1 /*# ---------------------------------------------------------------------
3 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
5 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
6 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
7 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
9 # This software is governed by the CeCILL-B license under French law and
10 # abiding by the rules of distribution of free software. You can use,
11 # modify and/ or redistribute the software under the terms of the CeCILL-B
12 # license as circulated by CEA, CNRS and INRIA at the following URL
13 # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
14 # or in the file LICENSE.txt.
16 # As a counterpart to the access to the source code and rights to copy,
17 # modify and redistribute granted by the license, users are provided only
18 # with a limited warranty and the software's author, the holder of the
19 # economic rights, and the successive licensors have only limited
22 # The fact that you are presently reading this means that you have had
23 # knowledge of the CeCILL-B license and that you accept its terms.
24 # ------------------------------------------------------------------------ */
26 #include "FillFilter.h"
27 #include "creaVtk_MACROS.h"
33 FillFilter::FillFilter()
38 _limitRecursionFill = 50000;
46 //---------------------------------------------------------------------------
47 FillFilter::~FillFilter()
49 if (_auxImageFill != NULL)
51 _auxImageFill->Delete();
55 //---------------------------------------------------------------------------
56 void FillFilter::SetImages(vtkImageData *image,vtkImageData *image2) // virtual
58 baseFilterManualPaint::SetImages(image,image2);
59 if ((_maxX!=_maxXback) || (_maxY!=_maxYback) || (_maxZ!=_maxZback))
61 if (_auxImageFill != NULL)
63 _auxImageFill->Delete();
65 _auxImageFill = vtkImageData::New();
66 _auxImageFill->SetDimensions(_maxX + 1, _maxY + 1, _maxZ + 1);
67 _auxImageFill->SetOrigin(0, 0, 0);
68 _auxImageFill->SetExtent(0, _maxX, 0, _maxY, 0, _maxZ);
69 //EED 2017-01-01 Migration VTK7
70 #if VTK_MAJOR_VERSION <= 5
71 _auxImageFill->SetWholeExtent(0, _maxX, 0, _maxY, 0, _maxZ);
72 _auxImageFill->SetScalarTypeToUnsignedChar();
73 _auxImageFill->AllocateScalars();
75 _auxImageFill->AllocateScalars(VTK_UNSIGNED_CHAR,1);
77 unsigned char * ptrAuxImageFill = (unsigned char *)_auxImageFill->GetScalarPointer();
78 memset(ptrAuxImageFill, 0, (_maxX+1) * (_maxY+1) * (_maxZ+1) );
89 //---------------------------------------------------------------------------
90 void FillFilter::Run() // virtual
93 if ((_px >= _minX) && (_px <= _maxX) && (_py >= _minY) && (_py <= _maxY)
94 && (_pz >= _minZ) && (_pz <= _maxZ))
96 _graylevelbasefill = _image->GetScalarComponentAsDouble(_px, _py, _pz,0);
97 _distbasefill = _distancefill * _distancefill;
102 _countRecursiveFill = 0;
103 _countRecursiveFillProblem = 0;
104 _countProgressingFill = 0;
105 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
108 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
112 // _usingAuxImageFill = false;
113 ivi = _px + _py*(_maxX+1) + _pz*(_maxX+1)*(_maxY+1); // index vector image
115 FillToolLoop(_px, _py, _pz, ivi);
116 } //if _minX _maxX _minY _maxY _minZ _maxZ
122 //---------------------------------------------------------------------------
123 void FillFilter::FillToolLoop(int px, int py, int pz,long int iviA)
125 double difX,difY,difZ,_tmpDistfill;
126 std::vector<int> lstX;
127 std::vector<int> lstY;
128 std::vector<int> lstZ;
129 std::vector<long long int> lstivi;
133 lstivi.push_back( iviA );
136 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
139 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
145 DEF_POINTER_IMAGE_VTK_CREA(v_auxImageFill,ss_auxImageFill,p_auxImageFill,st_auxImageFill,_auxImageFill)
146 while ( lstX.size()!=0 )
148 // if point inside image
149 if ((lstX[0] >= _minX) && (lstX[0] <= _maxX) && (lstY[0] >= _minY) && (lstY[0] <= _maxY) && (lstZ[0] >= _minZ) && (lstZ[0] <= _maxZ))
154 _tmpDistfill = difX*difX + difY*difY + difZ*difZ;
155 // if distance of center point
156 if (_tmpDistfill<=_distbasefill)
158 // if point not visited
159 GETVALUE2_VTK_CREA(v_auxImageFill,p_auxImageFill,st_auxImageFill,lstivi[0] );
160 if (v_auxImageFill==0)
162 // If Gray Level valid
165 // _tmpiglfill = _image->GetScalarComponentAsDouble(px, py, pz, 0);
166 GETVALUE2_VTK_CREA(_tmpiglfill,p_image,st_image,lstivi[0])
171 // _tmpiglfill2 = _image2->GetScalarComponentAsDouble(px, py, pz, 0);
172 GETVALUE2_VTK_CREA(_tmpiglfill2,p_image2,st_image2,lstivi[0])
174 _tmpiglfill2 = _tmpiglfill;
177 float grayLBFMTOL = _graylevelbasefill - _tolerancefill;
178 float grayLBFPTOL = _graylevelbasefill + _tolerancefill;
179 bool isInRange = false;
181 if (_RangeMin <= grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
184 else if (_RangeMin > grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
185 grayLBFMTOL = _RangeMin;
188 else if (_RangeMin <= grayLBFMTOL && _RangeMax < grayLBFPTOL) {
189 grayLBFPTOL = _RangeMax;
192 else if ((_RangeMin <= _graylevelbasefill) && (_graylevelbasefill <= _RangeMax)) {
193 grayLBFMTOL = _RangeMin;
194 grayLBFPTOL = _RangeMax;
200 _auxGrayLevelValidationFill = (_tmpiglfill != _graylevel)
201 && (_tmpiglfill2 != _graylevel)
202 && (_tmpiglfill >= grayLBFMTOL)
203 && (_tmpiglfill <= grayLBFPTOL)
204 && (_tmpDistfill <= _distbasefill); //DFCH
206 _auxGrayLevelValidationFill = false;
209 if (_auxGrayLevelValidationFill)
214 // _image2->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
215 SETVALUE2_VTK_CREA(_graylevel,p_image2,st_image2,lstivi[0])
217 // _image->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
218 SETVALUE2_VTK_CREA(_graylevel,p_image,st_image,lstivi[0])
221 // Add neighborhood points in the list
224 if (_direction == 0) // YZ
226 //lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
227 //lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
228 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
229 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
230 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
231 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
233 if (_direction == 1) // XZ
235 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
236 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
237 // lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
238 // lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
239 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
240 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
242 if (_direction == 2) // XY
244 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
245 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
246 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
247 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
248 //lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
249 //lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
252 lstX.push_back(lstX[0]+1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneColumn);
253 lstX.push_back(lstX[0]-1); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneColumn);
254 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]+1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]+_OneLine);
255 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0]-1); lstZ.push_back(lstZ[0] ); lstivi.push_back( lstivi[0]-_OneLine);
256 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]+1); lstivi.push_back( lstivi[0]+_OnePlane);
257 lstX.push_back(lstX[0] ); lstY.push_back(lstY[0] ); lstZ.push_back(lstZ[0]-1); lstivi.push_back( lstivi[0]-_OnePlane);
266 } // if gray level valid _auxGrayLevelValidationFill
268 } // if point not visited
269 // Add point to already visited
270 SETVALUE2_VTK_CREA(1,p_auxImageFill,st_auxImageFill,lstivi[0]);
271 } // if distance of center point
272 } // if point inside image
273 // Remove point from the list
274 lstX.erase( lstX.begin() );
275 lstY.erase( lstY.begin() );
276 lstZ.erase( lstZ.begin() );
277 lstivi.erase( lstivi.begin() );
278 } // while _lstX.size
285 //---------------------------------------------------------------------------
286 void FillFilter::Run2() // virtual
290 if ((_px >= _minX) && (_px <= _maxX) && (_py >= _minY) && (_py <= _maxY)
291 && (_pz >= _minZ) && (_pz <= _maxZ))
293 _graylevelbasefill = _image->GetScalarComponentAsDouble(_px, _py, _pz,0);
297 _distbasefill = _distancefill * _distancefill;
298 _countRecursiveFill = 0;
299 _countRecursiveFillProblem = 0;
300 _countProgressingFill = 0;
301 _usingAuxImageFill = false;
303 ivi = _px + _py*(_maxX+1) + _pz*(_maxX+1)*(_maxY+1); // index vector image
305 DEF_POINTER_IMAGE_VTK_CREA_set(v_image,ss_image,p_image,st_image,_image)
308 DEF_POINTER_IMAGE_VTK_CREA_set(v_image2,ss_image2,p_image2,st_image2,_image2)
312 // FillToolRecursive(_px, _py, _pz);
313 FillToolRecursive(_px, _py, _pz, ivi);
314 unsigned char *pImage;
315 pImage = (unsigned char *) _auxImageFill->GetScalarPointer();
319 while (_countRecursiveFillProblem != 0)
321 _countRecursiveFillProblem = 0;
322 _usingAuxImageFill = true;
323 for (kk = 0; kk <= _maxZ; kk++)
325 for (jj = 0; jj <= _maxY; jj++)
327 for (ii = 0; ii <= _maxX; ii++)
329 if (pImage[ivi] == 1)
332 // FillToolRecursive(ii, jj, kk);
333 FillToolRecursive(ii, jj, kk, ivi);
341 } //if _minX _maxX _minY _maxY _minZ _maxZ
346 //---------------------------------------------------------------------------
347 void FillFilter::FillToolRecursive(int px, int py, int pz,long int ivi)
349 //ups ??EED DEF_POINTER_IMAGE_VTK_CREA(v_image,ss_image,p_image,st_image,_image)
350 //ups ??EED DEF_POINTER_IMAGE_VTK_CREA(v_image2,ss_image2,p_image2,st_image2,_image2)
352 _countRecursiveFill++;
353 _countProgressingFill++;
354 if (_countProgressingFill > 200000)
356 printf("R %ld \n", _countRecursiveFill);
357 _countProgressingFill = 0;
360 if ((px >= _minX) && (px <= _maxX) && (py >= _minY) && (py <= _maxY)
361 && (pz >= _minZ) && (pz <= _maxZ))
363 if (_usingAuxImageFill == true)
365 //UPS ??EED this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
367 // _auxImageFill->SetScalarComponentFromFloat(px, py, pz, 0, 0);
368 _ptrAuxImageFill[ ivi ]=0;
373 _tmpDistfill = difX*difX + difY*difY + difZ*difZ;
374 // _tmpDistfill = (px-_pxfill)*(px-_pxfill)
375 // + (py-_pyfill)*(py-_pyfill)
376 // + (pz-_pzfill)*(pz-_pzfill);
378 //if (_countRecursiveFill >1 )
380 // printf(" -> %d %d %d cr=%ld r=%f\n", px,py,pz,_countRecursiveFill , _tmpDistfill);
385 // _tmpiglfill = _image->GetScalarComponentAsDouble(px, py, pz, 0);
386 GETVALUE2_VTK_CREA(_tmpiglfill,p_image,st_image,ivi)
391 // _tmpiglfill2 = _image2->GetScalarComponentAsDouble(px, py, pz, 0);
392 GETVALUE2_VTK_CREA(_tmpiglfill2,p_image2,st_image2,ivi)
394 _tmpiglfill2 = _tmpiglfill;
397 float grayLBFMTOL = _graylevelbasefill - _tolerancefill;
398 float grayLBFPTOL = _graylevelbasefill + _tolerancefill;
399 bool isInRange = false;
401 if (_RangeMin <= grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
404 else if (_RangeMin > grayLBFMTOL && _RangeMax >= grayLBFPTOL) {
405 grayLBFMTOL = _RangeMin;
408 else if (_RangeMin <= grayLBFMTOL && _RangeMax < grayLBFPTOL) {
409 grayLBFPTOL = _RangeMax;
412 else if ((_RangeMin <= _graylevelbasefill) && (_graylevelbasefill <= _RangeMax)) {
413 grayLBFMTOL = _RangeMin;
414 grayLBFPTOL = _RangeMax;
420 _auxGrayLevelValidationFill = (_tmpiglfill != _graylevel)
421 && (_tmpiglfill2 != _graylevel)
422 && (_tmpiglfill >= grayLBFMTOL)
423 && (_tmpiglfill <= grayLBFPTOL)
424 && (_tmpDistfill <= _distbasefill); //DFCH
426 _auxGrayLevelValidationFill = false;
430 if (_auxGrayLevelValidationFill == true)
432 //UPS ??EED this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
436 // _image2->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
437 SETVALUE2_VTK_CREA(_graylevel,p_image2,st_image2,ivi)
440 // _image->SetScalarComponentFromFloat(px, py, pz, 0,(float) _graylevel);
441 SETVALUE2_VTK_CREA(_graylevel,p_image,st_image,ivi)
444 if (_countRecursiveFill < _limitRecursionFill)
449 if (_direction == 0) // YZ
451 //FillToolRecursive(px+1,py,pz);
452 //FillToolRecursive(px-1,py,pz);
453 FillToolRecursive(px, py + 1, pz, ivi+_OneLine );
454 FillToolRecursive(px, py - 1, pz, ivi-_OneLine );
455 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
456 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
458 if (_direction == 1) // XZ
460 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn);
461 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn);
462 //FillToolRecursive(px,py+1,pz);
463 //FillToolRecursive(px,py-1,pz);
464 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
465 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
467 if (_direction == 2) // XY
469 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn);
470 FillToolRecursive(px, py + 1, pz, ivi+_OneLine);
471 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn);
472 FillToolRecursive(px, py - 1, pz, ivi-_OneLine);
473 //FillToolRecursive(px,py,pz-1);
474 //FillToolRecursive(px,py,pz+1);
477 FillToolRecursive(px + 1, py, pz, ivi+_OneColumn );
478 FillToolRecursive(px - 1, py, pz, ivi-_OneColumn );
479 FillToolRecursive(px, py + 1, pz, ivi+_OneLine );
480 FillToolRecursive(px, py - 1, pz, ivi-_OneLine );
481 FillToolRecursive(px, py, pz - 1, ivi-_OnePlane );
482 FillToolRecursive(px, py, pz + 1, ivi+_OnePlane );
485 } //_countRecursiveFill
488 if ((_auxGrayLevelValidationFill == true) && (_countRecursiveFill >= _limitRecursionFill))
490 _countRecursiveFillProblem++;
493 if (_direction == 0) // YZ
495 //SetAuxImageFill(px+1,py,pz);
496 //SetAuxImageFill(px-1,py,pz);
497 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
498 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
499 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
500 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
502 if (_direction == 1) // XZ
504 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
505 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
506 //SetAuxImageFill(px,py+1,pz);
507 //SetAuxImageFill(px,py-1,pz);
508 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
509 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
511 if (_direction == 2) // XY
513 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
514 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
515 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
516 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
517 //SetAuxImageFill(px,py,pz-1);
518 //SetAuxImageFill(px,py,pz+1);
521 SetAuxImageFill(px + 1, py, pz,ivi+_OneColumn);
522 SetAuxImageFill(px - 1, py, pz,ivi-_OneColumn);
523 SetAuxImageFill(px, py + 1, pz,ivi+_OneLine);
524 SetAuxImageFill(px, py - 1, pz,ivi-_OneLine);
525 SetAuxImageFill(px, py, pz - 1,ivi-_OnePlane);
526 SetAuxImageFill(px, py, pz + 1,ivi+_OnePlane);
529 } // _graylevel //_limitRecursionFill
531 } //if _minX _maxX _minY _maxY _minZ _maxZ
532 _countRecursiveFill--;
536 //---------------------------------------------------------------------------
537 void FillFilter::SetAuxImageFill(int px, int py, int pz, long int ivi)
539 if ((px >= _minX) && (px <= _maxX) && (py >= _minY) && (py <= _maxY)
540 && (pz >= _minZ) && (pz <= _maxZ))
542 this->_IMManager->AddModifiedPixel(px, py, pz); //DFCH
544 // _auxImageFill->SetScalarComponentFromFloat(px, py, pz, 0, 1);
545 _ptrAuxImageFill[ ivi ]=1;
551 //---------------------------------------------------------------------------
552 void FillFilter::SetToleranceFill(double tolerancefill)
554 _tolerancefill = tolerancefill;
557 //---------------------------------------------------------------------------
558 void FillFilter::SetDistanceFill(int distancefill)
560 _distancefill = distancefill;