gdcmPython/demo/vtkGdcmWriter.py.in

   1 import sys
   2 import os.path
   3 from gdcmConfigDemo import *
   4 from gdcmPython.vtk import *
   5 from vtkpython import *
   6
   7 def PrintUse():
   8    print ""
   9    print "Use :"
  10    print "-----"
  11    print "%s <fileName>" % sys.argv[0]
  12    print "   fileName : path to the DICOM file to see"
  13    print ""
  14    print ""
  15
  16 # Get the file names
  17 try:
  18    fileName = sys.argv[1]
  19 except IndexError:
  20    fileName = os.path.join(GDCM_DATA_ROOT, "test.acr")
  21    if( not os.path.isfile(fileName) ):
  22       fileName=os.path.join(os.path.split(sys.argv[0])[0],"test.acr")
  23
  24 if( not os.path.isfile(fileName) ):
  25    PrintUse()
  26    sys.exit(1)
  27
  28 # read the image
  29 reader = vtkGdcmReader()
  30 reader.SetFileName(fileName)
  31 reader.Update()
  32
  33 # write the image
  34 writer = vtkGdcmWriter()
  35 writer.SetInput(reader.GetOutput())
  36 writer.SetFileName("outputPy.dcm")
  37 writer.Write()
  38
  39 # re-read the image
  40 reader2 = vtkGdcmReader()
  41 reader2.SetFileName("outputPy.dcm")
  42 reader2.Update()
  43
  44 # show the image
  45 viewer = vtkImageViewer()
  46 viewer.SetInput(reader2.GetOutput())
  47 rng = reader.GetOutput().GetScalarRange()
  48 viewer.SetColorWindow(rng[1] - rng[0])
  49 viewer.SetColorLevel(0.5 * (rng[1] + rng[0]))
  50
  51 dim = reader.GetOutput().GetDimensions()
  52 viewer.SetSize(dim[0],dim[1])
  53 if(dim[2] != 1):
  54    # For multifame dicom, take a snapshot of the center slice (+/- 1)
  55    viewer.SetZSlice(dim[2] / 2)
  56 else:
  57    viewer.SetZSlice(0)
  58 viewer.Render()
  59
  60 # sys.stdin.read(1)
  61