1 # CMakeLists for Testing purpose
2 # Cxx file that need a file to run should be place aproprietly
4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
8 # add test that does not require data:
9 # They usally return if no argument is given
22 TestDicomDirElement.cxx
28 SET(TEST_SOURCES ${TEST_SOURCES}
33 # add tests that require data
35 SET(TEST_SOURCES ${TEST_SOURCES}
38 TestLoadAllDocumentsNoPrivNoSeq.cxx # includes generated gdcmDataImages.h
39 TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
40 #TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
41 TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
42 TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
43 #TestCopyDicom.cxx # includes generated gdcmDataImages.h
44 # TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
48 TestDicomDir.cxx # require DICOMDIR
49 TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
50 TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
51 TestSerieHelper.cxx # uses gdcmData as a default root directory
53 TestValidate.cxx #Just to have on overviews of oddities ...
55 # add test that require VTK:
57 IF("${VTK_MAJOR_VERSION}" LESS 4)
58 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !")
59 ELSE("${VTK_MAJOR_VERSION}" LESS 4)
60 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
61 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
62 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
63 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
64 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
65 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
66 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
67 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
68 # Include the VTK library since we know this is going to work
69 INCLUDE(${VTK_USE_FILE})
72 ${GDCM_SOURCE_DIR}/vtk
74 SET(TEST_SOURCES ${TEST_SOURCES}
80 ENDIF("${VTK_MAJOR_VERSION}" LESS 4)
82 ENDIF (GDCM_DATA_ROOT)
88 ${GDCM_SOURCE_DIR}/src
92 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
93 ADD_EXECUTABLE(gdcmTests ${Tests})
96 TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
98 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
101 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
104 SET (TestsToRun ${Tests})
105 REMOVE (TestsToRun gdcmTests.cxx)
107 # Loop over files and create executables
108 FOREACH(file ${TEST_SOURCES})
109 GET_FILENAME_COMPONENT(name ${file} NAME_WE)
110 ADD_TEST(${name} ${GDCM_TESTS} ${name})
111 ENDFOREACH(file ${TEST_SOURCES})
113 #-----------------------------------------------------------------------------
115 # We need to test the reading of all dicom images in the gdcmData directory
116 # First parse this directory and extract all images
118 FILE(GLOB GDCM_DATA_IMAGES_GLOB
119 "${GDCM_DATA_ROOT}/*.acr"
120 "${GDCM_DATA_ROOT}/*.dcm"
121 "${GDCM_DATA_ROOT}/*.nema"
122 "${GDCM_DATA_ROOT}/*.ima"
125 # Black list of images known to break lots of readers (efilm, xmedcon ...):
127 # Multiframe Papyrus format image
128 # Just to remember this format exists, and is gdcm::File compliant
129 # (NOT gdcm::FileHelper ...)
130 # any contribution is welcome
131 "PET-cardio-Multiframe-Papyrus.dcm"
132 # From David Clunie's Compresion Dataset
133 "D_CLUNIE_CT1_JLSN.dcm"
134 "D_CLUNIE_CT1_JLSL.dcm"
135 #Not a Dicom Image, but a RT Object
136 "RS2.16.124.113534.2.3.5.0.120040728.21342.353.12747_anonimized.dcm"
138 "ETIAM_video_002.dcm"
139 #Something stupid occured in the code for LibIDO images.
140 #I Black list them for a while. JP
141 #"gdcm-ACR-LibIDO.acr"
142 "LIBIDO-24-ACR_NEMA-Rectangle.dcm"
143 #16 Bits per pixel images with LUT 16 Bits.
144 #I wait to be 100% sure before releasing them. JP
147 # Jasper cannot handle this image, only kakadu so far, unless you patch jasper
148 # but then it breaks other images...
149 "CT_Phillips_JPEG2K_Decompr_Problem.dcm"
153 #Still cause troubles (see the .README.txt file for more details)
154 "MR_Philips_Intera_in_SQ_2001_e05f_item_wrong_lgt_use_NOSHADOWSEQ.dcm"
155 "MR_Philips_Intera_PrivateSequenceExplicitVR.dcm"
156 #The 2 previous images are identical !
157 #--> Replaced by more significant name
158 "MR_Philips_Intera_PrivateSequenceExplicitVR_in_SQ_2001_e05f_item_wrong_lgt_use_NOSHADOWSEQ.dcm"
160 #hexedit shows something *very* strange around offset 0x76e !
161 #the images looks *over*corrupted (on disc, not from the manufacturer!)
162 "MR_Philips_Intera_PrivateSequenceImplicitVR.dcm"
164 # Seems this one hangs on 64 bits processors ?!?
165 # I blacklist it untill the pb is solved.
166 # (to get some more green on the Dasboards)
167 "MR_Philips-Intera_BreaksNOSHADOW.dcm"
170 # Create a specific list of dicom files that we know are part of a sequence
172 "SIEMENS_MAGNETOM-12-MONO2-FileSeq[0-9].dcm"
175 # Add a special test that requires dciodvfy from dicom3tools
176 INCLUDE(${GDCM_SOURCE_DIR}/CMake/FindDicom3Tools.cmake)
178 # This is a GLOB expression, change it into a list separated with a comma and \n
179 SET(GDCM_DATA_IMAGES)
180 SET(GDCM_DATA_SEQ_IMAGES)
181 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
182 GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
184 ADD_TEST("DCIODVFY-INPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${filename}")
185 ADD_TEST("DCIODVFY-OUTPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${GDCM_DATA_ROOT}/BaselineDicom/${filename_temp}")
186 ENDIF(DCIODVFY_FOUND)
187 STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
189 SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
190 # SEQ_LIST is a regular expression:
191 STRING(REGEX MATCH ${SEQ_LIST} is_seq ${filename_temp})
193 SET(GDCM_DATA_SEQ_IMAGES "${GDCM_DATA_SEQ_IMAGES}\n\"${filename_temp}\",")
198 # Populate GDCM_DATA_IMAGES:
199 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
200 "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
203 # Populate GDCM_DATA_SEQ_IMAGES:
204 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataSeqImages.h"
205 "const char * const gdcmDataSeqImages[] = { ${GDCM_DATA_SEQ_IMAGES}\n0 };\n"
208 #-----------------------------------------------------------------------------
209 # Trying to solve a bizarre problem when loading shared lib if gdcm is static
210 # Therefore I disable the test when building SHAREDLIBS
211 IF(UNIX AND NOT BUILD_SHARED_LIBS)
212 ADD_LIBRARY(dynmodule MODULE dynmodule.cxx)
213 TARGET_LINK_LIBRARIES(dynmodule gdcm)
214 ADD_EXECUTABLE(loadmodule loadmodule.cxx )
215 TARGET_LINK_LIBRARIES(loadmodule gdcm -ldl)
216 ADD_TEST(loadmodule ${CXX_TEST_PATH}/loadmodule)
217 ENDIF(UNIX AND NOT BUILD_SHARED_LIBS)