1 # CMakeLists for Testing purpose
2 # Cxx file that need a file to run should be place aproprietly
4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
8 # add test that does not require data:
9 # They usally return if no argument is given
23 TestDicomDirElement.cxx
26 TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
29 SET(TEST_SOURCES ${TEST_SOURCES}
34 # add tests that require data
36 SET(TEST_SOURCES ${TEST_SOURCES}
39 TestLoadAllDocumentsNoPrivNoSeq.cxx # includes generated gdcmDataImages.h
40 #TestLoadAllDocumentsNoShadow.cxx # includes generated gdcmDataImages.h
41 TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
42 #TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
43 TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
44 TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
45 #TestCopyDicom.cxx # includes generated gdcmDataImages.h
46 # TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
50 TestDicomDir.cxx # require DICOMDIR
52 TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
53 TestSerieHelper.cxx # uses gdcmData as a default root directory
55 TestValidate.cxx #Just to have on overviews of oddities ...
57 # add test that require VTK:
59 IF("${VTK_MAJOR_VERSION}" LESS 4)
60 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !")
61 ELSE("${VTK_MAJOR_VERSION}" LESS 4)
62 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
63 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
64 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
65 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
66 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
67 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
68 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
69 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
70 # Include the VTK library since we know this is going to work
71 INCLUDE(${VTK_USE_FILE})
74 ${GDCM_SOURCE_DIR}/vtk
76 SET(TEST_SOURCES ${TEST_SOURCES}
82 ENDIF("${VTK_MAJOR_VERSION}" LESS 4)
84 ENDIF (GDCM_DATA_ROOT)
90 ${GDCM_SOURCE_DIR}/src
94 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
95 ADD_EXECUTABLE(gdcmTests ${Tests})
98 TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
100 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
101 ENDIF(GDCM_DATA_ROOT)
103 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
106 SET (TestsToRun ${Tests})
107 REMOVE (TestsToRun gdcmTests.cxx)
109 # Loop over files and create executables
110 FOREACH(file ${TEST_SOURCES})
111 GET_FILENAME_COMPONENT(name ${file} NAME_WE)
112 ADD_TEST(${name} ${GDCM_TESTS} ${name})
113 ENDFOREACH(file ${TEST_SOURCES})
115 #-----------------------------------------------------------------------------
117 # We need to test the reading of all dicom images in the gdcmData directory
118 # First parse this directory and extract all images
120 FILE(GLOB GDCM_DATA_IMAGES_GLOB
121 "${GDCM_DATA_ROOT}/*.acr"
122 "${GDCM_DATA_ROOT}/*.dcm"
123 "${GDCM_DATA_ROOT}/*.nema"
124 "${GDCM_DATA_ROOT}/*.ima"
127 # Black list of images known to break lots of readers (efilm, xmedcon ...):
129 # Multiframe Papyrus format image
130 # Just to remember this format exists, and is gdcm::File compliant
131 # (NOT gdcm::FileHelper ...)
132 # any contribution is welcome
133 "PET-cardio-Multiframe-Papyrus.dcm"
134 # From David Clunie's Compresion Dataset
135 "D_CLUNIE_CT1_JLSN.dcm"
136 "D_CLUNIE_CT1_JLSL.dcm"
137 #Not a Dicom Image, but a RT Object
138 "RS2.16.124.113534.2.3.5.0.120040728.21342.353.12747_anonimized.dcm"
140 "ETIAM_video_002.dcm"
141 #Something stupid occured in the code for LibIDO images.
142 #I Black list them for a while. JP
143 #"gdcm-ACR-LibIDO.acr"
144 "LIBIDO-24-ACR_NEMA-Rectangle.dcm"
145 #16 Bits per pixel images with LUT 16 Bits.
146 #I wait to be 100% sure before releasing them. JP
149 # Jasper cannot handle this image, only kakadu so far, unless you patch jasper
150 # but then it breaks other images...
151 "CT_Phillips_JPEG2K_Decompr_Problem.dcm"
155 #Still cause troubles (see the .README.txt file for more details)
156 "MR_Philips_Intera_in_SQ_2001_e05f_item_wrong_lgt_use_NOSHADOWSEQ.dcm"
157 "MR_Philips_Intera_PrivateSequenceExplicitVR.dcm"
158 #The 2 previous images are identical !
159 #--> Replaced by more significant name
160 "MR_Philips_Intera_PrivateSequenceExplicitVR_in_SQ_2001_e05f_item_wrong_lgt_use_NOSHADOWSEQ.dcm"
162 #hexedit shows something *very* strange around offset 0x76e !
163 #the images looks *over*corrupted (on disc, not from the manufacturer!)
164 "MR_Philips_Intera_PrivateSequenceImplicitVR.dcm"
166 # Seems this one hangs on 64 bits processors ?!?
167 # I blacklist it untill the pb is solved.
168 # (to get some more green on the Dasboards)
169 "MR_Philips-Intera_BreaksNOSHADOW.dcm"
172 # Create a specific list of dicom files that we know are part of a sequence
174 "SIEMENS_MAGNETOM-12-MONO2-FileSeq[0-9].dcm"
177 # Add a special test that requires dciodvfy from dicom3tools
178 INCLUDE(${GDCM_SOURCE_DIR}/CMake/FindDicom3Tools.cmake)
180 # This is a GLOB expression, change it into a list separated with a comma and \n
181 SET(GDCM_DATA_IMAGES)
182 SET(GDCM_DATA_SEQ_IMAGES)
183 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
184 GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
186 ADD_TEST("DCIODVFY-INPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${filename}")
187 ADD_TEST("DCIODVFY-OUTPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${GDCM_DATA_ROOT}/BaselineDicom/${filename_temp}")
188 ENDIF(DCIODVFY_FOUND)
189 STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
191 SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
192 # SEQ_LIST is a regular expression:
193 STRING(REGEX MATCH ${SEQ_LIST} is_seq ${filename_temp})
195 SET(GDCM_DATA_SEQ_IMAGES "${GDCM_DATA_SEQ_IMAGES}\n\"${filename_temp}\",")
200 # Populate GDCM_DATA_IMAGES:
201 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
202 "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
205 # Populate GDCM_DATA_SEQ_IMAGES:
206 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataSeqImages.h"
207 "const char * const gdcmDataSeqImages[] = { ${GDCM_DATA_SEQ_IMAGES}\n0 };\n"
210 #-----------------------------------------------------------------------------
211 # Trying to solve a bizarre problem when loading shared lib if gdcm is static
212 # Therefore I disable the test when building SHAREDLIBS
213 IF(UNIX AND NOT BUILD_SHARED_LIBS)
214 ADD_LIBRARY(dynmodule MODULE dynmodule.cxx)
215 TARGET_LINK_LIBRARIES(dynmodule gdcm)
216 ADD_EXECUTABLE(loadmodule loadmodule.cxx )
217 TARGET_LINK_LIBRARIES(loadmodule gdcm -ldl)
218 ADD_TEST(loadmodule ${CXX_TEST_PATH}/loadmodule)
219 ENDIF(UNIX AND NOT BUILD_SHARED_LIBS)
222 #-----------------------------------------------------------------------------
223 # Do the build against an installed gdcm
224 SET(GDCM_TEST_INSTALL_LEFT "${CMAKE_INSTALL_PREFIX}")
225 SET(GDCM_TEST_INSTALL_RIGHT "${GDCM_BINARY_DIR}/InstallTest/Root")
226 STRING(COMPARE EQUAL "${GDCM_TEST_INSTALL_LEFT}" "${GDCM_TEST_INSTALL_RIGHT}"
228 IF(GDCM_TEST_INSTALL)
230 ${CMAKE_CTEST_COMMAND}
231 # ${GDCM_INSTALL_TEST_CONFIG_TYPE}
232 --build-and-test ${CMAKE_SOURCE_DIR} ${CMAKE_BINARY_DIR}
233 --build-generator ${CMAKE_GENERATOR}
235 --build-makeprogram ${CMAKE_MAKE_PROGRAM}
237 --build-target install)
238 ENDIF(GDCM_TEST_INSTALL)