Testing/CMakeLists.txt

   1 # CMakeLists for Testing purpose
   2 # Cxx file that need a file to run should be place aproprietly
   3
   4 SET(CXX_TEST_PATH ${EXECUTABLE_OUTPUT_PATH})
   5
   6 SET(GDCM_TESTS ${CXX_TEST_PATH}/gdcmTests)
   7
   8 # add test that does not require data:
   9 # They usally return if no argument is given
  10 SET(TEST_SOURCES
  11   TestBug.cxx
  12   TestDcm2Acr.cxx
  13   TestHash.cxx
  14   TestWrite.cxx
  15   TestWriteRead.cxx
  16   TestWriteSimple.cxx
  17 )
  18
  19 # add tests that require data
  20 IF (GDCM_DATA_ROOT)
  21   SET(TEST_SOURCES ${TEST_SOURCES}
  22     #PrintHeader.cxx       #require test.acr
  23     PrintAllDocument.cxx     #require test.acr
  24     PrintDicomDir.cxx
  25     TestFindTags.cxx
  26     TestChangeHeader.cxx
  27     TestDicomDir.cxx      #require DICOMDIR
  28     BuildUpDicomDir.cxx
  29     TestReadWrite.cxx
  30     makeDicomDir.cxx
  31   )
  32   # add test that require VTK:
  33   IF(GDCM_VTK)
  34     INCLUDE_DIRECTORIES(
  35       ${GDCM_SOURCE_DIR}/vtk/
  36       )
  37     SET(TEST_SOURCES ${TEST_SOURCES}
  38       ShowDicom.cxx
  39       )
  40   ENDIF(GDCM_VTK)
  41 ENDIF (GDCM_DATA_ROOT)
  42
  43
  44
  45 # include stuff
  46 INCLUDE_DIRECTORIES(
  47   ${GDCM_SOURCE_DIR}/src/
  48   ${GDCM_BINARY_DIR}/
  49 )
  50
  51 CREATE_TEST_SOURCELIST(Tests gdcmTests.cxx ${TEST_SOURCES})
  52 ADD_EXECUTABLE(gdcmTests ${Tests})
  53 IF(GDCM_VTK)
  54   TARGET_LINK_LIBRARIES(gdcmTests vtkgdcm vtkRendering)
  55 ELSE(GDCM_VTK)
  56   TARGET_LINK_LIBRARIES(gdcmTests gdcm)
  57 ENDIF(GDCM_VTK)
  58
  59 SET (TestsToRun ${Tests})
  60 REMOVE (TestsToRun gdcmTests.cxx)
  61
  62 # Loop over files and create executables
  63 FOREACH(file ${TEST_SOURCES})
  64   GET_FILENAME_COMPONENT(name ${file} NAME_WE)
  65 #  IF (GDCM_DATA_ROOT)
  66 #    ADD_TEST(${name} ${GDCM_TESTS} ${name}
  67 #        -D ${GDCM_DATA_ROOT}
  68 #        -T ${GDCM_BINARY_DIR}/Testing/Temporary
  69 #        -V Baseline/gdcm/${name}.png)
  70 #  ELSE (GDCM_DATA_ROOT)
  71     ADD_TEST(${name} ${GDCM_TESTS} ${name})
  72 #  ENDIF (GDCM_DATA_ROOT)
  73 ENDFOREACH(file ${TEST_SOURCES})
  74
  75 #-----------------------------------------------------------------------------
  76
  77 # We need to test the reading of all dicom images in the gdcmData directory
  78 # First parse this directory and extract all images
  79
  80 IF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  81   FILE(GLOB GDCM_DATA_IMAGES_GLOB
  82     "${GDCM_DATA_ROOT}/*.acr"
  83     "${GDCM_DATA_ROOT}/*.dcm"
  84 #    "${GDCM_DATA_ROOT}/*.nema"
  85     "${GDCM_DATA_ROOT}/*.ima"
  86     )
  87 ELSE(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
  88   # Since there is a bug in cmake 1.8.3, I'll have to do two separate globs
  89   FILE(GLOB GDCM_DATA_IMAGES_GLOB_ACR
  90     "${GDCM_DATA_ROOT}/*.acr"
  91     )
  92   FILE(GLOB GDCM_DATA_IMAGES_GLOB_DCM
  93     "${GDCM_DATA_ROOT}/*.dcm"
  94     )
  95   FILE(GLOB GDCM_DATA_IMAGES_GLOB_NEMA
  96 #    "${GDCM_DATA_ROOT}/*.nema"
  97     )
  98   FILE(GLOB GDCM_DATA_IMAGES_GLOB_IMA
  99     "${GDCM_DATA_ROOT}/*.ima"
 100     )
 101   SET(GDCM_DATA_IMAGES_GLOB
 102     ${GDCM_DATA_IMAGES_GLOB_DCM} ${GDCM_DATA_IMAGES_GLOB_ACR}
 103     ${GDCM_DATA_IMAGES_GLOB_NEMA} ${GDCM_DATA_IMAGES_GLOB_IMA})
 104   #SET(GDCM_DATA_IMAGES_GLOB  ${GDCM_DATA_IMAGES_GLOB_ACR})
 105 ENDIF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9)
 106
 107 # Black list of images known to break lots of readers (efilm, xmedcon ...):
 108 SET(BLACK_LIST
 109   "gdcm-JPEG-LossLessThoravision.dcm" # serial killer
 110   "cr172241.dcm"           #temporarily remove as it kills my gnome session (but not kde)
 111   "emptyImage.dcm"         #the png looks ugly...
 112   "gdcm-MR-PHILIPS-16-Multi-Seq.fixed.dcm" #weird looks exactly the same as gdcm-MR-PHILIPS-16-Multi-Seq.dcm
 113   "gdcm-MR-PHILIPS-16.dcm" #png looks ugly
 114   "irmPhlipsNew1.dcm"      #png looks ugly
 115   "mriThruVPRO.dcm"        #png looks ugly
 116   "US.3405.1.dcm"          #looks exactly the same as US.1.2.dcm
 117   "8BitsRunLengthColor.dcm" # Write broken
 118   )
 119
 120 #   gdcm-ACR-LibIDO seems to be cut
 121 #   test.acr is very bright
 122
 123 # This is a GLOB expression, change it into a list separated with a comma and \n
 124 SET(GDCM_DATA_IMAGES)
 125 FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
 126   GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
 127   STRING(REGEX MATCH ${filename_temp} bad_dicom ${BLACK_LIST})
 128   IF(NOT bad_dicom)
 129     SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename_temp}\",")
 130   ENDIF(NOT bad_dicom)
 131 ENDFOREACH(filename)
 132
 133 # Populate GDCM_DATA_IMAGES:
 134 FILE(WRITE "${GDCM_BINARY_DIR}/gdcmDataImages.h"
 135   "const char * const gdcmDataImages[] = { ${GDCM_DATA_IMAGES}\n0 };\n"
 136   )