bbtk/src/bbmaracasvisuContourToControlPoints.h

   1 /*# ---------------------------------------------------------------------
   2 #
   3 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
   4 #                        pour la Sant�)
   5 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
   6 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
   7 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
   8 #
   9 #  This software is governed by the CeCILL-B license under French law and
  10 #  abiding by the rules of distribution of free software. You can  use,
  11 #  modify and/ or redistribute the software under the terms of the CeCILL-B
  12 #  license as circulated by CEA, CNRS and INRIA at the following URL
  13 #  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
  14 #  or in the file LICENSE.txt.
  15 #
  16 #  As a counterpart to the access to the source code and  rights to copy,
  17 #  modify and redistribute granted by the license, users are provided only
  18 #  with a limited warranty  and the software's author,  the holder of the
  19 #  economic rights,  and the successive licensors  have only  limited
  20 #  liability.
  21 #
  22 #  The fact that you are presently reading this means that you have had
  23 #  knowledge of the CeCILL-B license and that you accept its terms.
  24 # ------------------------------------------------------------------------ */
  25
  26 #ifndef __bbcreaMaracasVisuContourToControlPoints_h_INCLUDED__
  27 #define __bbcreaMaracasVisuContourToControlPoints_h_INCLUDED__
  28 #include "bbtkAtomicBlackBox.h"
  29 #include "iostream"
  30
  31 #include "Contour/ExtractControlPoints2D.h"
  32 #include "Contour/ContourPropagation.h"
  33 #include "Contour/Propagation.h"
  34
  35 #include "vtkImageData.h"
  36
  37 namespace bbcreaMaracasVisu
  38 {
  39
  40 class /*BBTK_EXPORT*/ ContourToControlPoints
  41  :
  42    public bbtk::AtomicBlackBox
  43 {
  44         //BBTK_USER_BLACK_BOX_INTERFACE(ContourToControlPoints,bbtk::AtomicBlackBox);
  45         BBTK_BLACK_BOX_INTERFACE(ContourToControlPoints,bbtk::AtomicBlackBox);
  46   BBTK_DECLARE_INPUT(In,double);
  47                 BBTK_DECLARE_INPUT(Sampling, double);
  48                 BBTK_DECLARE_INPUT(Slice,int);
  49                 BBTK_DECLARE_INPUT(InContourX, std::vector<double>*);
  50                 BBTK_DECLARE_INPUT(InContourY, std::vector<double>*);
  51                 BBTK_DECLARE_INPUT(InContourZ, std::vector<double>*);
  52                 BBTK_DECLARE_INPUT(RadRBF, double);
  53                 BBTK_DECLARE_INPUT(Option, int);
  54                 BBTK_DECLARE_INPUT(LoadContour, int);
  55   BBTK_DECLARE_OUTPUT(Out,double);
  56                 BBTK_DECLARE_OUTPUT(ControlPointX, std::vector<double>*);
  57                 BBTK_DECLARE_OUTPUT(ControlPointY, std::vector<double>*);
  58                 BBTK_DECLARE_OUTPUT(ControlPointZ, std::vector<double>*);
  59                 BBTK_DECLARE_OUTPUT(ImagePropg, vtkImageData*);
  60
  61   BBTK_PROCESS(Process);
  62   void Process();
  63   private:
  64                         int pos;
  65                         bool inic;
  66
  67                         ContourPropagation              *_contprop;
  68                         PropContour                             *_propgdata;
  69                         ExtractControlPoints2D  *_ext2D;
  70
  71                         vtkImageData                    *_imagedata;
  72                         FILE                                    *_fd;
  73
  74                         std::vector<double> OutContourX;
  75                         std::vector<double> OutContourY;
  76                         std::vector<double> OutContourZ;
  77
  78                         std::vector<double> KeyContourX;
  79                         std::vector<double> KeyContourY;
  80                         std::vector<double> KeyContourZ;
  81                         std::vector<int> KeySizes;
  82
  83                         //TEMP DATA
  84                         std::vector<double> tempX;
  85                         std::vector<double> tempY;
  86                         std::vector<double> tempZ;
  87                         std::vector<int>::iterator it;
  88
  89 };
  90
  91 BBTK_BEGIN_DESCRIBE_BLACK_BOX(ContourToControlPoints,bbtk::AtomicBlackBox);
  92 BBTK_NAME("ContourToControlPoints");
  93 BBTK_AUTHOR("Juan Sebasltian Torres");
  94 BBTK_DESCRIPTION("Generates the control points of a contour");
  95 BBTK_CATEGORY("filter");
  96    BBTK_INPUT(ContourToControlPoints,Sampling,"Sampling (in %) to obtain the control points",double,"");
  97    BBTK_INPUT(ContourToControlPoints,Slice,"Slice Number Propagation",int,"");
  98    BBTK_INPUT(ContourToControlPoints,InContourX,"Coordinate X of a Contour",std::vector<double>*,"");
  99    BBTK_INPUT(ContourToControlPoints,InContourY,"Coordinate Y of a Contour",std::vector<double>*,"");
 100    BBTK_INPUT(ContourToControlPoints,InContourZ,"Coordinate Z of a Contour",std::vector<double>*,"");
 101    BBTK_INPUT(ContourToControlPoints,RadRBF,"Radius of th RBF method",double,"");
 102    BBTK_INPUT(ContourToControlPoints,Option,"1 -> Control Points || 2 -> Propagation",int,"");
 103    BBTK_INPUT(ContourToControlPoints,LoadContour,"1 -> Load Saved Manual Points",int,"");
 104 //THE OUTPUTS
 105    BBTK_OUTPUT(ContourToControlPoints,ControlPointX,"Processed Coordinate X of the Boundary",std::vector<double>*,"");
 106    BBTK_OUTPUT(ContourToControlPoints,ControlPointY,"Processed Coordinate Y of the Boundary",std::vector<double>*,"");
 107    BBTK_OUTPUT(ContourToControlPoints,ControlPointZ,"Processed Coordinate Z of the Boundary",std::vector<double>*,"");
 108    BBTK_OUTPUT(ContourToControlPoints,ImagePropg,"vtkImageData of the propagation image-3D",vtkImageData*,"");
 109 BBTK_END_DESCRIBE_BLACK_BOX(ContourToControlPoints);
 110 }
 111 // EO namespace bbcreaMaracasVisu
 112
 113 #endif // __bbcreaMaracasVisuContourToControlPoints_h_INCLUDED__
 114