Testing/CMakeLists.txt

   1 # CMakeLists for Testing purpose
   2 # Cxx file that need a file to run should be place aproprietly
   3
   4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
   5
   6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
   7
   8 # add test that does not require data:
   9 # They usally return if no argument is given
  10 SET(TEST_SOURCES
  11   TestBug.cxx
  12   TestDcm2Acr.cxx
  13   TestHash.cxx
  14   TestWrite.cxx
  15   TestReadWriteReadCompare.cxx
  16   TestWriteSimple.cxx
  17 )
  18
  19 # add tests that require data
  20 IF (GDCM_DATA_ROOT)
  21   SET(TEST_SOURCES ${TEST_SOURCES}
  22     #PrintHeader.cxx       #require test.acr
  23     PrintAllDocument.cxx     #require test.acr
  24     PrintDicomDir.cxx
  25     TestFindTags.cxx
  26     TestChangeHeader.cxx
  27     TestDicomDir.cxx      #require DICOMDIR
  28     BuildUpDicomDir.cxx
  29     makeDicomDir.cxx
  30   )
  31   # add test that require VTK:
  32   IF(GDCM_VTK)
  33     INCLUDE_DIRECTORIES(
  34       ${GDCM_SOURCE_DIR}/vtk/
  35       )
  36     SET(TEST_SOURCES ${TEST_SOURCES}
  37       ShowDicom.cxx
  38       )
  39   ENDIF(GDCM_VTK)
  40 ENDIF (GDCM_DATA_ROOT)
  41
  42
  43
  44 # include stuff
  45 INCLUDE_DIRECTORIES(
  46   ${GDCM_SOURCE_DIR}/src/
  47   ${GDCM_BINARY_DIR}/
  48 )
  49
  50 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
  51 ADD_EXECUTABLE(gdcmTests ${Tests})
  52 IF(GDCM_VTK)
  53   TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
  54 ELSE(GDCM_VTK)
  55   TARGET_LINK_LIBRARIES(gdcmTests gdcm)
  56 ENDIF(GDCM_VTK)
  57
  58 SET (TestsToRun ${Tests})
  59 REMOVE (TestsToRun gdcmTests.cxx)
  60
  61 # Loop over files and create executables
  62 FOREACH(file ${TEST_SOURCES})
  63   GET_FILENAME_COMPONENT(name ${file} NAME_WE)
  64 #  IF (GDCM_DATA_ROOT)
  65 #    ADD_TEST(${name} ${GDCM_TESTS} ${name}
  66 #        -D ${GDCM_DATA_ROOT}
  67 #        -T ${GDCM_BINARY_DIR}/Testing/Temporary
  68 #        -V Baseline/gdcm/${name}.png)
  69 #  ELSE (GDCM_DATA_ROOT)
  70     ADD_TEST(${name} ${GDCM_TESTS} ${name})
  71 #  ENDIF (GDCM_DATA_ROOT)
  72 ENDFOREACH(file ${TEST_SOURCES})
  73
  74 #-----------------------------------------------------------------------------
  75
  76 # We need to test the reading of all dicom images in the gdcmData directory
  77 # First parse this directory and extract all images
  78
  79 IF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  80   FILE(GLOB GDCM_DATA_IMAGES_GLOB
  81     "${GDCM_DATA_ROOT}/*.acr"
  82     "${GDCM_DATA_ROOT}/*.dcm"
  83 #    "${GDCM_DATA_ROOT}/*.nema"
  84     "${GDCM_DATA_ROOT}/*.ima"
  85     )
  86 ELSE(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  87   # Since there is a bug in cmake 1.8.3, I'll have to do two separate globs
  88   FILE(GLOB GDCM_DATA_IMAGES_GLOB_ACR
  89     "${GDCM_DATA_ROOT}/*.acr"
  90     )
  91   FILE(GLOB GDCM_DATA_IMAGES_GLOB_DCM
  92     "${GDCM_DATA_ROOT}/*.dcm"
  93     )
  94   FILE(GLOB GDCM_DATA_IMAGES_GLOB_NEMA
  95 #    "${GDCM_DATA_ROOT}/*.nema"
  96     )
  97   FILE(GLOB GDCM_DATA_IMAGES_GLOB_IMA
  98     "${GDCM_DATA_ROOT}/*.ima"
  99     )
 100   SET(GDCM_DATA_IMAGES_GLOB
 101     ${GDCM_DATA_IMAGES_GLOB_DCM} ${GDCM_DATA_IMAGES_GLOB_ACR}
 102     ${GDCM_DATA_IMAGES_GLOB_NEMA} ${GDCM_DATA_IMAGES_GLOB_IMA})
 103   #SET(GDCM_DATA_IMAGES_GLOB  ${GDCM_DATA_IMAGES_GLOB_ACR})
 104 ENDIF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
 105
 106 # Black list of images known to break lots of readers (efilm, xmedcon ...):
 107 SET(BLACK_LIST
 108   "gdcm-JPEG-LossLessThoravision.dcm" # serial killer
 109   "cr172241.dcm"           #temporarily remove as it kills my gnome session (but not kde)
 110   "emptyImage.dcm"         #the png looks ugly...
 111   "gdcm-MR-PHILIPS-16-Multi-Seq.fixed.dcm" #weird looks exactly the same as gdcm-MR-PHILIPS-16-Multi-Seq.dcm
 112   "gdcm-MR-PHILIPS-16.dcm" #png looks ugly
 113   "irmPhlipsNew1.dcm"      #png looks ugly
 114   "mriThruVPRO.dcm"        #png looks ugly
 115   "US.3405.1.dcm"          #looks exactly the same as US.1.2.dcm
 116   "8BitsRunLengthColor.dcm"    # Write dicom broken
 117   "8BitsUncompressedColor.dcm" # Write dicom broken
 118   "OT-PAL-8-face.dcm"          # Write dicom broken
 119   "US-PAL-8-10x-echo.dcm"      # Write dicom broken
 120   )
 121
 122 #   gdcm-ACR-LibIDO seems to be cut
 123 #   test.acr is very bright
 124
 125 # This is a GLOB expression, change it into a list separated with a comma and \n
 126 SET(GDCM_DATA_IMAGES)
 127 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
 128   GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
 129   STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
 130   IF(NOT bad_dicom)
 131     SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
 132   ENDIF(NOT bad_dicom)
 133 ENDFOREACH(filename)
 134
 135 # Populate GDCM_DATA_IMAGES:
 136 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
 137   "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
 138   )