plugins/cpPluginsImageFilters/IsoImageSlicer.cxx

   1 #include <cpPluginsImageFilters/IsoImageSlicer.h>
   2 #include <cpPlugins/Image.h>
   3 #include <cpPlugins_ITKInstances/ImageFilters.h>
   4
   5 #include <cpExtensions/Algorithms/IsoImageSlicer.h>
   6 #include <cpExtensions/Algorithms/IsoImageSlicer.hxx>
   7 #include <itkAffineTransform.hxx>
   8 #include <itkMatrixOffsetTransformBase.hxx>
   9 #include <itkVariableLengthVector.hxx>
  10 #include <itkDiffusionTensor3D.hxx>
  11 #include <itkOptimizerParameters.hxx>
  12 /*
  13   #include <itkIsoImageSlicer.h>
  14   #include <itkIsoImageSlicer.hxx>
  15   #include <itkUnaryFunctorImageFilter.hxx>
  16 */
  17
  18 // -------------------------------------------------------------------------
  19 cpPluginsImageFilters::IsoImageSlicer::
  20 IsoImageSlicer( )
  21   : Superclass( )
  22 {
  23   this->_AddInput( "Input" );
  24   this->_AddOutput< cpPlugins::Image >( "Output" );
  25
  26   std::vector< std::string > choices;
  27   choices.push_back( "float" );
  28   choices.push_back( "double" );
  29   this->m_Parameters.ConfigureAsChoices( "ScalarType", choices );
  30   this->m_Parameters.SetSelectedChoice( "ScalarType", "float" );
  31   /* TODO
  32      this->m_Parameters.ConfigureAsReal( "LowerThresholdValue" );
  33      this->m_Parameters.ConfigureAsReal( "UpperThresholdValue" );
  34      this->m_Parameters.ConfigureAsUint( "InsideValue" );
  35      this->m_Parameters.ConfigureAsUint( "OutsideValue" );
  36
  37      this->m_Parameters.SetReal( "LowerThresholdValue", 0 );
  38      this->m_Parameters.SetReal( "UpperThresholdValue", 10000 );
  39      this->m_Parameters.SetReal( "InsideValue", 1 );
  40      this->m_Parameters.SetReal( "OutsideValue", 0 );
  41   */
  42 }
  43
  44 // -------------------------------------------------------------------------
  45 cpPluginsImageFilters::IsoImageSlicer::
  46 ~IsoImageSlicer( )
  47 {
  48 }
  49
  50 // -------------------------------------------------------------------------
  51 std::string cpPluginsImageFilters::IsoImageSlicer::
  52 _GenerateData( )
  53 {
  54   auto image = this->GetInputData( "Input" )->GetITK< itk::DataObject >( );
  55   std::string cpPlugin_Image_Demangle_Pixel_AllScalars( r, _GD0, image, 3 );
  56   return( r );
  57 }
  58
  59 // -------------------------------------------------------------------------
  60 template< class _TImage >
  61 std::string cpPluginsImageFilters::IsoImageSlicer::
  62 _GD0( _TImage* image )
  63 {
  64   if( image != NULL )
  65   {
  66     auto choice = this->m_Parameters.GetSelectedChoice( "OutputResolution" );
  67     if( choice == "float" )
  68       return( this->_GD1< _TImage, float >( image ) );
  69     else if( choice == "double" )
  70       return( this->_GD1< _TImage, double >( image ) );
  71     else return( "IsoImageSlicer: no valid scalar type." );
  72   }
  73   else
  74     return(
  75       "ImageFilters::IsoImageSlicer: No valid input image."
  76       );
  77 }
  78
  79 // -------------------------------------------------------------------------
  80 template< class _TImage, class _TScalar >
  81 std::string cpPluginsImageFilters::IsoImageSlicer::
  82 _GD1( _TImage* image )
  83 {
  84   typedef
  85     cpExtensions::Algorithms::IsoImageSlicer< _TImage, _TScalar >
  86     _TFilter;
  87   typedef typename _TFilter::TVector _TVector;
  88   typedef typename _TFilter::TMatrix _TMatrix;
  89
  90   // Configure filter
  91   _TFilter* filter = this->_CreateITK< _TFilter >( );
  92   filter->SetInput( image );
  93   filter->SetInterpolator( NULL );
  94   filter->SetTranslation( _TVector( ) );
  95   filter->SetRotation( _TMatrix( ) );
  96   filter->SetSize( 1 );
  97   /* TODO
  98      filter->SetLowerThreshold( lower_val );
  99      filter->SetUpperThreshold( upper_val );
 100      filter->SetInsideValue( in_val );
 101      filter->SetOutsideValue( out_val );
 102      filter->Update( );
 103   */
 104
 105   // Connect output
 106   this->GetOutputData( "Output" )->SetITK( filter->GetOutput( ) );
 107   return( "" );
 108 }
 109
 110 #include <cpExtensions/Algorithms/BezierCurveFunction.h>
 111 #include <cpExtensions/Algorithms/BezierCurveFunction.hxx>
 112
 113 template class cpPluginsImageFilters_EXPORT cpExtensions::Algorithms::BezierCurveFunction< itk::Vector< float, 3 > >;
 114 template class cpPluginsImageFilters_EXPORT cpExtensions::Algorithms::BezierCurveFunction< itk::Vector< double, 3 > >;
 115
 116 // eof - $RCSfile$