2 # ---------------------------------------------------------------------
4 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
6 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
7 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
8 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
10 # This software is governed by the CeCILL-B license under French law and
11 # abiding by the rules of distribution of free software. You can use,
12 # modify and/ or redistribute the software under the terms of the CeCILL-B
13 # license as circulated by CEA, CNRS and INRIA at the following URL
14 # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
15 # or in the file LICENSE.txt.
17 # As a counterpart to the access to the source code and rights to copy,
18 # modify and redistribute granted by the license, users are provided only
19 # with a limited warranty and the software's author, the holder of the
20 # economic rights, and the successive licensors have only limited
23 # The fact that you are presently reading this means that you have had
24 # knowledge of the CeCILL-B license and that you accept its terms.
25 # ------------------------------------------------------------------------ */
29 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
31 #include "bbvtkImageBoundaries.h"
32 #include "bbvtkPackage.h"
33 #include "creaVtk_MACROS.h"
39 BBTK_ADD_BLACK_BOX_TO_PACKAGE(vtk,ImageBoundaries)
40 BBTK_BLACK_BOX_IMPLEMENTATION(ImageBoundaries,bbtk::AtomicBlackBox);
42 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
44 void ImageBoundaries::Process()
46 printf("bbtk:vtk::ImageBoundaries::Process start\n");
47 if (bbGetInputIn()!=NULL){
52 //EED 2017-01-01 Migration VTK7
53 #if (VTK_MAJOR_VERSION <= 5)
54 bbGetInputIn()->GetWholeExtent(ext);
56 #if (VTK_MAJOR_VERSION >= 6)
57 bbGetInputIn()->GetExtent(ext);
60 int maxX = ext[1]-ext[0]+1;
61 int maxY = ext[3]-ext[2]+1;
62 int maxZ = ext[5]-ext[4]+1;
71 #pragma omp parallel for
72 for (int i=0 ; i<maxX ; i++)
76 for (j=0 ; j<maxY ; j++)
78 for (k=0 ; k<maxZ ; k++)
80 double value = bbGetInputIn()->GetScalarComponentAsDouble(i, j, k,0);
81 if ( (value>=bbGetInputLowerValue()) && (value<=bbGetInputUpperValue()) )
95 DEF_POINTER_IMAGE_VTK_CREA(vI,ssI,pI,stI,bbGetInputIn())
99 for (int k=0 ; k<maxZ ; k++)
101 for (j=0 ; j<maxY ; j++)
103 for (i=0 ; i<maxX ; i++)
105 // double value = bbGetInputIn()->GetScalarComponentAsDouble(i, j, k,0);
106 GETVALUE2_VTK_CREA(vI,pI,stI,index)
108 if ( (vI>=bbGetInputLowerValue()) && (vI<=bbGetInputUpperValue()) )
110 if (i<bXMin) bXMin=i;
111 if (j<bYMin) bYMin=j;
112 if (k<bZMin) bZMin=k;
113 if (i>bXMax) bXMax=i;
114 if (j>bYMax) bYMax=j;
115 if (k>bZMax) bZMax=k;
120 std::vector<int> tmpIndex;
121 std::vector<int> tmpSize;
123 tmpIndex.push_back(0);
124 tmpIndex.push_back(0);
125 tmpIndex.push_back(0);
126 tmpSize.push_back(1);
127 tmpSize.push_back(1);
128 tmpSize.push_back(1);
130 tmpIndex.push_back(bXMin);
131 tmpIndex.push_back(bYMin);
132 tmpIndex.push_back(bZMin);
133 tmpSize.push_back(bXMax-bXMin+1);
134 tmpSize.push_back(bYMax-bYMin+1);
135 tmpSize.push_back(bZMax-bZMin+1);
137 bbSetOutputIndex(tmpIndex);
138 bbSetOutputSize(tmpSize);
140 printf("bbtk warnning: bbtk:vtk:ImageBoundaries box, Input image (In) not initialized..\n");
144 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
146 void ImageBoundaries::bbUserSetDefaultValues()
150 // SET HERE THE DEFAULT INPUT/OUTPUT VALUES OF YOUR BOX
152 bbSetInputLowerValue(0);
153 bbSetInputUpperValue(5000);
155 std::vector<int> tmpIndex;
156 tmpIndex.push_back(0);
157 tmpIndex.push_back(0);
158 tmpIndex.push_back(0);
160 std::vector<int> tmpSize;
161 tmpSize.push_back(1);
162 tmpSize.push_back(1);
163 tmpSize.push_back(1);
165 bbSetOutputIndex(tmpIndex);
166 bbSetOutputSize(tmpSize);
169 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
171 void ImageBoundaries::bbUserInitializeProcessing()
174 // THE INITIALIZATION METHOD BODY :
176 // but this is where you should allocate the internal/output pointers
182 // Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
184 void ImageBoundaries::bbUserFinalizeProcessing()
187 // THE FINALIZATION METHOD BODY :
189 // but this is where you should desallocate the internal/output pointers
194 // EO namespace bbvtk