel)
272 . 00191113.dcm DermaColorLossLess.dcm
273 MxTwinLossLess.dcm RadBWLossLess.dcm
274 * ENH: For version prior to vtkImageViewer2 -r 1.19
275 * FIX: avoid pb with xmedcon-breaker CT McTwin Elscint images
277 2003-10-27 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
278 * Removal of ido stuff in CMakeLists.txt
280 2003-10-24 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
281 * ENH: vtkGdcmReader.cxx can now read multiframe dicom
282 * FIX: remove a call to ->Modified ... see comments
283 * FIX: vtkgdcmViewer.cxx was writting ASCII file...this is so slooooooow !
285 2003-10-23 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
286 * FIX: Problem with path for libvtkgdcmPython
287 * ENH: Try adding a search script for python site-package
288 * RMV: Remove some file from medcon lib that are not necessary
289 * FIX: gdcm/Makefile.am fix for generating ljpg medcon
290 * ENH: CMakeLists.txt now generate 'pygdcm.so' instead of 'libpygdcm.so'
291 * FIX: More pragma disable fro VC++,
292 I don't think I break something as it is also disable in VTK/ITK.
293 But it fasten debug compilation time.
295 2003-10-23 Jean-Pierre Roux
296 * gdcm now deals with 16 Bits Run Length Encoded images
297 (they are compressed as 2 planes images,
298 one for the high Bytes, the other for low Bytes)
300 2003-10-22 Jean-Pierre Roux
301 * Now CheckRead takes into account :
302 the bugged 'Leonardo' Siemens images
303 the XA images, sent thru the burning VPRO station
304 * add I9000001.dcm, a GE dlx XA image, thru the VEPRO burning station
307 2003-10-22 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
308 * FIX: When copying a Makefile.am to CMakeLists.txt
309 one should remove the '\'
311 2003-10-22 Jean-Pierre Roux
312 * in gdcmData adding a bugged 'Leonardo' Siemens image
313 (wrong lengths in header)
314 OK with gdcm, KO with the other viewers :-)
315 * add a GE dlx XA image, thru the VEPRO burning station
318 2003-10-21 Jean-Pierre Roux
319 * in gdcmData add the checkvtkgdcmViewer.sh shell script
320 for a brutal checking of vtkgdcmViewer compliance
322 2003-10-21 Jean-Pierre Roux
323 * add the files for 'xmedcon' Jpeg Lossless library
324 * call of 'xmedcom' Jpeg Lossles libray (instead of the old LibIDO one)
326 2003-10-21 Jean-Pierre Roux
327 * 'Compacted Files' (12 Bits Allocate, 12 Bits Stored) are now dealt with
329 2003-10-21 Jean-Pierre Roux
330 * garbage Siemens 'Leonardo' images dealt with
331 (the patch is easy to remove)
332 * cosmetic changes to avoid warnings
334 2003-10-20 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
335 * ENH: vtkgdcmViewer now autoscale color/window level on start-up,
336 no need to press 'r' now.
338 2003-10-20 Jean-Pierre Roux
339 * upgrade of checkRead.sh checkWrite.sh according
340 to new Jpeg Lossless decompressor
341 * add US.3405.1.dcm, a genuine RGB medical file ...
342 * add gdcm-ACR-LibIDO.acr, unnormalized Rectangular LibIDO format image
343 * add CLIP0001-Sequoia-U11.dcm, US 'Clip', from SEQUOIA machine,
345 2003-10-15 Jean-Pierre Roux
346 * general anonymisation in gdcmData
347 * adding the 'color files' from
348 http://www.leadtools.com/SDK/Medical/DICOM/ltdc19.htm
349 * adding some well knowed bugged-header images
350 * adding checkRead.sk, checkReadColor.sh, checkWrite.sh,
351 waiting for their inclusion in Python testsuite
353 2003-10-15 Jean-Pierre Roux
354 * gdcmHeader::gdcmHeader(const char *InFilename, bool exception_on_error)
355 no longer seg faults when file is not found
357 2003-10-14 Jean-Pierre Roux
358 * Emprovement of reading for Dicom encapsulated Jpeg LossLess MultiFrame images
360 2003-10-14 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
361 * TODO: *.in file to genereate a UseGDCM later
363 2003-10-14 Jean-Pierre Roux
364 * Some supposed-to-be Dicom Images have no preamble.
365 OpenFile takes it into account
366 * Jpeg LossLess 24 Bits images doesn't break any longer gdcm
367 * Missing elements added in dicomV3.dic
368 (just to be affraid : have a look at
369 ftp://medical.nema.org/medical/dicom/2003/01v03dif/01v03_06.pdf
370 and do it again next year ;->
372 2003-10-13 Jean-Pierre Roux
373 * According to PS 3.3-2003 C.11.1.1.2 p 619, when each pixel of
374 a PALETTE COLOR is stored on 2 Bytes, theese 2 Bytes must be equal.
375 But there are NOT. It's fixed !
377 2003-10-13 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
378 * FIX: "jpeglib.h" was not found on VC++
379 * FIX: vtkgdcm was not being installed
381 2003-10-10 Jean-Pierre Roux
382 * ENH : OpenFile closes the file if it *really* doesn't look like
383 an ACR-NEMA / DICOM one.
384 * FIX : testWrite no longer writes an empty file if the source file
386 * ENH : One more JPEG LossLess type "JPEG Baseline (Process 14)"
389 2003-10-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
390 * FIX: CMake generate now documentation
391 * ENH: out of source doc build !
392 * ENH: Generate both user and dev documentation
393 * ENH: Should work on windows too
394 * ENH: Only one doxygen config.in file is needed
395 * FIX: make install should be ok now on ùnix plateform
396 * FIX: PATH to dictionary was wrong (missing /)
397 * ENH: OpenFile, return true if the file looks like an ACR or DICOM file
399 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
400 * vtkGdcmReader is now able to read rgb dicom file.
401 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
402 * added a gdcmViewer to vtk test, use mouse to control
403 window level & window width
405 2003-10-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
406 * CMake-ification of gdcm, we have now two build system
407 * FIX: on cygwin Wsock32 doesn't exist
408 * FIX: force jpeg dir to the local one (gdcm/src/jpeg)
410 2003-10-06 Emanuel Ollart
411 * FIX : compilation process wad broken.
412 Changed gdcmViewer_sources to vtkgdcmViewer_sources
414 2003-10-06 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
415 * change gdcmViewer -> vtkgdcmViewer
416 * change GetXSpacing and GetYSpacing "%f\\%" is parsed backward
418 2003-10-06 Jean-Pierre Roux
419 * FIX :A few nasty patches to allow the reading of a lot of nasty images
420 ( e.g : well known GE images with a wrong elem length,
421 : Philips MRI Images with a wrong Huffman table)
422 * still to be done : allow the reading of bugged LEONARDO Siemens images
424 2003-10-03 Jean-Pierre Roux
425 * Odd length strings are padded with '\0' (not with spaces,
426 to remain compliant with already defined strings,
427 like Transfert Syntax UID and others)
429 2003-10-03 Jean-Pierre Roux
430 * ENH :gdcmHeaderHelper::GetNumberOfScalarComponents() added,
431 to allow displaying RGB images (not only by affim ;-)
433 2003-10-03 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
434 * vtkGdcmReader is now able to read rgb dicom file.
435 * src/gdcmHeaderHelper : GetNumberOfScalarComponents()
437 2003-10-03 Jean-Pierre Roux
438 * A few nasty patches to allow the reading of a lot of nasty images
439 ( e.g : well known GE images with a wrong elem length,
440 : Philips MRI Images with a wrong Huffman table)
441 * still to be done : allow the reading of bugged LEONARDO Siemens images
443 2003-10-03 Jean-Pierre Roux
444 * One more JPEG LossLess type "JPEG Baseline (Process 14)" is now decoded.
446 2003-10-03 Jean-Pierre Roux
447 * gdcmHeaderHelper::GetNumberOfScalarComponents() added,
448 to allow displaying RGB images (not only by affim ;-)
450 2003-10-03 Jean-Pierre Roux
451 * gdcmFile::GetImageDataIntoVector now
452 - deals with MultiFrames MultiFragments Run Length Encoded files
453 - deals with YcBcR (YBR_FULL) files
454 - deals with YBR_YBR_FULL_422 files (they work as RBG files ?!?)
455 WARNING : nothing was checked for YBR_PARTIAL_422, YBR_ICT, YBR_RCT files.
458 2003-10-02 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
459 * src/*.cxx removed pragma thingies to src/gdcmCommon.h
460 Two reasons: - clear things
461 - third parties acces gdcm through header files, so won't
462 suffer anymore VC++ complains
463 2003-09-30 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
464 * add argv[1] in testvtkGdcmReader.cxx
467 2003-09-24 Jean-Pierre Roux
468 * The lines are now eigthy characters long.for
469 gdcmHeader.cxx gdcmHeaderHelper.cxx gdcmParse.cxx
471 2003-09-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
472 * src/gdcmUtil.[cxx|h] : change the _CreateCleanString return value from
473 char* to std::string. Thus, the use of strdup becomes useless. (see
474 previous commis of Malaterre)
475 * src/gdcmElValSet.cxx : reuse commented call to _CreateCleanString like
476 before the last Malaterre's commit.
478 2003-09-19 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
479 * This commit should fix the Debug building under VC++, the problem
480 was mainly a mixture of debug and release lib being loaded at startup.
481 * I also remove a depency to a specific C function: strdup. Because I had
482 to force the link to msvcrtd (whereas strdup is in libc).
484 2003-09-16 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
485 * "gdcm::Unfound" string changed to a constant variable (GDCM_UNFOUND)
486 located in the gdcmCommon.h file. All use of reference of tha has been
487 changed to now use the variable GDCM_UNFOUND.
489 2003-09-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
491 - gdcmPython/testSuite.py adapted to the JPR updated Dicts/dicomV3.dic
492 Dicom dictionary. The test suite can now be run again. Note:
493 I'm note very happy with the " (RET)" changes. I believe this
494 RETAINED comment should be dropped when parsing the dictionary.
497 - AUTHORS updated and now in alphabetical order
498 * Makefile.am now exports gdcm.dsw for Windoze users.
500 2003-09-11 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
501 * cygwin complains about missing std:: in subdir Test/
503 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
504 * remove some methods that are now in gdcmHeaderHelper
506 2003-09-10 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
507 * vtkGdcmReader set spacing and origin correctly
509 2003-09-09 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
510 * Fix a few delete/delete[] mismatch
512 2003-09-08 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
513 * src/gdcmHeaderHelper.[h cxx]: added new class that provide an
514 interpretation to data given by gdcmHeader. For instance there are
515 heuristics to get informations (look at different places).
516 * it also include a specific class: gdcmSerieHeaderHelper devoted to
517 sorting DICOM images based on different strategies.
518 * modified Makefiles accordingly.
520 2003-09-05 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
521 * src/*.cxx : added pragma disable 4786/4251 to get rid of ~4300 warning
522 when building in debug mode
523 * vtk/win32/vtkgdcm.dsp : change /MT -> /MD and /MTd -> /MDd to match
524 src/win32/gdcmdll.dsp
525 * vtk/win32/vtkgdcm.dsp : added /nodefaultlib "mscvrt" for debug mode
527 2003-08-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
528 * Corrected a leak in vtkGdcmREader.cxx, the pSource was find thanks to valgrind.
530 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
531 * src/win32/libgdcmjpeg12.dsp was not dos format
532 * src/win32/libgdcmjpeg12.dsp : libgdcmijpeg12_EXPORTS -> LIBGDCMIJPEG12_EXPORTS
533 * src/win32/gdcmdll.dsp: + /I "..\jpeg\libijg12"
535 2003-07-29 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
536 * src/gdcmHeader.h : add std:: prefix for stl elements... like others in
538 * src/gdcmFile.cxx : bug fix in affectation type
539 * src/jpeg/libijpeg12/jmorecfg12.h : export for windows modified... like
540 in src/jpeg/libijpeg8/jmorecfg8.h (JPR : copy/paste exists !!!)
541 * Modifs of MVSC projects to compile them. Not concerning 2 identic
542 symbols... future problem ?
544 2003-07-29 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
545 * src/win32/libgdcmijpeg12.dsp was missing
546 * modified gdcm.dsw accordingly
548 2003-07-28 Mathieu Malaterre <Mathieu.Malaterre@creatis.insa-lyon.fr>
549 * src/gdcmHeader.cxx : misplaced return 0.; for ACR/NEMA
551 2003-07-24 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
552 * src/jpeg/libijg12/.cvsignore, jconfig.* : ommited files while last
553 commit of JPR (before his hollidays to facilitate our work).
554 * setup.py : bug fix in code. Modifications made while the last commit
555 of JPR. The code hasn't been tested before the commit... it's so
556 useless to make that (for best programmer that is JPR) !!!
558 2003-07-08 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
559 * tagged the current version as Version0_3 (i.e. version 0.3)
561 2003-07-08 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
562 * vtk/testvtkGdcmReader.cxx : remove a symbol that is unused
563 * src/jpeg/libijg8/jmorecfg.h : adding export symbol for windows
564 * *.dsp : modifications to use new libgdcmijpeg8 library
565 * setup.py : bug fix on VTKPATH variable
566 * PACKAGER : adding all concerning windows
568 2003-07-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
569 * src/gdcmElValSet.cxx, gdcmFile.cxx: JPR bug fix, removal of
571 * TODO, vtk/vtkGdcmReader.cxx: upcoming fixes comments.
572 * gdcmPython/testSuite.py: JPR bug fix, brutal erasement of
573 test suite reported error.
574 * PACKAGER file added (describes what a packager must do when
575 packaging a new release).
576 * MANIFEST.in, now declares jconfig.linux and jconfig.vc
577 * configure.in: upgraded version number to 0.3.0
578 * fixing build of rpm (through rpm -ta):
579 - Doc/Makefile.am exports proper doxygen files
580 - src/jpeg/libijg8/Makefile.am exports the include files.
582 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
583 * vtk/vtkGdcmReader.cxx : bug fix when loading only 1 file.
584 * src/gdcmHeader.h : formatting code
586 2003-07-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
587 * vtk/vtkGdcmReader.[cxx|h] : bug fix when loading only one file.
588 We were obtaining error message from vtk. Now, creation of file list
589 is made in an internal list to prevent this problem.
590 Bug fix when output is empty.
591 Bug fix in update of progress value. Previous commit for this was a bad
593 * vtk/vtkGdcmReader.h : adding comments for InternalFileNaleList variable
595 2003-07-04 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
596 * src/gdcmHeader.h : added method to get the file name
597 * vtk/vtkGdcmReader.[cxx|h] : bug fix concerning loading of bad dicom
598 files. Added method to remove all files on the input
599 Added FIXME comment concerning the bad parsing of header made by
600 ExecuteInformation method (in ExecuteData method)
602 2003-07-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
603 * vtk/Makefile.am: vtkGdcmReader.h should now be cleany installed
604 when using make instal.
605 * src/gdcmFile.cxx : bug fix under Window after JPR commit
606 RQ : the JPR doesn't appear in the ChangeLog... normal for him
608 2003-07-03 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
609 * setup.py : adding include dir of jpeg lib to compile all sources
610 * */Win32/*.dsp : JPR fix for windows compilation
612 2003-07-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
613 * src/jpeg/libijg8/jconfig.* : JPR bug fix : now compile on both
615 * src/gdcmJpeg.cxx : JPR bug fix : erroneous include
616 * src/win32/gdcmdll.dsp : JPR fix for windows compilation
618 2003-07-02 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
619 * setup.py is again effective on un*x (takes into account the
620 addon of the jpeg library)
621 * Doc/DoxyDevelInstal.txt added (developper's raw documentation)
622 * Doc/Doxy* updated (includes above enhancements)
623 * INSTALL now points to web documentation
625 2003-07-01 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
626 * src/gdcmHeader.h doesn't make unnecessary reference to
628 * gdcmPython/Makefile.am now avoids calling the wrappers for the
630 * src/gdcm*.[cxx|h] :
631 - to allow compilation with gcc 3.x
632 -- clean up of STL usage (added explicit usage of std::)
633 -- small fixes on exceptions.
634 Note: linking not tested !
635 - clean of doxygen comments to avoid warnings at documentation
637 * vtk/vtkGdcmReader.cxx: g++ warning message clean up (platform
638 dependent convertion).
640 2003-06-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
641 * Clean up of previous JPR garbage commit (not even commented in the
643 - Test/Makefile.am removed the reference to unexisting testTS.cxx
644 - moved all jpeg related files from src to src/jpeg/libijg8, with
645 addition/modification of Makefile.am and configure.in.
646 - the testSuite is still brain damage (not guilty).
648 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
649 * WrapVTK.py : modifications to get correctly vtk source files to
651 * vtk/vtkGdcmReader.cxx : modification for an already existing name
652 (FileName -> Filename)
654 2003-06-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
655 * vtk/vtkGdcmReader.[cxx/h]:
656 - UpdateProgress method should now be effective
657 - removed the limitation on having only images loaded (as opposed
659 - when building a stack of images/volume, a lesser number of
660 gdcmHeader and gdcmFile instances should be used (hopefully
661 accelerating things).
662 - when building a stack of images/volumes, files which are not
663 loadable (wrong path-filename, wrong permissions on existing file,
664 or file not parsable by gdcm) are replaced with a black image
665 in the stack (for the caller to notice the problem).
667 2003-06-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
668 * vtk/vtkGdcmReader.cxx: hopefully corrected Z extent.
670 2003-06-02 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
671 * vtk/vtkGdcmReader[cxx|h] : makes correct code to remove conflicts
672 between standard library (std) and vtk library (problems are found
673 under Windows... thanks Windows !)
675 2003-05-30 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
676 * vtk/vtkGdcmReader[cxx|h] should now be volume aware (read ready for
678 * gdcmPython/demo/vtkGdcmReader.py: commented lines for volume test
680 2003-05-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
681 * vtk/vtkGdcmReader[cxx|h] preparation addons for loading volumes.
683 2003-05-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
684 * When compiling with distutils (see setup.py) the C++ compiler is
685 called with different flags than the default ones (with automake).
686 In order to fix all those warning, I compiled gdcm with the command
687 make 'CXXFLAGS=-Wall -Wstrict-prototypes -D__STDC_LIMIT_MACROS'
688 and went for warning fixes:
689 - src/gdcmHeader.cxx, Test/dcm2acr.cxx, pourFindTaggs.cxx cleaned
690 up from unused variables.
691 - vtk/vtkGdcmReader.cxx: potential bug fix.
692 * src/gdcmHeader.h: Doxygen warning cleanup
694 2003-05-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
696 - typemaps correction to take into account the systematic replacement
697 of "using namespace std" with std:: prefix e.g. std::list,
698 std::string... (cf changes of 2003-05-21).
699 - gdcmGlob global variable of type gdcmGlobal (defined in
700 src/gdcmUtil.cxx and declared in gdcmPython/gdcm.i) is now
701 exported to Python a as cvar.
702 * gdcmPython/__init__.py now defines two functions GetPubDictTagNames()
703 and GetPubDictTagNamesByCategory() as a replacement for deprecated
704 gdcmDictSet.GetPubDictTagNames() and
705 gdcmDictSet.GetPubDictTagNamesByCategory() class functions (i.e.
707 * gdcmPython/demo/printGroupedPublicDict.py is operational again,
708 with the above changes.
710 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
711 * setup.py, manifest.in : bug fix under linux
713 2003-05-22 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
714 * Modification of setup.py to compile vtk part too. Then, we have 2
715 wrappers which must work with same distutils. For that, we have a
716 generic distutils in distusiltsWrapping.py ; with :
717 - build_extWrap class to wrap generically all extensions,
718 - ExtensionWrap base class for all wrapping extension that contains
720 - Wrapper interface which wrap sources
721 + In WrapSwig.py we have extension and wrapper for Swig
722 + In WrapVTK.py we have extension and wrapper for VTK
723 * MANIFEST.in : modifications to consider vtk directory and new python
724 files for compilation
726 2003-05-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with Benoit Regrain
727 * Added python wrappers of vtkGdcmReader vtk class (see the
728 source in vtk/vtkGdcmReader.cxx) :
729 - vtk/Makefile.am now builds a library
730 - gdcmPython/Makefile.am now builds vtkgdcmPython a second import
731 python library (as opposed to _gdcm.so wich are the python
732 wrappers of gdcm). vtkgdcmPython.so uses the vtk python wrappers
733 (vtkWrapPython and vtkWrapPythonInit utility) to build vtkgdcmPython
735 - configure.in has an additional flag --enable-vtk that needs
736 to be set to enable compilation of vtk related code, that is:
737 + vtk/vtkGdcmReader.so and
738 + vtk/testvtkGdcmReader C++ demo of vtk wrappers of gdcm)
739 + gdcmPython/vtkgdcmPython.so (see above)
740 - gdcmPython/demo/vtkGdcmDemo.py corrected (some images cannot
741 be read when compressed or when HighBit + 1 != BitsStored),
742 - gdcmPython/demo/vtkGdcmReader.py added. This demo illustrates
743 the usage of the python wrapper of vtkGdcmReader vtk class.
744 * vtk/vtkGdcmReader.cxx: bug fixed (thanks to Benoit Regrain).
745 * src/*.[h] all occurences of stl classes are now prefixed with
746 std::, and all occurences of "using namespace std;" where removed.
747 This is to avoid pollution of global namespace in included files.
748 Apparently vtk does not avoid this pitfall: when using both
749 gdcm and vtk (as in vtk/vtkGdcmReader.cxx) this ended up in a
750 collision of various stl members (principally cout...).
751 * gdcmPython/testSuite.py now cleanly removes temprory generated
753 * gdcmPython/gdcm.i now declares a typemap for std::string (to
754 comply with above changes)
756 2003-05-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
757 * src/gdcmHeader>[h/cxx] added gdcmHeader::GetPixelSize()
758 * vtk/vtkGdcmReader.cxx now properly inports the image in the
759 vtk data structure (an image Flip was required).
760 * vtk/testvtkGdcmReader.cxx refers to gdcmData subdir instead of Data.
761 * cosmetic changes in documentation.
763 2003-05-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
764 * src/gdcmHeader.cxx: the constructor no longer exits when an
765 unexisting file is given as argument.
766 * The subdirectory Data (containing all the images used for the
767 test suite) is not part of this repository anymore. A new module
768 containing those images is now available at
769 :pserver:xxx@cvs.creatis.insa-lyon.fr:2402/cvs/public
770 with the name gdcmData.
771 All the python scripts (including the package initialisation file
772 gdcmPython/__init__.py) were adapated to take this change into
773 account (basically GDCM_DATA_PATH is now GDCM_TEST_DATA_PATH).
775 2003-05-5 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
776 * vtk subdir added. Contains vtkGdcmReader.[cxx|h] a vtk class
777 inherinting from vtkImageReader and testvtkGdcmReader.cxx a small
778 demo of the usage of this class.
779 Compilation of this vtk part is only done when using the --enable-vtk
780 at configure (or autogen.sh) stage.
782 2003-04-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
783 * More memory link related corrections and documentation fixes.
785 - maximum info is obtained with a command of the form:
786 valgrind --leak-check=yes --leak-resolution=high --num-callers=40
787 --show-reachable=yes PrintHeader
788 - the remaining reachable blocks seem to come from the STL
789 allocation scheme through the usage of map and list. It looks
790 like this memory cannot be freed but it is not a memory leak
791 (in fact further invocation to the STL would recollect the
792 unused memory allthough it cannot explicitely be freed).
793 * gdcmPython/demo/vtkGdcmDemo.py added: this is a small demo
794 of displaying an image parsed with gdcm and displayed with VTK.
795 Note: some images don't seem to work e.g.
796 python vtkGdcmDemo.py ../../Data/US-RGB-8-esopecho.dcm
797 * src/gdcmHeader.x: dicom_vr and Dicts are not class members anymore.
798 Allthough this weakens the semantics, it is a ditch attempt to
799 make gdcm more thread friendly.
801 2003-04-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
802 * Memory link hunt (by using valgrind through the command
803 valgrind --show-reachable=yes --leak-check=yes PrintHeader).
804 - added src/gdcmVR.cxx gdcmVR.h that objectify the previous
805 gdcmHeader::_dicom_vr.
806 - gdcmHeader::InitVRDict transfered as gdcmVR::gdcmVR().
807 - gdcmHeader::dicom_vr is now of type gdcmVR* as opposed to
809 - gdcmGlobal global object contained class added (see src/gdcmUtil.x)
811 2003-04-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
812 * src/Makefile.am now exports all the necessary include files at
816 * UpdateGroupLength replaced by new one
819 * UpdateGroupLength re-written using H-Table
820 (named UpdateGroupLengthNew untill checks are over)
822 2003-04-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr> with JPR
823 * Data/im_00001 renamed to gdcm-MR-PHILIPS-16-Multi-Seq.dcm
824 * gdcmPython/testSuite.py now include a test of gdcmFile::Write.
826 - gdcmHeader::GetPubElValSet removed.
827 - gdcmElValSet::WriteDcm, WriteAcr, WriteExplVR, revamped to
828 UpdateGroupLength, WriteElements, Write.
829 - gdcmHeader::FileType moved to gdcmCommon.h. The enum FileType
830 doesn't contain TrueDicom anymore since ExplicitVR and ImplicitVR
831 carried the same semantics.
832 - src/gdcmHeaderIdo.cxx changed accordingly.
833 - gdcmFile::WriteBase now regroups all the codes from previous
834 versions of WriteDcm, WriteDcmImplVR, and WriteACR.
835 - enum FileType moved to gdcmCommon.h
836 * src/gdcmHeader.cxx AddDefault trashed
838 * getimageDataSize now calls gdcmGetXSize
839 * Test/*.cxx changed to agree with above changes
841 2003-03-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
842 * src/gdcmHeader.h: LoadElements() is not a public method anymore
843 (to avoid double call by end user).
844 * Test/*.cxx LoadElements() doesn't need to be called explicitely
845 by end user, since gdcmHeader::gdcmHeader now handles it.
847 2003-03-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
848 * gdcm/Doc many doxygen changes:
849 - Doxyfile now has two different versions, DoxyfileUsers that generates
850 the html.users end users oriented documentation and
851 DoxyfileDeveloppers that generates the html.developper developper
852 oriented documentation.
853 - README changed accordingly
854 - requirement.txt removed (old design info moved to TODO).
855 - Additional files DoxyInstallation.txt, DoxyIntroduction.txt,
856 DoxyMainPage.txt, DoxyPython.txt provide more information.
857 - Note: the website http://www.creatis.insa-lyon.fr/Public/Gdcm/ can now
858 be updated by simply regenerating the docs with doxygen and copying
859 html.developper and html.users to tux:/home/httpd/html/Public/Gdcm
860 * src/gdcmElValSet.cxx: stl <map>.count() can only return 0 or 1. Hence
861 all the tests in the form "if (<map>.count() >1)" were removed.
862 * src/gdcmFile.cxx: cosmetic changes to avoid messages of doxygen about
863 ill-formed documentation sections.
864 * src/gdcmHeader.cxx: ditto
866 2003-03-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
867 * setup.py fixed for un*x (needed macro for stdint.h)
868 * Test/test.cxx renamed to PrintHeader.cxx to avoid collision on
869 un*ces with sh-utils test utility.
870 * gdcmPython/demo/test.py renamed to PrintHeader.py
871 * gdcmPython/demo/ReorganiseFiles.py new demo script added.
872 * gdcmPython/win32/gdcmpycomplet.dsp renamed to gdcmpyembedded.dsp.
873 * gdcmPython/win32/gdcmpy.dsp trashed away (brain damaged).
874 * src/gdcm*.cxx JPR's bad inclusion fixed.
876 2003-03-26 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
877 * src/gdcmHeader[h, cxx] gdcmHeader now has an IsReadable predicate.
878 * gdcmPython/demo/test.py changed accordingly.
880 2003-03-25 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
881 * gdcmPython/Makefile.am fixed linking against libstdc++
882 * gdcmPython/_gdcm.so symbolic link to gdcmPython/.libs/pygdcm.so added.
883 * Swig subdir (historical tests of swig version 1.3.17++) removed
884 * Test/testChangeEntete.cxx some lines commented out in order to make
886 * src/gdcmHeader.cxx cleaned up wild JPR's dirty kludge.
887 * src/gdcmElValSet.cxx cleaned up frog's forgotten debug message
889 2003-03-24 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
890 * src/gdcmHeader.cxx gdcmHeader::gdcmHeader now calls LoadElements(),
891 hence the user doesn't need this explicit call.
892 - gdcmPython/testSuite.py, gdcmPython/demo/*.py changed accordingly
893 i.e. LoadElements() call removed.
894 * src/gdcmCommon.h now defines UINT32_MAX (see stdint.h).
895 - src/Makefile.am declares the proper flag for g++.
896 * src/gdcmElValSet.h added gdcmElValSet::GenerateFreeTagKeyInGroup
897 for adding user defined new tags.
898 - src/gdcmHeader.cxx gdcmHeader::NewManualElValToPubDict added.
899 - src/gdcmHeader.cxx gdcmHeader::AddAndDefaultElements now
900 cleanly adds some gdcm added tags (like gdcmXSize, gdcmYSize...)
902 2003-03-17 Fabrice Bellet <Fabrice.Bellet@creatis.insa-lyon.fr>
903 * Makefile.am, acinclude.m4, configure.in, python.m4, Dicts/Makefile.am,
904 Doc/Makefile.am, Test/Makefile.am, gdcmPython/Makefile.am,
905 src/Makefile.am : the project should properly compile and install
906 with the autotools, included the python wrappers part.
907 * gdcm.spec.in : added a spec file for RPM packaging.
909 2003-03-14 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
910 * src/gdcmUtils.cxx : redifinition of defaults parameters in code
912 2003-03-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
913 * gdcmPython/__init__.py fix of GDCM_DICT_PATH which was not
914 to exported to the environement (see gdcmPython/testSuite.py
916 * src/gdcmElValSet.[cxx/h], gdcmElValue.[cxx/h], gdcmFile.[cxx/h],
917 gdcmHeader.[cxx/h]: ElValSet class renamed to gdcmElValSet, and
918 ElValue class renamed to gdcmElValue for obvious consistency reasons.
919 * src/gdcmElValSet.cxx, src/gdcmUtil.[cxx-h] Tokenize utility function
920 moved away from gdcmElValSet.cxx to gdcmUtil.cxx.
922 2003-03-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
923 * gdcmPython/__init__.py doesn't crash anymore when running in
924 in InstallMode or PreInstallMode but with an environement given
925 value of GDCM_DICT_PATH.
926 * src/gdcmDictSet.[cxx/h] coding style.
928 2003-03-06 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
929 * src/gdcmHeader.h and gdcmHeader.cxx Coding style + doxigenation.
930 * src/gdcm.h general comments moved to TODO, and README
931 * src/gdcm.h should now be seen as a user commodity (including it
932 should suffice to fully use gdcm). It is nowhere including within
933 any of the kernel files src/*.cxx and src/*.h.
935 2003-03-05 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
936 * src/gdcm.h splitted in gdcmCommon.h, gdcmDict.h, gdcmDictEntry.h,
937 gdcmDictSet.h, gdcmElValSet.h, gdcmElValue.h, gdcmFile.h,
939 * src/gdcm*.cxx only include their corresponding include file
940 (as opposed to gdcm.h)
941 * gdcmPython/gdcm.i changed accordingly
942 * Test/Makefile.am corrected and added NEWS, AUTHORS in order for
943 the autogen.sh generated "make snapshot" command to work.
944 * autogen.sh removed history related references to crea package.
946 2003-03-04 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
947 * distutilsSwigCPlusPlus.py work around some swig portability
950 2003-03-03 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
951 * Eventually, python/gdcmPython was renamed to gdcmPython. This
952 was done in a last ditch attempt to get setup.py _really_
953 operationnal. The python/gdcmPython layaout add the advantage
954 of hidding away the python related distutils specific files
955 (MANIFEST.in, setup.py, distutils*.py...) from the main directory.
956 Alas, the src directory was out of scope (i.e. it's relative
957 position to setup.py was ../src) which made things impossible to
958 handle (see previous version of python/setup.py). Crossing fingers...
960 2003-02-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
961 * python/setup.py now works on Un*x. (harder than I thougth)
962 * python/distutilsSwigCPlusPlus.py can now have include files
963 among the list of sources.
965 2003-02-20 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
966 * src/gdcmHeader.cxx : bug fix - opening dicom file in binary !!!
967 * modifications in MSVC projects
969 2003-02-19 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
970 * As stated by the first lines of Test/ExceptionAndPython/README, it
971 looks like we can move back to original usage of exception within
972 src/gdcm* and hence remove the errno stuff that was introduced
973 as a quick and dirty fixture of this problem (added to the TODO).
974 * Doc/Doxyfile configuration file for Doxygen and corresponding
975 README file for usage added.
976 * Test/testWrite.cxx added. This new test comes from a split of
977 test.cxx that is now reverted to its original purpous i.e.
978 testing the proper parsing of a Dicom related file.
979 testWrite.cxx concentrates on testing the IO part of gdcm.
980 * Test/bug1.cxx (containing a bug on WIn32) added.
981 * src/gdcm.h, gdcmHeader.cxx, gdcmDictSet.cxx:
982 - gdcmHeader::GetPubTagNames and gdcmHeader::GetPubTagNamesByCategory
983 whose purpose is to publish the content of the TagNames of the
984 Dicom public dictionnary were not accessible without an
985 instance of class gdcmHeader.
986 - those methods are now static methods of gdcmDictSet and hence
987 require no instances at all to be invocated.
988 - within gdcmDictSet this change required to change some method
989 to class methods (i.e. are now static) among which SetDictPath
990 (renamed to BuildDictPath) and LoadDefaultPubDict.
991 * python/gdcmPython/demo/printGroupedPublicDict.py changed to illustrate
992 the above changes by calling the new method classes of gdcmDictSet.
993 * python/gdcmPython/__init__.py now exposes gdcm.gdcmDictSet for
994 the above to be effective.
995 * python/gdcmPython: in order to wrap properly the above changes
996 for Python, swig version now needs to be > 1.3.17.
997 * python/gdcmPython/Makefile fixed to adapt itself to new
998 configure/make shema introduced by Johan Montagnat (thanks for the
999 contribution). Alas this Makefile cannot be turned into a proper
1000 Makefile.am without some heavy changes in the configure.in
1001 (for python dectection).
1002 * python/gdcmPython/gdcm.i: the out typemap map<string, list<string>>*
1003 now avoids publishing the empty entries.
1005 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1006 * python/setup.py : bug fix concerning install under windows
1007 ExtraPath reused :-P
1008 * gdcm.dsw : bug fix concerning path for libraries for python !!!
1010 2003-02-13 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
1011 * Dicts/dicomV3.dic : remove double spaces !!!
1012 * src/gdcmElValSet.cxx : bug fix concerning windows compiler
1013 * python/gdcmPython/win32/gdcmpycomplet.dsp : bug fix concerning paths
1016 2003-01-28 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1017 * src/gdcmHeader.cxx added a post header parsing AddAndDefaultElements
1018 method. Doxygenation.
1019 * src/gdcm.h clean up of JPR spurious comments.
1021 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1022 * python/distutilsSwigCPlusPlus.py now properly collects the
1023 shadow classes generated by "swig -c++" (gdcm.py in our case)
1024 when using "python setup.py install".
1025 * python/gdcmPython/__init__.py imports gdcm.py and only manually
1026 reexports the working classes.
1027 * src/gdcmHeader.cxx all the try/catch/throw calls were replaced
1028 by the classical C errno scheme. This is to prevent an obscure
1029 behavior of the python wrappers when importing wxPython.wx prior
1030 to gdcmPython (which ended up in an abort call). An illustration
1031 of this oddity can be found in the Test/ExceptionAndPython
1032 subdir (see the README file). This problem probably due to
1033 an combination of g++ and dynamic loading.
1034 * added Test/ExceptionAndPython (see above)
1036 2003-01-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1037 * Changed the layout of the python part to avoid bloating main
1038 directory with setup.py, distutilsSwigCPlusPlus.py, MANIFEST.in
1039 i.e. the distutils arsenal. All the python related stuff is
1040 again in a python subdir, but the package itself is now in
1042 * setup.py was cleaned up:
1043 - pythonIncludePath removed
1044 - python setup.py bdist target is now functional.
1045 * gdcmPython/__init__.py doesn't export FileName any more (to avoid
1046 collision with other packages). gdcmPython/demo/*.py changed
1049 2003-01-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1050 * python subdir moved to gdcmPython (preparation of distutils packaging).
1051 * gdcmPython/setup.py and distutilsSwigCPlusPlus.py added. The
1052 distutils installer is operational.
1053 * - gdcmPython/__init__.py now properly loads the swig generated
1054 shadow classes (from gdcm.py).
1055 - gdcmPython/demo/*.py changed to import the package gdcmPython
1056 instead of gdcmPython/demo/load.py.
1057 - gdcmPython/testSuite.py changed to import the package gdcmPython.
1059 2002-12-16 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1060 * src/gdcm.h, src/gdcmHeader.cxx: added GetPubTagNames() resp.
1061 GetPubTagNamesByCategory() to gdcmHeader that return a list of the
1062 entries within the associated public Dicom dictionary resp. the same
1063 information but sorted by the fourth field (PAT, IMG, DIR) of the
1065 - Dicts/dicomV3.dic Entries which had and unspecified fourth field
1066 are now in the "???" group.
1067 - python/gdcm.i changed accordingly,
1068 - python/demo/printGroupedPublicDict.py added, that gives an example
1069 of the above new functionalities in Python.
1071 2002-12-11 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1072 * src/gdcm.h, gdcmHeader.cxx:
1073 - historic references to glib's g_malloc and g_free (#defined)
1074 were definitively removed.
1075 - gdcm.h: cosmetic changes (part of comments moved to Doc/requirements)
1076 * src/gdcmElValSet.cxx:
1077 - GetElement(guint32, guint32) renamed to GetElementByNumber.
1078 - GetElValue(guint32, guint32) renamed to GetElValueByNumber.
1079 - GetElValue(string) renamed to GetElValueByName.
1080 - Added GetElementByName(string).
1081 * src/gdcmHeader.cxx: added
1082 - GetPubElValRepByNumber(guint16, guint16)
1083 - GetPubElValRepByName(string)
1084 - GetShaElValRepByNumber(guint16, guint16)
1085 - GetShaElValRepByName(string)
1086 - GetShaElValByNumber(guint16, guint16)
1087 - GetShaElValRepByName(string)
1088 - GetElValRepByNumber(guint16, guint16)
1089 - GetElValRepByName(string)
1090 - GetElValByNumber(guint16, guint16)
1091 - GetElValRepByName(string)
1092 * Doc/requirements.txt added.
1094 2002-12-9 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1095 * Test/Makefile building now depends on the one of libgdcm.so
1096 * src/gdcmHeader.cxx and gdcm.h are now OB (undefined length encoded
1097 pixel data) aware which enables finding the address (offset) of
1098 the pixel data of JPEG encoded DICOM files. This leaves only a single
1099 file in the testSuite whose pixel data address (offset) is unknown.
1100 * python/testSuite.py changed accordingly.
1102 2002-12-6 Christophe Odet + Hugues Benoit-Cattin + Eric.Boix
1103 * VC++ has some strong limitations when working with the STL, as stated
1104 in http://support.microsoft.com/support/kb/articles/Q168/9/58.ASP :
1105 "Also note that some STL containers (map, set, queue, list, deque)
1106 cannot be exported. [...]
1107 Some STL classes contain nested classes. These classes can not
1109 This is caused by a designed limitation that once a template
1110 class is instantiated, it can not be re-instantiated and
1112 Since our usage of map<> is ubiquitous in gdcm, this "designed
1113 limitation" of VC++ is a pitfall.
1114 Hence the Python wrappers of gdcm cannot be incrementally linked
1115 against the c++ dynamic library. The dirty but only workaround is
1116 to forget about incremental link of dynamic libraries and to generate
1117 the Python wrappers library with the inclusions of the underlying C++
1119 The following modifications concern this matter on Win32/VC++:
1120 - wrapping python correct with standalone wrapped dll (don't use separate
1121 dll under windows !!!!)
1122 - python21_d debug mode enabled (ask Frog how to use it :-)
1123 - NO problem with having an STL member of class for example string in C++
1124 WITH THE RESTRICTION OF FORGETING ABOUT INCREMENTAL LINK.
1125 - Python test of dcmlib in Python is ok under windows on a large set
1127 * removed glib references
1128 * typedef's inserted in gdcm.i for correct swig type management
1130 2002-11-27 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1131 * python/demo/*.py load.py extracted from test.py. Added explore.py
1132 that only displays required tags and testAll.py that parses all
1133 the files of the testsuite without using unittest.
1134 * python/testSuite.py other additional test on new files added.
1135 * Data/* new test files added accordingly to the testSuite.
1136 * src/gdcmHeader.cxx avoid overwriting of the dictionary when
1137 the vr in the file differs from the one of the dictionary.
1139 2002-11-20 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1140 * src/gdcm.h and gdcmHeader.cxx gdcm no longer loads all the elements
1141 values, but limits itself to values which are below a user specified
1142 size (by default 1024 bytes).
1143 * python/gdcm.i : elements not loaded (because their size is above the
1144 user specified treshold) are exported with their TagKey as key of the
1145 python dictionary. This enables the testsuite to make some checks
1146 on the unloaded elements (since we have their offset and size).
1147 * python/testSuite.py
1148 - now tests for the existence and proper value of the pixel data
1149 - two new examples added.
1150 * Data/gdcm-MR-SIEMENS-16.acr[12] added.
1152 2002-11-18 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1153 * src/gdcm.h and gdcmHeader.cxx are now "Big Endian transfer syntax"
1154 aware. See the strategy comments in gdcmHeader::FindeLength().
1155 * Test/test.cxx now accepts a filename as first argument.
1156 * Data/US-PAL-8-10x-echo.dcm and US-RGB-8-epicard.dcm added.
1157 * python/testSuite.py changed to integrate test on above files.
1159 2002-11-15 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1160 * Dicts/dicomV3.dic removed all the trailing (RET) when the
1161 the vr was also RET.
1162 * python/testSuite.py more tests added.
1164 2002-11-14 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1165 * python/testSuite.py unittest test suite added (uses Data)
1166 * Data/* dcm and acr files for the test suite.
1167 * glib dependance removed from un*x version. We now use ISO C99
1168 7.18 Integer types (see stdint.h)
1169 - python/Makefile, src/Makefile src/gdcm.h
1170 * src/ when an explicit vr (like dicom files) suddenly poped an
1171 implicit element we use to mark the underlying DictEntry of the
1172 concerned ElValue with "Implicit". This strategy was damageable
1173 too the public or provite dictionaries, since some of their vr
1174 would be changed. Since Header::FindLength heavily relies on the
1175 detection by Header::FindVR of falsely explicit elements, I
1176 added an extra ImplicitVr member to ElValue (boolean).
1177 The rest of the changes we the necessary adaptations.
1179 2002-11-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1180 * src/gdcmHeader::FindLength bug fix when trapping falsely explicit
1182 * src/gdcmHeader::FindVR: hard way fix of falsely explicit vr files.
1184 2002-11-8 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1185 * Adaptation for porting to VC++:
1187 o forced to use std namespace (for string to be known)
1188 o all class use __declspec export style on WIN32
1189 - src/gdcmUtil.cxx new Exit method that wraps the exit call
1190 (in stdlib.h on Win32 but in std:: for gcc)
1191 * src/gdcmDictSet::SetDictPath adds a trailing / to environement
1192 variable GDCM_DICT_PATH.
1193 * src/gdcmHeader.cxx verbose comments made discrete.
1195 2002-11-7 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1196 * python/gdcm.i: added a typemap that converts a C++ hashing table
1197 to native Python dictionary.
1198 * python/demo/test.py:
1199 - now uses the native dictionary for exploration of gdcmHeader.
1200 - takes an optional filename argument (the file to parse).
1201 * src/gdcm.h and gdcmHeader.cxx: gdcmHeader now has an accessor on
1202 PubElVals hashing table.
1203 * Dicts/dicomV3.dic removed error prone trailing spaces.
1205 2002-11-6 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1206 * Python wrapping process moved away from src/Makefile to
1207 newly created python/Makefile (as well as gdcm.i)
1208 * python/demo/test.py (that mirrors Test/test.cxx) is effective.
1209 * src/gdcmHeader::FindLength only looks for current vr when necessary.
1210 * src/gdcmDictSet.cxx: the dictionnaries directory path is now imported
1211 from the environement variable GDCM_DICT_PATH (when existing).
1212 * src/gdcmDict::GetTag bug fix.
1214 2002-10-31 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1215 * Straightforward temporary fixes for swig to build the python wrappers.
1216 src/Makefile now has a python working entry [by working we mean
1217 that we can import de shadow classes without errors].
1219 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1220 * hashtest.cxx removed (since allready in Test)
1221 * src/gdcmlib.h renamed to src/gdcm.h
1222 * src/dcm.i renamed to src/gdcm.i
1223 * src/Makefile prepared for python wrapping
1225 2002-10-29 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1226 * src/gdcmHeader.cxx :
1227 - Parsing of header is now separated from loading of element values
1228 (see gdcmHeader::LoadElements).
1229 - general clean up of hopefully all file access (creation of
1230 ReadInt16 and ReadInt32)
1232 2002-10-22 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1233 * src/gdcmHeader.cxx :
1234 - RecupLgr renamed to FindLength and cut off with new IsAnInteger
1236 - SetLgrElem renamed to SetLength
1237 - GetLgrElem renamed to GetLength
1238 - ~gdcmHeader() made virtual to pesky warning messages at compile.
1239 * src/gdcmElValSet.cxx fixed both GetElValue methods
1240 * Dicts/dicomV3.dic falacious entry [7fe0 0010 OT PXL Pixel Data]
1241 due to IdoDude was cleaned out.
1243 2002-10-21 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1244 * src/gdcmHeader.cxx RecupLgr split in FindVR and RecupLgr. FindVR
1245 concentrates on finding the value representation (when it exists).
1246 RecupLgr now only finds the element value length, and it avoids
1247 returning the unecessary skL (skipped length).
1248 Also, offsetCourant was simply removed (with taille_fich) since
1249 it was redundant with the File position internals (by using
1250 ftell and fseek). This also made skL (see above in RecupLgr) usage
1252 * src/gdcmHeaderIdo.cxx src/gdcmIdo.h added. Those files concentrate
1253 on the libido specificities which are handled through class
1255 * Test/implicit_vr.dcm dicom v3 in implicit value representation
1258 2002-10-17 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1259 * Truckload of changes. Parsing of header is barely functional
1260 (see Test/test) with the standard dictionary (see Dicts/dicomV3.dic).
1262 2002-10-10 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1263 * src/gdcmHeader.cxx many addons of low level methods
1265 2002-10-07 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1266 * src/gdcmHeader now contains_IdDcmCheckSwap, _IdDcmRecupLgr,
1267 and _IdDcmSWAP_LONG.
1269 2002-09-12 Eric Boix <Eric.Boix@creatis.insa-lyon.fr>
1270 * This corresponds to all the changes decided at the meeting of
1271 May 23 2002. Needless to say we are running late...