1 # CMakeLists for Testing purpose
2 # Cxx file that need a file to run should be place aproprietly
4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
8 # add test that does not require data:
9 # They usally return if no argument is given
21 TestDicomDirElement.cxx
26 SET(TEST_SOURCES ${TEST_SOURCES}
31 # add tests that require data
33 SET(TEST_SOURCES ${TEST_SOURCES}
36 TestLoadAllDocumentsNoPrivNoSeq.cxx # includes generated gdcmDataImages.h
37 TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
38 #TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
39 TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
40 TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
41 #TestCopyDicom.cxx # includes generated gdcmDataImages.h
42 # TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
46 TestDicomDir.cxx # require DICOMDIR
47 TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
48 TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
49 TestSerieHelper.cxx # uses gdcmData as a default root directory
51 TestValidate.cxx #Just to have on overviews of oddities ...
53 # add test that require VTK:
55 IF("${VTK_MAJOR_VERSION}" LESS 4)
56 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !")
57 ELSE("${VTK_MAJOR_VERSION}" LESS 4)
58 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
59 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
60 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
61 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
62 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
63 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
64 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
65 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
66 # Include the VTK library since we know this is going to work
67 INCLUDE(${VTK_USE_FILE})
70 ${GDCM_SOURCE_DIR}/vtk
72 SET(TEST_SOURCES ${TEST_SOURCES}
78 ENDIF("${VTK_MAJOR_VERSION}" LESS 4)
80 ENDIF (GDCM_DATA_ROOT)
86 ${GDCM_SOURCE_DIR}/src
90 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
91 ADD_EXECUTABLE(gdcmTests ${Tests})
93 TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
95 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
98 SET (TestsToRun ${Tests})
99 REMOVE (TestsToRun gdcmTests.cxx)
101 # Loop over files and create executables
102 FOREACH(file ${TEST_SOURCES})
103 GET_FILENAME_COMPONENT(name ${file} NAME_WE)
104 ADD_TEST(${name} ${GDCM_TESTS} ${name})
105 ENDFOREACH(file ${TEST_SOURCES})
107 #-----------------------------------------------------------------------------
109 # We need to test the reading of all dicom images in the gdcmData directory
110 # First parse this directory and extract all images
112 FILE(GLOB GDCM_DATA_IMAGES_GLOB
113 "${GDCM_DATA_ROOT}/*.acr"
114 "${GDCM_DATA_ROOT}/*.dcm"
115 "${GDCM_DATA_ROOT}/*.nema"
116 "${GDCM_DATA_ROOT}/*.ima"
119 # Black list of images known to break lots of readers (efilm, xmedcon ...):
121 # Multiframe Papyrus format image
122 # Just to remember this format exists, and is gdcm::File compliant
123 # (NOT gdcm::FileHelper ...)
124 # any contribution is welcome
125 "PET-cardio-Multiframe-Papyrus.dcm"
126 # From David Clunie's Compresion Dataset
127 "D_CLUNIE_CT1_JLSN.dcm"
128 "D_CLUNIE_CT1_JLSL.dcm"
129 #Not a Dicom Image, but a RT Object
130 "RS2.16.124.113534.2.3.5.0.120040728.21342.353.12747_anonimized.dcm"
132 "ETIAM_video_002.dcm"
133 #Something stupid occured in the code for LibIDO images.
134 #I Black list them for a while. JP
135 "gdcm-ACR-LibIDO.acr"
136 "LIBIDO-24-ACR_NEMA-Rectangle.dcm"
137 #16 Bits per pixel images with LUT 16 Bits.
138 #I wait to be 100% sure before releasing them. JP
141 # Jasper cannot handle this image, only kakadu so far, unless you patch jasper
142 # but then it breaks other images...
143 "CT_Phillips_JPEG2K_Decompr_Problem.dcm"
147 # I probabely messed up smething with the .png, .tst of
148 # the images I recently added to the Test Suite
149 # I Black list them, until I find where is the pb.
150 "US-RGB-8-esopecho.dcm"
151 "MR_Philips_Intera_No_PrivateSequenceImplicitVR.dcm"
152 "MR_Philips_Intera_PrivateSequenceImplicitVR.dcm"
153 "MR_SIEMENS_forceLoad29-1010_29-1020.dcm"
154 # An element contains a value of 4, but no data follows
155 # So, the next (group, elem) is not correctly read
156 "gdcm-MR-PHILIPS-16-Multi-Seq.dcm"
159 # Create a specific list of dicom files that we know are part of a sequence
161 "SIEMENS_MAGNETOM-12-MONO2-FileSeq[0-9].dcm"
164 # Add a special test that requires dciodvfy from dicom3tools
165 INCLUDE(${GDCM_SOURCE_DIR}/CMake/FindDicom3Tools.cmake)
167 # This is a GLOB expression, change it into a list separated with a comma and \n
168 SET(GDCM_DATA_IMAGES)
169 SET(GDCM_DATA_SEQ_IMAGES)
170 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
171 GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
173 ADD_TEST("DCIODVFY-INPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${filename}")
174 ADD_TEST("DCIODVFY-OUTPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${GDCM_DATA_ROOT}/BaselineDicom/${filename_temp}")
175 ENDIF(DCIODVFY_FOUND)
176 STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
178 SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
179 # SEQ_LIST is a regular expression:
180 STRING(REGEX MATCH ${SEQ_LIST} is_seq ${filename_temp})
182 SET(GDCM_DATA_SEQ_IMAGES "${GDCM_DATA_SEQ_IMAGES}\n\"${filename_temp}\",")
187 # Populate GDCM_DATA_IMAGES:
188 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
189 "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
192 # Populate GDCM_DATA_SEQ_IMAGES:
193 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataSeqImages.h"
194 "const char * const gdcmDataSeqImages[] = { ${GDCM_DATA_SEQ_IMAGES}\n0 };\n"
197 #-----------------------------------------------------------------------------
198 # Trying to solve a bizarre problem when loading shared lib if gdcm is static
199 # Therefore I disable the test when building SHAREDLIBS
200 IF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)
201 ADD_LIBRARY(dynmodule MODULE dynmodule.cxx)
202 TARGET_LINK_LIBRARIES(dynmodule gdcm)
203 ADD_EXECUTABLE(loadmodule loadmodule.cxx )
204 TARGET_LINK_LIBRARIES(loadmodule gdcm -ldl)
205 ADD_TEST(loadmodule ${CXX_TEST_PATH}/loadmodule)
206 ENDIF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)