Testing/CMakeLists.txt

   1 # CMakeLists for Testing purpose
   2 # Cxx file that need a file to run should be place aproprietly
   3
   4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
   5
   6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
   7
   8 # add test that does not require data:
   9 # They usally return if no argument is given
  10 SET(TEST_SOURCES
  11   TestBug.cxx
  12   TestHash.cxx
  13 )
  14
  15 # add tests that require data
  16 IF (GDCM_DATA_ROOT)
  17   SET(TEST_SOURCES ${TEST_SOURCES}
  18     TestReadWriteReadCompare.cxx     # includes generated gdcmDataImages.h
  19     PrintAllDocument.cxx             # includes generated gdcmDataImages.h
  20     TestAllReadCompareDicom.cxx      # includes generated gdcmDataImages.h
  21     TestAllEntryVerify.cxx           # includes generated gdcmDataImages.h
  22     PrintDicomDir.cxx
  23     TestChangeHeader.cxx
  24     TestDicomDir.cxx      #require DICOMDIR
  25     BuildUpDicomDir.cxx
  26     makeDicomDir.cxx
  27   )
  28   # add test that require VTK:
  29   IF(GDCM_VTK)
  30     INCLUDE_DIRECTORIES(
  31       ${GDCM_SOURCE_DIR}/vtk/
  32       )
  33     SET(TEST_SOURCES ${TEST_SOURCES}
  34       ShowDicom.cxx
  35       )
  36   ENDIF(GDCM_VTK)
  37 ENDIF (GDCM_DATA_ROOT)
  38
  39
  40
  41 # include stuff
  42 INCLUDE_DIRECTORIES(
  43   ${GDCM_SOURCE_DIR}/src/
  44   ${GDCM_BINARY_DIR}/
  45 )
  46
  47 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
  48 ADD_EXECUTABLE(gdcmTests ${Tests})
  49 IF(GDCM_VTK)
  50   TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
  51 ELSE(GDCM_VTK)
  52   TARGET_LINK_LIBRARIES(gdcmTests gdcm)
  53 ENDIF(GDCM_VTK)
  54
  55 SET (TestsToRun ${Tests})
  56 REMOVE (TestsToRun gdcmTests.cxx)
  57
  58 # Loop over files and create executables
  59 FOREACH(file ${TEST_SOURCES})
  60   GET_FILENAME_COMPONENT(name ${file} NAME_WE)
  61 #  IF (GDCM_DATA_ROOT)
  62 #    ADD_TEST(${name} ${GDCM_TESTS} ${name}
  63 #        -D ${GDCM_DATA_ROOT}
  64 #        -T ${GDCM_BINARY_DIR}/Testing/Temporary
  65 #        -V Baseline/gdcm/${name}.png)
  66 #  ELSE (GDCM_DATA_ROOT)
  67     ADD_TEST(${name} ${GDCM_TESTS} ${name})
  68 #  ENDIF (GDCM_DATA_ROOT)
  69 ENDFOREACH(file ${TEST_SOURCES})
  70
  71 #-----------------------------------------------------------------------------
  72
  73 # We need to test the reading of all dicom images in the gdcmData directory
  74 # First parse this directory and extract all images
  75
  76 IF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  77   FILE(GLOB GDCM_DATA_IMAGES_GLOB
  78     "${GDCM_DATA_ROOT}/*.acr"
  79     "${GDCM_DATA_ROOT}/*.dcm"
  80 #    "${GDCM_DATA_ROOT}/*.nema"
  81     "${GDCM_DATA_ROOT}/*.ima"
  82     )
  83 ELSE(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  84   # Since there is a bug in cmake 1.8.3, I'll have to do two separate globs
  85   FILE(GLOB GDCM_DATA_IMAGES_GLOB_ACR
  86     "${GDCM_DATA_ROOT}/*.acr"
  87     )
  88   FILE(GLOB GDCM_DATA_IMAGES_GLOB_DCM
  89     "${GDCM_DATA_ROOT}/*.dcm"
  90     )
  91   FILE(GLOB GDCM_DATA_IMAGES_GLOB_NEMA
  92 #    "${GDCM_DATA_ROOT}/*.nema"
  93     )
  94   FILE(GLOB GDCM_DATA_IMAGES_GLOB_IMA
  95     "${GDCM_DATA_ROOT}/*.ima"
  96     )
  97   SET(GDCM_DATA_IMAGES_GLOB
  98     ${GDCM_DATA_IMAGES_GLOB_DCM} ${GDCM_DATA_IMAGES_GLOB_ACR}
  99     ${GDCM_DATA_IMAGES_GLOB_NEMA} ${GDCM_DATA_IMAGES_GLOB_IMA})
 100   #SET(GDCM_DATA_IMAGES_GLOB  ${GDCM_DATA_IMAGES_GLOB_ACR})
 101 ENDIF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
 102
 103 # Black list of images known to break lots of readers (efilm, xmedcon ...):
 104 SET(BLACK_LIST
 105   # serial killer
 106   "gdcm-JPEG-LossLessThoravision.dcm"
 107   #temporarily remove as it kills my gnome session (but not kde)
 108   "cr172241.dcm"
 109   #png looks ugly
 110   "emptyImage.dcm"
 111   #png looks ugly
 112   "irmPhlipsNew1.dcm"
 113   #png looks ugly
 114   "mriThruVPRO.dcm"
 115   #segfaults TestReadWriteReadCompare (same pb as below)
 116   "gdcm-MR-SIEMENS-16-1.acr"
 117   # see comments in gdcmData ref file TestAllEntryVerifyReference.txt
 118   "SIEMENS_GBS_III-16-ACR_NEMA_1.acr"
 119   #segfaults TestReadWriteReadCompare (pixels not parsed properly)
 120   "I9000001.dcm"
 121   # ditto
 122   "icone.dcm"
 123   # ditto
 124   "sonataMonaco.dcm"
 125   )
 126
 127 #   gdcm-ACR-LibIDO seems to be cut
 128 #   test.acr is very bright
 129
 130 # This is a GLOB expression, change it into a list separated with a comma and \n
 131 SET(GDCM_DATA_IMAGES)
 132 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
 133   GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
 134   STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
 135   IF(NOT bad_dicom)
 136     SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
 137   ENDIF(NOT bad_dicom)
 138 ENDFOREACH(filename)
 139
 140 # Populate GDCM_DATA_IMAGES:
 141 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
 142   "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
 143   )