1 /*# ---------------------------------------------------------------------
3 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
5 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
6 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
7 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
9 # This software is governed by the CeCILL-B license under French law and
10 # abiding by the rules of distribution of free software. You can use,
11 # modify and/ or redistribute the software under the terms of the CeCILL-B
12 # license as circulated by CEA, CNRS and INRIA at the following URL
13 # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
14 # or in the file LICENSE.txt.
16 # As a counterpart to the access to the source code and rights to copy,
17 # modify and redistribute granted by the license, users are provided only
18 # with a limited warranty and the software's author, the holder of the
19 # economic rights, and the successive licensors have only limited
22 # The fact that you are presently reading this means that you have had
23 # knowledge of the CeCILL-B license and that you accept its terms.
24 # ------------------------------------------------------------------------ */
26 #include "FillFilter.h"
27 #include "creaVtk_MACROS.h"
33 FillFilter::FillFilter()
38 _limitRecursionFill = 50000;
46 //---------------------------------------------------------------------------
47 FillFilter::~FillFilter()
49 if (_auxImageFill != NULL)
51 _auxImageFill->Delete();
55 //---------------------------------------------------------------------------
56 void FillFilter::SetImages(vtkImageData *image,vtkImageData *image2) // virtual
58 baseFilterManualPaint::SetImages(image,image2);
59 if ((_maxX!=_maxXback) || (_maxY!=_maxYback) || (_maxZ!=_maxZback))
61 if (_auxImageFill != NULL)
63 _auxImageFill->Delete();
65 _auxImageFill = vtkImageData::New();
66 _auxImageFill->SetDimensions(_maxX + 1, _maxY + 1, _maxZ + 1);
67 _auxImageFill->SetOrigin(0, 0, 0);
68 _auxImageFill->SetExtent(0, _maxX, 0, _maxY, 0, _maxZ);
69 //EED 2017-01-01 Migration VTK7
70 #if VTK_MAJOR_VERSION <= 5
71 _auxImageFill->SetWholeExtent(0, _maxX, 0, _maxY, 0, _maxZ);
72 _auxImageFill->SetScalarTypeToUnsignedChar();
73 _auxImageFill->AllocateScalars();
75 _auxImageFill->AllocateScalars(VTK_UNSIGNED_CHAR,1);
78 unsigned char * ptrAuxImageFill = (unsigned char *)_auxImageFill->GetScalarPointer();
79 memset(ptrAuxImageFill, 0, (_maxX+1) * (_maxY+1) * (_maxZ+1) );
89 //---------------------------------------------------------------------------
90 void FillFilter::Run() // virtual
93 if ((_px >= _minX) && (_px <= _maxX) && (_py >= _minY) && (_py <= _maxY)
94 && (_pz >= _minZ) && (_pz <= _maxZ))
96 _graylevelbasefill = _image->GetScalarComponentAsDouble(_px, _py, _pz,0);
97 _distbasefill = _distancefill * _distancefill;
102 _countRecursiveFill = 0;
103 _countRecursiveFillProblem = 0;
104 _countProgressingFill = 0;
105 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
108 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
111 // _usingAuxImageFill = false;
112 ivi = _px + _py*(_maxX+1) + _pz*(_maxX+1)*(_maxY+1); // index vector image
113 FillToolLoop(_px, _py, _pz, ivi);
114 } //if _minX _maxX _minY _maxY _minZ _maxZ
117 //---------------------------------------------------------------------------
118 void FillFilter::FillToolLoop(int px, int py, int pz,long int iviA)
120 double difX,difY,difZ,_tmpDistfill;
121 std::vector<int> lstX;
122 std::vector<int> lstY;
123 std::vector<int> lstZ;
124 std::vector<long long int> lstivi;
128 lstivi.push_back( iviA );
130 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
133 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
136 DEF_POINTER_IMAGE_VTK_CREA(v_auxImageFill,ss_auxImageFill,p_auxImageFill,st_auxImageFill,_auxImageFill)
137 while ( lstX.size()!=0 )
139 // if point inside image
140 if ((lstX[0] >= _minX) && (lstX[0] <= _maxX) && (lstY[0] >= _minY) && (lstY[0] <= _maxY) && (lstZ[0] >= _minZ) && (lstZ[0] <= _maxZ))
145 _tmpDistfill = difX*difX + difY*difY + difZ*difZ;
146 // if distance of center point
147 if (_tmpDistfill<=_distbasefill)
149 // if point not visited
150 GETVALUE2_VTK_CREA(v_auxImageFill,p_auxImageFill,st_auxImageFill,lstivi[0] );
151 if (v_auxImageFill==0)
153 // If Gray Level valid
156 // _tmpiglfill = _image->GetScalarComponentAsDouble(px, py, pz, 0);
157 GETVALUE2_VTK_CREA(_tmpiglfill,p_image,st_image,lstivi[0])
162 // _tmpiglfill2 = _image2->GetScalarComponentAsDouble(px, py, pz, 0);
163 GETVALUE2_VTK_CREA(_tmpiglfill2,p_image2,st_image2,lstivi[0])
165 _tmpiglfill2 = _tmpiglfill;
168 float grayLBFMTOL = _graylevelbasefill - _tolerancefill;
169 float grayLBFPTOL = _graylevelbasefill + _tolerancefill;
170 bool isInRange = false;
172 if (_RangeMin <= grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
175 else if (_RangeMin > grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
176 grayLBFMTOL = _RangeMin;
179 else if (_RangeMin <= grayLBFMTOL && _RangeMax < grayLBFPTOL) {
180 grayLBFPTOL = _RangeMax;
183 else if ((_RangeMin <= _graylevelbasefill) && (_graylevelbasefill <= _RangeMax)) {
184 grayLBFMTOL = _RangeMin;
185 grayLBFPTOL = _RangeMax;
191 _auxGrayLevelValidationFill = (_tmpiglfill != _graylevel)
192 && (_tmpiglfill2 != _graylevel)
193 && (_tmpiglfill >= grayLBFMTOL)
194 && (_tmpiglfill <= grayLBFPTOL)
195 && (_tmpDistfill <= _distbasefill); //DFCH
197 _auxGrayLevelValidationFill = false;
200 if (_auxGrayLevelValidationFill)
205 // _image2->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
206 SETVALUE2_VTK_CREA(_graylevel,p_image2,st_image2,lstivi[0])
208 // _image->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
209 SETVALUE2_VTK_CREA(_graylevel,p_image,st_image,lstivi[0])
212 // Add neighborhood points in the list
215 if (_direction == 0) // YZ
217 //lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
218 //lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
219 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
220 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
221 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
222 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
224 if (_direction == 1) // XZ
226 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
227 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
228 // lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
229 // lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
230 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
231 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
233 if (_direction == 2) // XY
235 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
236 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
237 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
238 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
239 //lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
240 //lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
243 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
244 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
245 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
246 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
247 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
248 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
257 } // if gray level valid _auxGrayLevelValidationFill
259 } // if point not visited
260 // Add point to already visited
261 SETVALUE2_VTK_CREA(1,p_auxImageFill,st_auxImageFill,lstivi[0]);
262 } // if distance of center point
263 } // if point inside image
264 // Remove point from the list
265 lstX.erase( lstX.begin() );
266 lstY.erase( lstY.begin() );
267 lstZ.erase( lstZ.begin() );
268 lstivi.erase( lstivi.begin() );
269 } // while _lstX.size
276 //---------------------------------------------------------------------------
277 void FillFilter::Run2() // virtual
281 if ((_px >= _minX) && (_px <= _maxX) && (_py >= _minY) && (_py <= _maxY)
282 && (_pz >= _minZ) && (_pz <= _maxZ))
284 _graylevelbasefill = _image->GetScalarComponentAsDouble(_px, _py, _pz,0);
288 _distbasefill = _distancefill * _distancefill;
289 _countRecursiveFill = 0;
290 _countRecursiveFillProblem = 0;
291 _countProgressingFill = 0;
292 _usingAuxImageFill = false;
294 ivi = _px + _py*(_maxX+1) + _pz*(_maxX+1)*(_maxY+1); // index vector image
296 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
299 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
303 // FillToolRecursive(_px, _py, _pz);
304 FillToolRecursive(_px, _py, _pz, ivi);
305 unsigned char *pImage;
306 pImage = (unsigned char *) _auxImageFill->GetScalarPointer();
310 while (_countRecursiveFillProblem != 0)
312 _countRecursiveFillProblem = 0;
313 _usingAuxImageFill = true;
314 for (kk = 0; kk <= _maxZ; kk++)
316 for (jj = 0; jj <= _maxY; jj++)
318 for (ii = 0; ii <= _maxX; ii++)
320 if (pImage[ivi] == 1)
323 // FillToolRecursive(ii, jj, kk);
324 FillToolRecursive(ii, jj, kk, ivi);
332 } //if _minX _maxX _minY _maxY _minZ _maxZ
337 //---------------------------------------------------------------------------
338 void FillFilter::FillToolRecursive(int px, int py, int pz,long int ivi)
340 //ups ??EED DEF_POINTER_IMAGE_VTK_CREA(v_image,ss_image,p_image,st_image,_image)
341 //ups ??EED DEF_POINTER_IMAGE_VTK_CREA(v_image2,ss_image2,p_image2,st_image2,_image2)
343 _countRecursiveFill++;
344 _countProgressingFill++;
345 if (_countProgressingFill > 200000)
347 printf("R %ld \n", _countRecursiveFill);
348 _countProgressingFill = 0;
351 if ((px >= _minX) && (px <= _maxX) && (py >= _minY) && (py <= _maxY)
352 && (pz >= _minZ) && (pz <= _maxZ))
354 if (_usingAuxImageFill == true)
356 //UPS ??EED this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
358 // _auxImageFill->SetScalarComponentFromFloat(px, py, pz, 0, 0);
359 _ptrAuxImageFill[ ivi ]=0;
364 _tmpDistfill = difX*difX + difY*difY + difZ*difZ;
365 // _tmpDistfill = (px-_pxfill)*(px-_pxfill)
366 // + (py-_pyfill)*(py-_pyfill)
367 // + (pz-_pzfill)*(pz-_pzfill);
369 //if (_countRecursiveFill >1 )
371 // printf(" -> %d %d %d cr=%ld r=%f\n", px,py,pz,_countRecursiveFill , _tmpDistfill);
376 // _tmpiglfill = _image->GetScalarComponentAsDouble(px, py, pz, 0);
377 GETVALUE2_VTK_CREA(_tmpiglfill,p_image,st_image,ivi)
382 // _tmpiglfill2 = _image2->GetScalarComponentAsDouble(px, py, pz, 0);
383 GETVALUE2_VTK_CREA(_tmpiglfill2,p_image2,st_image2,ivi)
385 _tmpiglfill2 = _tmpiglfill;
388 float grayLBFMTOL = _graylevelbasefill - _tolerancefill;
389 float grayLBFPTOL = _graylevelbasefill + _tolerancefill;
390 bool isInRange = false;
392 if (_RangeMin <= grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
395 else if (_RangeMin > grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
396 grayLBFMTOL = _RangeMin;
399 else if (_RangeMin <= grayLBFMTOL && _RangeMax < grayLBFPTOL) {
400 grayLBFPTOL = _RangeMax;
403 else if ((_RangeMin <= _graylevelbasefill) && (_graylevelbasefill <= _RangeMax)) {
404 grayLBFMTOL = _RangeMin;
405 grayLBFPTOL = _RangeMax;
411 _auxGrayLevelValidationFill = (_tmpiglfill != _graylevel)
412 && (_tmpiglfill2 != _graylevel)
413 && (_tmpiglfill >= grayLBFMTOL)
414 && (_tmpiglfill <= grayLBFPTOL)
415 && (_tmpDistfill <= _distbasefill); //DFCH
417 _auxGrayLevelValidationFill = false;
421 if (_auxGrayLevelValidationFill == true)
423 //UPS ??EED this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
427 // _image2->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
428 SETVALUE2_VTK_CREA(_graylevel,p_image2,st_image2,ivi)
431 // _image->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
432 SETVALUE2_VTK_CREA(_graylevel,p_image,st_image,ivi)
435 if (_countRecursiveFill < _limitRecursionFill)
440 if (_direction == 0) // YZ
442 //FillToolRecursive(px+1,py,pz);
443 //FillToolRecursive(px-1,py,pz);
444 FillToolRecursive(px, py + 1, pz, ivi+_OneLine );
445 FillToolRecursive(px, py - 1, pz, ivi-_OneLine );
446 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
447 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
449 if (_direction == 1) // XZ
451 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn);
452 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn);
453 //FillToolRecursive(px,py+1,pz);
454 //FillToolRecursive(px,py-1,pz);
455 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
456 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
458 if (_direction == 2) // XY
460 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn);
461 FillToolRecursive(px, py + 1, pz, ivi+_OneLine);
462 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn);
463 FillToolRecursive(px, py - 1, pz, ivi-_OneLine);
464 //FillToolRecursive(px,py,pz-1);
465 //FillToolRecursive(px,py,pz+1);
468 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn );
469 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn );
470 FillToolRecursive(px, py + 1, pz, ivi+_OneLine );
471 FillToolRecursive(px, py - 1, pz, ivi-_OneLine );
472 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
473 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
476 } //_countRecursiveFill
479 if ((_auxGrayLevelValidationFill == true) && (_countRecursiveFill >= _limitRecursionFill))
481 _countRecursiveFillProblem++;
484 if (_direction == 0) // YZ
486 //SetAuxImageFill(px+1,py,pz);
487 //SetAuxImageFill(px-1,py,pz);
488 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
489 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
490 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
491 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
493 if (_direction == 1) // XZ
495 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
496 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
497 //SetAuxImageFill(px,py+1,pz);
498 //SetAuxImageFill(px,py-1,pz);
499 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
500 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
502 if (_direction == 2) // XY
504 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
505 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
506 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
507 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
508 //SetAuxImageFill(px,py,pz-1);
509 //SetAuxImageFill(px,py,pz+1);
512 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
513 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
514 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
515 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
516 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
517 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
520 } // _graylevel //_limitRecursionFill
522 } //if _minX _maxX _minY _maxY _minZ _maxZ
523 _countRecursiveFill--;
527 //---------------------------------------------------------------------------
528 void FillFilter::SetAuxImageFill(int px, int py, int pz, long int ivi)
530 if ((px >= _minX) && (px <= _maxX) && (py >= _minY) && (py <= _maxY)
531 && (pz >= _minZ) && (pz <= _maxZ))
533 this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
535 // _auxImageFill->SetScalarComponentFromFloat(px, py, pz, 0, 1);
536 _ptrAuxImageFill[ ivi ]=1;
542 //---------------------------------------------------------------------------
543 void FillFilter::SetToleranceFill(double tolerancefill)
545 _tolerancefill = tolerancefill;
548 //---------------------------------------------------------------------------
549 void FillFilter::SetDistanceFill(int distancefill)
551 _distancefill = distancefill;