1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ======================================================================-====*/
18 #ifndef clitkShapedBLUTSpatioTemporalDIRGenericFilter_h
19 #define clitkShapedBLUTSpatioTemporalDIRGenericFilter_h
21 /* =================================================
22 * @file clitkShapedBLUTSpatioTemporalDIRGenericFilter.h
28 ===================================================*/
32 #include "clitkShapedBLUTSpatioTemporalDIR_ggo.h"
34 #include "clitkCommon.h"
35 #include "clitkGenericOptimizer.h"
36 #include "clitkGenericMetric.h"
37 #include "clitkGenericInterpolator.h"
38 #include "clitkShapedBLUTSpatioTemporalDeformableTransform.h"
39 #include "clitkShapedBLUTSpatioTemporalDeformableTransformInitializer.h"
40 #include "clitkSpatioTemporalMultiResolutionImageRegistrationMethod.h"
41 #include "clitkSpatioTemporalMultiResolutionPyramidImageFilter.h"
42 #include "clitkDifferenceImageFilter.h"
43 #include "clitkMultiResolutionPyramidRegionFilter.h"
46 #include "itkLightObject.h"
47 #include "itkLabelStatisticsImageFilter.h"
48 #include "itkImageMaskSpatialObject.h"
49 #include "itkImageToImageMetric.h"
50 #include "itkInterpolateImageFunction.h"
51 #include "itkWarpImageFilter.h"
52 #include "itkImageDuplicator.h"
53 #include "itkExtractImageFilter.h"
54 #include "itkCropImageFilter.h"
60 class ITK_EXPORT ShapedBLUTSpatioTemporalDIRGenericFilter : public itk::LightObject
63 //----------------------------------------
65 //----------------------------------------
66 typedef ShapedBLUTSpatioTemporalDIRGenericFilter Self;
67 typedef itk::LightObject Superclass;
68 typedef itk::SmartPointer<Self> Pointer;
69 typedef itk::SmartPointer<const Self> ConstPointer;
71 // Method for creation through the object factory
74 // Run-time type information (and related methods)
75 itkTypeMacro( ShapedBLUTSpatioTemporalDIRGenericFilter, LightObject );
78 //----------------------------------------
80 //----------------------------------------
83 //----------------------------------------
85 //----------------------------------------
86 void SetArgsInfo(const args_info_clitkShapedBLUTSpatioTemporalDIR & a)
89 m_Verbose=m_ArgsInfo.verbose_flag;
90 m_ReferenceFileName=m_ArgsInfo.reference_arg;
94 //----------------------------------------
96 //----------------------------------------
101 //----------------------------------------
102 // Constructor & Destructor
103 //----------------------------------------
104 ShapedBLUTSpatioTemporalDIRGenericFilter();
105 ~ShapedBLUTSpatioTemporalDIRGenericFilter() {};
108 //----------------------------------------
110 //----------------------------------------
111 template <unsigned int Dimension> void UpdateWithDim(std::string PixelType);
112 template <unsigned int Dimension, class PixelType> void UpdateWithDimAndPixelType();
115 //----------------------------------------
117 //----------------------------------------
118 args_info_clitkShapedBLUTSpatioTemporalDIR m_ArgsInfo;
120 std::string m_ReferenceFileName;
124 } // end namespace clitk
126 #ifndef ITK_MANUAL_INSTANTIATION
127 #include "clitkShapedBLUTSpatioTemporalDIRGenericFilter.txx"
130 #endif // #define clitkShapedBLUTSpatioTemporalDIRGenericFilter_h