1 /*=========================================================================
4 Module: $RCSfile: bbitkImageSeriesReader.cxx,v $
6 Date: $Date: 2008/04/18 12:59:50 $
7 Version: $Revision: 1.3 $
9 Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
10 l'Image). All rights reserved. See Doc/License.txt or
11 http://www.creatis.insa-lyon.fr/Public/bbtk/License.html for details.
13 This software is distributed WITHOUT ANY WARRANTY; without even
14 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 PURPOSE. See the above copyright notices for more information.
17 =========================================================================*/
24 #include "bbitkImageSeriesReader.h"
25 #include "bbitkPackage.h"
26 #include "itkImageSeriesReader.h"
30 BBTK_BLACK_BOX_IMPLEMENTATION(ImageSeriesReader,bbtk::AtomicBlackBox);
32 BBTK_ADD_BLACK_BOX_TO_PACKAGE(itk,ImageSeriesReader);
37 void ImageSeriesReader::Read()
39 const std::vector<std::string>& filenames = bbGetInputFileNames();
40 if (!filenames.size())
42 bbtkError("Void vector passed to "<<bbGetFullName());
45 std::string filename = filenames[0];
47 itk::ImageIOBase::Pointer genericReader =
48 itk::ImageIOFactory::CreateImageIO(filename.c_str(),
49 itk::ImageIOFactory::ReadMode);
52 bbtkError(bbGetFullName()<<" : File format unknown (while reading \"" << filename << "\")");
54 genericReader->SetFileName(filename.c_str());
55 genericReader->ReadImageInformation();
57 bbtk::TypeInfo typ = GetITKImagePtrTypeInfoFromPixelTypeInfoAndDimension(genericReader->GetComponentTypeInfo(), genericReader->GetNumberOfDimensions());
59 BBTK_TEMPLATE_ITK_IMAGE_SWITCH(typ,Read);
69 void ImageSeriesReader::Read()
71 bbtkDebugMessageInc("Core",9,"bbitk::ImageSeriesReader<"
73 <<">::Read()"<<std::endl);
77 typedef T itkImageType;
78 typedef itk::ImageSeriesReader< itkImageType > itkReaderType;
80 typename itkReaderType::Pointer reader = itkReaderType::New();
81 const std::vector<std::string>& filenames = bbGetInputFileNames();
82 reader->SetFileNames(filenames);
83 try { reader->Update(); }
84 catch( std::exception& e )
86 bbtkError("could not read image series : "<<e.what());
89 reader->GetOutput()->Register();
90 bbSetOutputOut ( reader->GetOutput() );
92 bbtkDebugDecTab("Core",9);