1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
18 #ifndef _clitkBSplineDeformableRegistrationGenericFilter_h
19 #define _clitkBSplineDeformableRegistrationGenericFilter_h
21 =================================================
22 * @file clitkBSplineDeformableRegistrationGenericFilter.h
23 * @author Jef Vandemeulebroucke <jef@creatis.insa-lyon.fr>
28 =================================================*/
31 #include "clitkBSplineDeformableRegistration_ggo.h"
33 #include "clitkImageCommon.h"
34 #include "clitkDifferenceImageFilter.h"
35 #include "clitkTransformUtilities.h"
36 #include "clitkLBFGSBOptimizer.h"
37 #include "clitkBSplineDeformableTransform.h"
38 #include "clitkGenericOptimizer.h"
39 #include "clitkGenericInterpolator.h"
40 #include "clitkGenericMetric.h"
43 #include "itkMultiResolutionImageRegistrationMethod.h"
44 #include "itkMultiResolutionPyramidImageFilter.h"
46 #include "itkBSplineDeformableTransform.h"
47 #include "itkImageFileReader.h"
48 #include "itkImageFileWriter.h"
49 #include "itkResampleImageFilter.h"
50 #include "itkCommand.h"
51 #include "itkImageMaskSpatialObject.h"
52 #include "itkEuler3DTransform.h"
53 #include "itkWarpImageFilter.h"
54 #include "itkLightObject.h"
55 #include "itkImageToImageMetric.h"
56 #include "itkInterpolateImageFunction.h"
57 #include "itkLabelStatisticsImageFilter.h"
63 class ITK_EXPORT BSplineDeformableRegistrationGenericFilter : public itk::LightObject
67 typedef BSplineDeformableRegistrationGenericFilter Self;
68 typedef itk::LightObject Superclass;
69 typedef itk::SmartPointer<Self> Pointer;
70 typedef itk::SmartPointer<const Self> ConstPointer;
72 /** Method for creation through the object factory. */
75 /** Run-time type information (and related methods) */
76 itkTypeMacro( BSplineDeformableRegistrationGenericFilter, LightObject );
79 //====================================================================
81 void SetArgsInfo(const args_info_clitkBSplineDeformableRegistration& a)
84 m_ReferenceFileName=m_ArgsInfo.reference_arg;
85 m_Verbose=m_ArgsInfo.verbose_flag;
88 //====================================================================
90 virtual void Update();
93 //const char * GetNameOfClass() const { return "BSplineDeformableRegistrationGenericFilter"; }
95 //====================================================================
96 // Constructor & Destructor
97 BSplineDeformableRegistrationGenericFilter();
98 ~BSplineDeformableRegistrationGenericFilter(){;}
100 //====================================================================
101 //Protected member functions
102 template <unsigned int Dimension> void UpdateWithDim(std::string PixelType);
103 template <unsigned int Dimension, class PixelType> void UpdateWithDimAndPixelType();
105 args_info_clitkBSplineDeformableRegistration m_ArgsInfo;
107 std::string m_ReferenceFileName;
111 } // end namespace clitk
112 #ifndef ITK_MANUAL_INSTANTIATION
113 #include "clitkBSplineDeformableRegistrationGenericFilter.txx"
116 #endif //#define _clitkBSplineDeformableRegistrationGenericFilter_h