1 # CMakeLists for Testing purpose
2 # Cxx file that need a file to run should be place aproprietly
4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
8 # add test that does not require data:
9 # They usally return if no argument is given
21 TestDicomDirElement.cxx
26 SET(TEST_SOURCES ${TEST_SOURCES}
31 # add tests that require data
33 SET(TEST_SOURCES ${TEST_SOURCES}
36 TestLoadAllDocumentsNoPrivNoSeq.cxx # includes generated gdcmDataImages.h
37 TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
38 #TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
39 TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
40 TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
41 #TestCopyDicom.cxx # includes generated gdcmDataImages.h
42 # TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
46 TestDicomDir.cxx # require DICOMDIR
47 TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
48 TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
49 TestSerieHelper.cxx # uses gdcmData as a default root directory
52 # add test that require VTK:
54 IF("${VTK_MAJOR_VERSION}" LESS 4)
55 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !")
56 ELSE("${VTK_MAJOR_VERSION}" LESS 4)
57 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
58 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
59 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
60 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 2)
61 IF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
62 MESSAGE(FATAL_ERROR "This VTK version is not supported, you are on your own !"
63 "Although gdcm should compile fine. You just need to turn BUILD_TESTING:=OFF")
64 ENDIF("${VTK_MAJOR_VERSION}" EQUAL 4 AND "${VTK_MINOR_VERSION}" EQUAL 4 AND "${VTK_BUILD_VERSION}" LESS 3)
65 # Include the VTK library since we know this is going to work
66 INCLUDE(${VTK_USE_FILE})
69 ${GDCM_SOURCE_DIR}/vtk
71 SET(TEST_SOURCES ${TEST_SOURCES}
77 ENDIF("${VTK_MAJOR_VERSION}" LESS 4)
79 ENDIF (GDCM_DATA_ROOT)
85 ${GDCM_SOURCE_DIR}/src
89 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
90 ADD_EXECUTABLE(gdcmTests ${Tests})
92 TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
94 TARGET_LINK_LIBRARIES(gdcmTests gdcm)
97 SET (TestsToRun ${Tests})
98 REMOVE (TestsToRun gdcmTests.cxx)
100 # Loop over files and create executables
101 FOREACH(file ${TEST_SOURCES})
102 GET_FILENAME_COMPONENT(name ${file} NAME_WE)
103 ADD_TEST(${name} ${GDCM_TESTS} ${name})
104 ENDFOREACH(file ${TEST_SOURCES})
106 #-----------------------------------------------------------------------------
108 # We need to test the reading of all dicom images in the gdcmData directory
109 # First parse this directory and extract all images
111 FILE(GLOB GDCM_DATA_IMAGES_GLOB
112 "${GDCM_DATA_ROOT}/*.acr"
113 "${GDCM_DATA_ROOT}/*.dcm"
114 "${GDCM_DATA_ROOT}/*.nema"
115 "${GDCM_DATA_ROOT}/*.ima"
118 # Black list of images known to break lots of readers (efilm, xmedcon ...):
120 # Multiframe Papyrus format image
121 # Just to remember this format exists, and is gdcm::File compliant
122 # (NOT gdcm::FileHelper ...)
123 # any contribution is welcome
124 "PET-cardio-Multiframe-Papyrus.dcm"
125 # From David Clunie's Compresion Dataset
126 "D_CLUNIE_CT1_JLSN.dcm"
127 "D_CLUNIE_CT1_JLSL.dcm"
128 #Not a Dicom Image, but a RT Object
129 "RS2.16.124.113534.2.3.5.0.120040728.21342.353.12747_anonimized.dcm"
131 "ETIAM_video_002.dcm"
132 #Something stupid occured in the code for LibIDO images.
133 #I Black list them for a while. JP
134 "gdcm-ACR-LibIDO.acr"
135 "LIBIDO-24-ACR_NEMA-Rectangle.dcm"
136 #16 Bits per pixel images with LUT 16 Bits.
137 #I wait to be 100% sure before releasing them. JP
140 # Jasper cannot handle this image, only kakadu so far, unless you patch jasper
141 # but then it breaks other images...
142 "CT_Phillips_JPEG2K_Decompr_Problem.dcm"
146 # I probabely messed up smething with the .png, .tst of
147 # the images I recently added to the Test Suite
148 # I Black list them, until I find where is the pb.
149 "US-RGB-8-esopecho.dcm"
150 "MR_Philips_Intera_No_PrivateSequenceImplicitVR.dcm"
151 "MR_Philips_Intera_PrivateSequenceImplicitVR.dcm"
152 "MR_SIEMENS_forceLoad29-1010_29-1020.dcm"
153 # An element contains a value of 4, but no data follows
154 # So, the next (group, elem) is not correctly read
155 "gdcm-MR-PHILIPS-16-Multi-Seq.dcm"
158 # Create a specific list of dicom files that we know are part of a sequence
160 "SIEMENS_MAGNETOM-12-MONO2-FileSeq[0-9].dcm"
163 # Add a special test that requires dciodvfy from dicom3tools
164 INCLUDE(${GDCM_SOURCE_DIR}/CMake/FindDicom3Tools.cmake)
166 # This is a GLOB expression, change it into a list separated with a comma and \n
167 SET(GDCM_DATA_IMAGES)
168 SET(GDCM_DATA_SEQ_IMAGES)
169 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
170 GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
172 ADD_TEST("DCIODVFY-INPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${filename}")
173 ADD_TEST("DCIODVFY-OUTPUT-${filename_temp}" "${DCIODVFY_EXECUTABLE}" "${GDCM_DATA_ROOT}/BaselineDicom/${filename_temp}")
174 ENDIF(DCIODVFY_FOUND)
175 STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
177 SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
178 # SEQ_LIST is a regular expression:
179 STRING(REGEX MATCH ${SEQ_LIST} is_seq ${filename_temp})
181 SET(GDCM_DATA_SEQ_IMAGES "${GDCM_DATA_SEQ_IMAGES}\n\"${filename_temp}\",")
186 # Populate GDCM_DATA_IMAGES:
187 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
188 "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
191 # Populate GDCM_DATA_SEQ_IMAGES:
192 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataSeqImages.h"
193 "const char * const gdcmDataSeqImages[] = { ${GDCM_DATA_SEQ_IMAGES}\n0 };\n"
196 #-----------------------------------------------------------------------------
197 # Trying to solve a bizarre problem when loading shared lib if gdcm is static
198 # Therefore I disable the test when building SHAREDLIBS
199 IF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)
200 ADD_LIBRARY(dynmodule MODULE dynmodule.cxx)
201 TARGET_LINK_LIBRARIES(dynmodule gdcm)
202 ADD_EXECUTABLE(loadmodule loadmodule.cxx )
203 TARGET_LINK_LIBRARIES(loadmodule gdcm -ldl)
204 ADD_TEST(loadmodule ${CXX_TEST_PATH}/loadmodule)
205 ENDIF(UNIX AND NOT GDCM_BUILD_SHARED_LIBS)