packages/itkvtk/src/bbitkvtkGeodesicMeshDeformation.h

   1 //=====
   2 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
   3 //=====
   4 #ifndef __bbitkvtkGeodesicMeshDeformation_h_INCLUDED__
   5 #define __bbitkvtkGeodesicMeshDeformation_h_INCLUDED__
   6
   7 #include "bbitkvtk_EXPORT.h"
   8 #include "bbtkAtomicBlackBox.h"
   9 #include "iostream"
  10
  11 #include "vtkPolyData.h"
  12 #include "itkQuadEdgeMesh.h"
  13 #include "itkFastMarchingThresholdStoppingCriterion.h"
  14 //#include "itkFastMarchingQuadEdgeMeshFilterBase.h"
  15 #include "itkFastMarchingQuadEdgeMeshFilterResultsBase.h"
  16
  17 namespace bbitkvtk
  18 {
  19
  20 class bbitkvtk_EXPORT GeodesicMeshDeformation
  21  :
  22    public bbtk::AtomicBlackBox
  23 {
  24   BBTK_BLACK_BOX_INTERFACE(GeodesicMeshDeformation,bbtk::AtomicBlackBox);
  25 //=====
  26 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
  27 //=====
  28   BBTK_DECLARE_INPUT(Active, bool);
  29   BBTK_DECLARE_INPUT(TypeIn, int);
  30   BBTK_DECLARE_INPUT(In,vtkPolyData*);
  31   BBTK_DECLARE_INPUT(EdgeId, long);
  32   BBTK_DECLARE_INPUT(S, double);
  33   BBTK_DECLARE_INPUT(Center, std::vector<double>);
  34   BBTK_DECLARE_INPUT(Direction, std::vector<double>);
  35   BBTK_DECLARE_OUTPUT(Out, std::vector<double>);
  36   BBTK_PROCESS(Process);
  37   void Process();
  38
  39   using MeshType = itk::QuadEdgeMesh<double, 3>;
  40
  41   //This is not the FastMarchingQuadEdge filter from ITK, this is a modified version to increase performance in our use
  42   using FastMarchingType = itk::FastMarchingQuadEdgeMeshFilterResultsBase<MeshType, MeshType>;
  43
  44         long                                                                    EdgeIdBack;
  45         std::vector<int>                                        voiIdPoints;
  46         std::vector<double>                                     backLstCenter;
  47         vtkPolyData                                                     *polydata;
  48         MeshType::Pointer                                               quadEdgeMesh;
  49         double                                                                  sCurrent;
  50         FastMarchingType::Pointer                               fmmFilter;
  51         bool                                                                    firstTime;
  52 //=====
  53 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
  54 //=====
  55 };
  56
  57 BBTK_BEGIN_DESCRIBE_BLACK_BOX(GeodesicMeshDeformation,bbtk::AtomicBlackBox);
  58 BBTK_NAME("GeodesicMeshDeformation");
  59 BBTK_AUTHOR("InfoDev");
  60 BBTK_DESCRIPTION("No Description.");
  61 BBTK_CATEGORY("empty");
  62 BBTK_INPUT(GeodesicMeshDeformation,Active,"(default true) true/false",bool,"");
  63 BBTK_INPUT(GeodesicMeshDeformation,TypeIn,"(default 0) 0:Direction  1:Center",int,"");
  64 BBTK_INPUT(GeodesicMeshDeformation,In,"vtk PolyData",vtkPolyData*,"");
  65 BBTK_INPUT(GeodesicMeshDeformation,EdgeId,"Edge Id",long,"");
  66 BBTK_INPUT(GeodesicMeshDeformation,S,"Deformation",double,"");
  67 BBTK_INPUT(GeodesicMeshDeformation,Center,"[X,Y,Z]",std::vector<double>,"");
  68 BBTK_INPUT(GeodesicMeshDeformation,Direction,"(default [1,0,0])   [X,Y,Z]",std::vector<double>,"");
  69 BBTK_OUTPUT(GeodesicMeshDeformation,Out,"double vector output, for output information for other tools",std::vector<double>,"");
  70 BBTK_END_DESCRIBE_BLACK_BOX(GeodesicMeshDeformation);
  71 //=====
  72 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
  73 //=====
  74 }
  75 // EO namespace bbitkvtk
  76
  77 #endif // __bbitkvtkGeodesicMeshDeformation_h_INCLUDED__
  78