1 # ---------------------------------------------------------------------
3 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
5 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
7 # This software is governed by the CeCILL-B license under French law and
8 # abiding by the rules of distribution of free software. You can use,
9 # modify and/ or redistribute the software under the terms of the CeCILL-B
10 # license as circulated by CEA, CNRS and INRIA at the following URL
11 # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
12 # or in the file LICENSE.txt.
14 # As a counterpart to the access to the source code and rights to copy,
15 # modify and redistribute granted by the license, users are provided only
16 # with a limited warranty and the software's author, the holder of the
17 # economic rights, and the successive licensors have only limited
20 # The fact that you are presently reading this means that you have had
21 # knowledge of the CeCILL-B license and that you accept its terms.
22 # ------------------------------------------------------------------------
28 function EEDreadlink() {
30 (cd "$DIR" && echo "$(pwd -P)")
34 #EED 2120-08-25 This code is not working in MacOS so we use EEDreadlink()
35 #EED scriptDirName=$(dirname $(Ereadlink -f $0) )
36 scriptDirName=$(dirname $(Ereadlink $0) )/Linux
38 #########################################################################
39 ############ Local Functions #######################################
40 #########################################################################
43 source scripts/LocalFunctions.sh
45 configureFile="scripts/CreaTools-configure.sh"
48 # default configuration parameters
49 OperatingSystem=`getDistrib`
51 generationdir=$HOME/Creatis/C11
58 loginGroupName=`groups | awk '{print $1}'`
62 export ETC_BASHRC=`getbashrc`
67 echo "installscript [options] command"
68 echo "creatools configure/compile/install script"
71 echo "OPTIONS ARE USE FOR CONFIGURATION ONLY: THEY WILL BE IGNORED IF <COMMAND> IS NOT \"CONFIG\" OR \"ALL\""
76 echo " as a normal user:"
77 echo " config : set the configuration parameters only"
79 echo " need root password:"
80 echo " 3rd : Get, Compile, Install all 3rd party library "
81 echo " 3rd-base : Install basic tools (cmake, doxygen...)"
82 echo " 3rd-vtk : Get, Compile, Install vtk"
83 echo " 3rd-itk : Get, Compile, Install itk"
84 echo " 3rd-gdcm : Get, Compile, Install gdcm"
85 echo " 3rd-wx : Get, Compile, Install wx widget (for Mac Users)"
86 echo " 3rd-wt : Get, Compile, Install wt"
88 echo " as a normal user:"
89 echo " creatools : Get Compile and Install the CreaTools"
90 echo " creatools-get : Get the CreaTools"
91 echo " creatools-cmp : Compile the CreaTools"
92 echo " creatools-install : Install the CreaTools"
94 echo " creatools-generateBinTGZ : generation of CreaTools.tgz (binary version)"
96 echo " uninstall : uninstall the creatools"
98 echo " printconfig : print the configuration"
99 echo " help : print help"
100 echo " env : print some environnement variables"
102 echo " all : configure / compile / install"
108 echo " configure options: !!!!! IGNORED IF COMMAND IS NOT CONFIG OR ALL !!!!!!"
109 echo " -os <os> : operating system distribution (default $OperatingSystem)"
110 echo " -ncore <n> : number of core to use (default $corenumber)"
111 echo " -gdir <dir> : generation directory (default $generationdir)"
112 echo " -instprefix <dir> : creatools install prefix"
113 echo " -instprefix3 <dir> : 3rd party library install prefix"
114 echo " -html : get creatools from HTML"
115 echo " -git : get creatools from git (CREATIS user only)"
116 echo " -git-read-only : get creatools from git (anonymously, no write access)"
117 echo " -build : build type Release, RelWithDebug or Debug (default RelWithDebug)"
119 echo " experimental configure options (use at your own risk!!):"
120 echo " -gdcm2 : use GDCM2 "
121 echo " -doc : generate documentation"
122 echo " -itk4 : use ITK4"
127 ##################################################
129 while [ $# -ge 1 ] ; do
131 -os) OperatingSystem=$2; shift 2;;
132 -ncore) corenumber=$2; shift 2;;
133 -gdir) generationdir=$2; shift 2;;
134 -instprefix) installPrefix=$2; shift 2;;
135 -instprefix3) installPrefixThird=$2; shift 2;;
136 -doc) docgeneration=ON; shift 1;;
137 -html) sourcesFrom=HTML; shift 1;;
138 -git) sourcesFrom=GIT; shift 1;;
139 -git-read-only) sourcesFrom=GIT-READ-ONLY;
141 -gdcm2) gdcmVersion=GDCM2; shift 1;;
142 -itk4) ITKVersion=ITK4; shift 1;;
143 -build) buildType=$2; shift 2;;
148 if [ $# -le 0 ] ; then usage; fi
152 # check that command is valid
153 if [ `checkVal $command all config 3rd 3rd-base 3rd-vtk 3rd-itk 3rd-gdcm 3rd-wx 3rd-wt creatools creatools-get creatools-cmp creatools-install creatools-generateBinTGZ uninstall printconfig help env` == "false" ] ; then
154 echo "Unrecognized command: $command"
160 ############################## use existing configuration if command is not config or all
161 if [ `checkVal $command config all` == false ] ; then
162 if [ ! -f $configureFile ] ; then
163 echo "scripts/CreaTools-configure.sh does not exists"
164 echo "please run the scripts with command \"config\" or \"all\""
167 source $configureFile
168 if [ ! -f $installPrefixThird/share/creatools/creatools_third_party_library_config.sh ] ; then
170 echo "the curently used Third Party libraries are NOT in $installPrefixThird but ... in :"
171 grep "installPrefixThird=" $ETC_BASHRC
172 echo "VTK_DIR : " $VTK_DIR
173 echo "ITK_DIR : " $ITK_DIR
174 echo "GDCM_DIR : " $GDCM_DIR
175 echo "(Have a look at $ETC_BASHRC=, edit it or run again Install Third Party Libraries if you disagree)"
182 ##################################################################################
183 ############################ check configuration parameters
185 checkDistrib $OperatingSystem
187 # complete default install prefix
188 if [ -z "$installPrefix" ] ; then installPrefix=$generationdir/ci; fi
189 if [ -z "$installPrefixThird" ] ; then installPrefixThird=$generationdir/tpli; fi
192 if [ `checkVal $buildType Release Debug RelWithDebug` == "false" ] ; then
193 echo "Unsupported build type: $buildType"
194 echo "Please use one of: Release Debug RelWithDebug"
199 ##################################################################################
200 ############################ write configuration file
201 if [ `checkVal $command config all` == true ] ; then
202 echo "#!/bin/bash" > $configureFile
203 echo >> $configureFile
204 echo "#File generated by 'installscript'" >> $configureFile
205 echo "#DO NOT edit !" >> $configureFile
206 echo "#(except if you *do* know what you do)" >> $configureFile
207 echo >> $configureFile
208 echo "OperatingSystem=$OperatingSystem" >> $configureFile
209 echo "corenumber=$corenumber" >> $configureFile
210 echo "generationdir=$generationdir" >> $configureFile
211 echo "installPrefix=$installPrefix" >> $configureFile
212 echo "installPrefixThird=$installPrefixThird" >> $configureFile
213 echo "docgeneration=$docgeneration" >> $configureFile
214 echo "sourcesFrom=$sourcesFrom" >> $configureFile
215 echo "loginUserName=$loginUserName" >> $configureFile
216 echo "loginGroupName=$loginGroupName" >> $configureFile
217 echo "buildType=$buildType" >> $configureFile
218 echo "gdcmVersion=$gdcmVersion" >> $configureFile
219 echo "ITKVersion=$ITKVersion" >> $configureFile
220 echo "ETC_BASHRC=$ETC_BASHRC" >> $configureFile
221 echo "TDx=$TDx" >> $configureFile
226 ################################### print current configuration
230 ##################################################################################
231 ##################################################################################
232 ############ Process commands
233 ##################################################################################
234 ##################################################################################
237 ################################################################################## config printconfig
238 # config or printconfig : already done
239 if [ `checkVal $command config printconfig` == true ] ; then
243 ################################################################################## creatools
245 if [ `checkVal $command all creatools creatools-get` == true ] ; then
246 bigDisplay "DOWNLOAD CREATOOLS"
247 bash scripts/CreaTools-load.sh
250 ################################################################################## 3rd library
251 # install packaged dependencies as root
252 if [ `checkVal $command all 3rd 3rd-base` == true ] ; then
253 bigDisplay "INSTALL PACKAGES DEPENDENCIES"
254 bash scripts/CreaTools-configure.sh
256 source ThirdParty-install-Base-Stuff.sh $OperatingSystem
258 bash scripts/ThirdParty-install.sh
262 if [ `checkVal $command all 3rd 3rd-vtk` == true ] ; then
263 bigDisplay "INSTALL VTK"
264 bash scripts/ThirdParty-install-VTK.sh
269 if [ `checkVal $command all 3rd 3rd-gdcm` == true ] ; then
270 bigDisplay "INSTALL $gdcmVersion"
271 bash scripts/ThirdParty-install-gdcm.sh
278 if [ `checkVal $command all 3rd 3rd-itk` == true ] ; then
279 bigDisplay "INSTALL $ITKVersion"
280 bash scripts/ThirdParty-install-ITK.sh
285 if [ `checkVal $command all 3rd 3rd-wt` == true ] ; then
286 bigDisplay "INSTALL WT"
287 bash scripts/ThirdParty-install-WT.sh
291 # Setup the user .bashrc correctly
292 if [ `checkVal $command all 3rd 3rd-vtk 3rd-itk 3rd-gdcm 3rd-wx 3rd-wt ` == true ] ; then
293 bigDisplay "FINALIZE 3RD PARTY LIBRARY INSTALLATION"
294 bash scripts/ThirdParty-install-Finalize.sh
295 if [ `checkVal $command 3rd 3rd-vtk 3rd-itk 3rd-gdcm 3rd-wx ` == true ] ; then
296 bigDisplay "Third Party Install Done"
297 bigDisplay "Please copy paste the following command or open a new terminal: source ~/.bashrc"
301 ################################################################################## creatools
303 if [ `checkVal $command all creatools creatools-cmp` == true ] ; then
304 bigDisplay "COMPILE CREATOOLS"
305 echo "EED installscript compile creatools"
308 bash -x scripts/CreaTools-compile.sh
310 # To allow (*very* aware) user to patch code, later
311 if [ ! -e $generationdir/creatools_source ] ; then
312 echo "You probabely made a mistake : "
313 echo "Directory $loginUserName $generationdir/creatools_source not found"
314 echo "Make sure you know the mistake"
315 echo "Hit any key to continue"
316 echo "Fix the mistake!"
319 chown -R $loginUserName $generationdir/creatools_source
320 chgrp -R $loginGroupName $generationdir/creatools_source
325 if [ `checkVal $command all creatools creatools-install` == true ] ; then
326 bigDisplay "INSTALL CREATOOLS"
328 bash scripts/CreaTools-install.sh
334 echo "Open a new terminal to run creatools."
335 echo "(Close this window and continue....) "
338 ##EED read -p "Press [Enter] key to continue..."
341 #generate TGZ version of the bin (Creatools and ThirdParty)
342 if [ `checkVal $command creatools-generateBinTGZ` == true ] ; then
343 bash scripts/CreaTools-GenerateBinTGZ.sh
346 ################################################################################## uninstall
347 if [ `checkVal $command uninstall` == true ] ; then
348 bigDisplay "UNINSTALL CREATOOLS"
349 bash scripts/CreaTools-uninstall.sh
352 ################################################################################## help
353 if [ `checkVal $command help` == true ] ; then
357 ################################################################################## print env variables
358 if [ `checkVal $command env` == true ] ; then
359 if [ ! -f $installPrefixThird/share/creatools_third_party_library_config.sh ] ; then
362 echo "the curently used Third Party libraries are NOT in $installPrefixThird but in :"
363 grep "installPrefixThird=" $ETC_BASHRC
364 echo "VTK_DIR : " $VTK_DIR
365 echo "ITK_DIR : " $ITK_DIR
366 echo "GDCM_DIR : " $GDCM_DIR
368 echo "installPrefixThird ... " $installPrefixThird
371 if [ -f $installPrefixThird/share/creatools_third_party_library_config.sh ] ; then
372 echo "Third party config file : " $installPrefixThird/share/creatools_third_party_library_config.sh
374 cat $installPrefixThird/share/creatools_third_party_library_config.sh
380 if [ -f $installPrefix/share/creatools_base_library_config.sh ] ; then
381 echo "Creatools base library config file : " $installPrefix/share/creatools_base_library_config.sh
383 cat $installPrefix/share/creatools_base_library_config.sh
386 echo "installPrefix ... " $installPrefix
390 echo "VTK_DIR : " $VTK_DIR
391 echo "ITK_DIR : " $ITK_DIR
392 echo "GDCM_DIR : " $GDCM_DIR
394 echo "crea_DIR : " $crea_DIR
395 echo "BBTK_DIR : " $BBTK_DIR
396 echo "creaMaracasVisu_DIR : " $creaMaracasVisu_DIR
397 echo "creaEnvironment_DIR : " $creaEnvironment_DIR
398 echo "creaBruker_DIR : " $creaBruker_DIR
399 echo "creaImageIO_DIR : " $creaImageIO_DIR
400 echo "creaContours_DIR : " $creaContours_DIR
401 echo "creaRigidRegistration_DIR :" $creaRigidRegistration_DIR
402 echo "bbtkGEditor_DIR : " $bbtkGEditor_DIR
403 echo "creaTools_DIR : " $creaTools_DIR
404 echo "creaMiniTools_DIR : " $creaMiniTools_DIR
405 echo "Ido_DIR : " $Ido_DIR
406 echo "==================================="