2 # ---------------------------------------------------------------------
4 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
6 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
7 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
8 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
10 # This software is governed by the CeCILL-B license under French law and
11 # abiding by the rules of distribution of free software. You can use,
12 # modify and/ or redistribute the software under the terms of the CeCILL-B
13 # license as circulated by CEA, CNRS and INRIA at the following URL
14 # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
15 # or in the file LICENSE.txt.
17 # As a counterpart to the access to the source code and rights to copy,
18 # modify and redistribute granted by the license, users are provided only
19 # with a limited warranty and the software's author, the holder of the
20 # economic rights, and the successive licensors have only limited
23 # The fact that you are presently reading this means that you have had
24 # knowledge of the CeCILL-B license and that you accept its terms.
25 # ------------------------------------------------------------------------ */
29 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
31 #include "bbvtkImageBoundaries.h"
32 #include "bbvtkPackage.h"
33 #include "creaVtk_MACROS.h"
47 BBTK_ADD_BLACK_BOX_TO_PACKAGE(vtk,ImageBoundaries)
48 BBTK_BLACK_BOX_IMPLEMENTATION(ImageBoundaries,bbtk::AtomicBlackBox);
50 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
52 void ImageBoundaries::Process()
54 if (bbGetInputIn()!=NULL){
59 //EED 2017-01-01 Migration VTK7
60 #if (VTK_MAJOR_VERSION <= 5)
61 bbGetInputIn()->GetWholeExtent(ext);
63 #if (VTK_MAJOR_VERSION >= 6)
64 bbGetInputIn()->GetExtent(ext);
67 int maxX = ext[1]-ext[0]+1;
68 int maxY = ext[3]-ext[2]+1;
69 int maxZ = ext[5]-ext[4]+1;
78 #pragma omp parallel for
79 for (int i=0 ; i<maxX ; i++)
83 for (j=0 ; j<maxY ; j++)
85 for (k=0 ; k<maxZ ; k++)
87 double value = bbGetInputIn()->GetScalarComponentAsDouble(i, j, k,0);
88 if ( (value>=bbGetInputLowerValue()) && (value<=bbGetInputUpperValue()) )
102 DEF_POINTER_IMAGE_VTK_CREA(vI,ssI,pI,stI,bbGetInputIn())
104 for ( k=0 ; k<maxZ ; k++)
106 for (j=0 ; j<maxY ; j++)
108 for (i=0 ; i<maxX ; i++)
110 // double value = bbGetInputIn()->GetScalarComponentAsDouble(i, j, k,0);
111 GETVALUE2_VTK_CREA(vI,pI,stI,index)
113 if ( (vI>=bbGetInputLowerValue()) && (vI<=bbGetInputUpperValue()) )
115 if (i<bXMin) bXMin=i;
116 if (j<bYMin) bYMin=j;
117 if (k<bZMin) bZMin=k;
118 if (i>bXMax) bXMax=i;
119 if (j>bYMax) bYMax=j;
120 if (k>bZMax) bZMax=k;
125 std::vector<int> tmpIndex;
126 std::vector<int> tmpSize;
128 tmpIndex.push_back(0);
129 tmpIndex.push_back(0);
130 tmpIndex.push_back(0);
131 tmpSize.push_back(1);
132 tmpSize.push_back(1);
133 tmpSize.push_back(1);
135 tmpIndex.push_back(bXMin);
136 tmpIndex.push_back(bYMin);
137 tmpIndex.push_back(bZMin);
138 tmpSize.push_back(bXMax-bXMin+1);
139 tmpSize.push_back(bYMax-bYMin+1);
140 tmpSize.push_back(bZMax-bZMin+1);
142 bbSetOutputIndex(tmpIndex);
143 bbSetOutputSize(tmpSize);
145 printf("bbtk warnning: bbtk:vtk:ImageBoundaries box, Input image (In) not initialized..\n");
149 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
151 void ImageBoundaries::bbUserSetDefaultValues()
155 // SET HERE THE DEFAULT INPUT/OUTPUT VALUES OF YOUR BOX
157 bbSetInputLowerValue(0);
158 bbSetInputUpperValue(5000);
160 std::vector<int> tmpIndex;
161 tmpIndex.push_back(0);
162 tmpIndex.push_back(0);
163 tmpIndex.push_back(0);
165 std::vector<int> tmpSize;
166 tmpSize.push_back(1);
167 tmpSize.push_back(1);
168 tmpSize.push_back(1);
170 bbSetOutputIndex(tmpIndex);
171 bbSetOutputSize(tmpSize);
174 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
176 void ImageBoundaries::bbUserInitializeProcessing()
179 // THE INITIALIZATION METHOD BODY :
181 // but this is where you should allocate the internal/output pointers
187 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
189 void ImageBoundaries::bbUserFinalizeProcessing()
192 // THE FINALIZATION METHOD BODY :
194 // but this is where you should desallocate the internal/output pointers
199 // EO namespace bbvtk