bin/odin.sh

   1 #!/bin/sh -l
   2
   3 function unziptar {
   4         zipname=`echo $1 | grep '\.zip'`
   5         echo $zipname
   6         tarname=`echo $1 | grep '\.tar'`
   7         echo $tarname
   8         tgzname=`echo $1 | grep '\.tgz'`
   9         echo $tgzname
  10         if [ "x$zipname" != "x" ]
  11                 then
  12                 echo "ZIP File"
  13                 unzip -j $1 -d data
  14         else
  15                 if [ "x$tarname" != "x" ]
  16                         then
  17                         echo "TAR File"
  18                         COMP=`tar -tvf $1 | awk 'END{print}' |   awk -F' ' '{print $NF}' | awk -F'/' '{print NF-1}'`
  19                         tar -xvf $1 --strip-components=${COMP} -C data
  20                 else
  21                         if [ "x$tgzname" != "x" ]
  22                                 then
  23                                 echo "TGZ File"
  24                                 COMP=`tar -tvf $1 | awk 'END{print}' |   awk -F' ' '{print $NF}' | awk -F'/' '{print NF-1}'`
  25                                 tar -zxvf $1 --strip-components=${COMP} -C data
  26                         else
  27                                 echo "Unknown File Type"
  28                                 exit 6
  29                         fi
  30                 fi
  31         fi
  32
  33         if [ $? != 0 ]
  34                 then
  35                 echo "A problem occurred while untargzing the input: giving up!"
  36                 exit 2
  37         fi
  38 }
  39
  40 function checkdir {
  41         lfc-ls $1 > /dev/null
  42         if [ $? != 0 ]
  43         then
  44                 echo "Directory $1 not found, creating it!"
  45                 lfc-mkdir -p $1
  46                 #exit 6
  47         fi
  48 }
  49
  50
  51 function downloadDir {
  52         checkdir $1
  53         LOCALDIR=`basename $1`
  54         mkdir -p ${LOCALDIR}
  55         for i in `lfc-ls $1 | grep -v garbage`
  56         do
  57                 lcg-cp -v lfn:$1/$i file:$PWD/${LOCALDIR}/$i
  58                 if [ $? != 0 ]
  59                 then
  60                         echo "lcg-cp failed: trying once more"
  61                         lcg-cp -v lfn:$1/$i file:$PWD/${LOCALDIR}/$i
  62                         if [ $? != 0 ]
  63                         then
  64                                 echo "Unable to download file lfn:$1/$i: giving up."
  65                                 exit 1
  66                         fi
  67                 fi
  68         done
  69 }
  70
  71 PROPATH=$1
  72 SMPPATH=$2
  73 RESDIR=$3
  74 ODINSEQ=$4
  75 OPTIONS=$5
  76
  77 if [ "${OPTIONS}" != "no" ]
  78 then
  79         OPT=`echo ${OPTIONS} | sed s/_/\ /g`
  80 else
  81         OPT=""
  82 fi
  83
  84 echo "Options are $OPT"
  85
  86
  87 PRO=`basename $PROPATH`
  88 SMP=`basename $SMPPATH`
  89
  90 SELMODE=`/usr/sbin/getenforce`
  91 if [ "${SELMODE}" != "Disabled" ] && [ "${SELMODE}" != "Permissive" ]
  92 then
  93         chcon -t textrel_shlib_t v*/bin/*/*.so
  94         chcon -t textrel_shlib_t v*/bin/*/*.so*
  95 fi
  96
  97
  98 #export LFC_HOST=lfc-biomed.in2p3.fr
  99 #export LCG_GFAL_INFOSYS=cclcgtopbdii02.in2p3.fr:2170
 100
 101 #echo "whoami, Printing env"
 102 #whoami
 103 #env
 104
 105 tar -zxvf odin-release.tgz
 106 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:.
 107 OUTNAME=`echo ${SMP%.smp}`
 108
 109 #launching program odinfispexe
 110 echo "executing ${ODINSEQ} simulate -magsi  -s $SMP  -p $PRO"
 111 ./${ODINSEQ} simulate -magsi  -s $SMP  -p $PRO
 112
 113 CODE=$?
 114 if [ ${CODE} != 0 ]
 115 then
 116     echo "Execution failed: exiting with code ${CODE}"
 117     #exit ${CODE}
 118 else
 119     echo "Done"
 120 fi
 121
 122 #launching program odinrecopexe
 123 echo "executing odinrecopexe $OPT -o $OUTNAME"
 124 ./odinrecoexe $OPT -o $OUTNAME
 125
 126 CODE=$?
 127 if [ ${CODE} != 0 ]
 128 then
 129     echo "Execution failed: exiting with code ${CODE}"
 130     #exit ${CODE}
 131 else
 132     echo "Done"
 133 fi
 134
 135 JDX="${OUTNAME}.jdx"
 136 test -f ${JDX}
 137 CODE=$?
 138 if [ ${CODE} != 0 ]
 139 then
 140         echo "No JDX produced, exit 6"
 141         exit 6
 142 else
 143         LFN=${RESDIR}/$JDX
 144         echo "Uploading $JDX to lfn:${LFN}"
 145         lfc-ls ${LFN}
 146         if [ $? = 0 ]
 147         then
 148                 lcg-del -a lfn:/${LFN}
 149                         if [ $? != 0 ]
 150                         then
 151                                 echo "not able to lcg-del lfn:/${LFN}, renaming it"
 152                                 d=`date -d "" +%s`
 153                                 lfc-rename ${LFN} ${LFN}-garbage-${d}
 154                         fi
 155         fi
 156 fi
 157 lcg-cr -v -d ccsrm02.in2p3.fr -l lfn:${LFN} file:$PWD/$JDX
 158 CODE=$?
 159 if [ ${CODE} != 0 ]
 160 then
 161     echo "JDX upload failed"
 162     exit 6
 163 fi
 164
 165