1 #=========================================================
2 IF (CLITK_USE_SYSTEM_GDCM)
3 FIND_PACKAGE(GDCM REQUIRED)
4 SET(ITK_LIBRARIES ${ITK_LIBRARIES} gdcmDICT gdcmMSFF)
7 #=========================================================
9 # Add Libraries used in vv and clitk to avoid recompilation
10 FOREACH(clitkTool clitkExtractLung clitkExtractPatient clitkConnectedComponentLabeling clitkRegionGrowing)
11 WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
12 SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
14 ADD_LIBRARY(clitkSegmentationGgoLib
15 clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx
16 clitkAnatomicalFeatureDatabase.cxx
17 clitkSliceBySliceRelativePositionFilter_uchar.cxx
20 #=========================================================
22 IF(CLITK_BUILD_SEGMENTATION)
23 WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo)
24 ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C})
25 TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ${ITK_LIBRARIES})
26 SET(SEGMENTATION_INSTALL clitkConnectedComponentLabeling)
28 ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C})
29 TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
30 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractPatient)
32 ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx ${clitkExtractLung_GGO_C})
33 TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
34 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLung)
36 WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
37 ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
38 TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
39 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractBones)
41 WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
42 ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
43 TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
44 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMorphoMath)
46 WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
47 ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
48 TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
49 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkDecomposeAndReconstruct)
51 WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo)
52 ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
53 TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
54 SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMotionMask)
56 WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
57 ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx ${clitkRegionGrowing_GGO_C} ${clitkRelativePosition_GGO_C})
58 TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
60 INSTALL (TARGETS ${SEGMENTATION_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
62 ENDIF(CLITK_BUILD_SEGMENTATION)
64 # ADD_EXECUTABLE(ScalarImageMarkovRandomField1 ScalarImageMarkovRandomField1.cxx)
65 # TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ${ITK_LIBRARIES} ITKStatistics)
66 # ADD_EXECUTABLE(ScalarImageKmeansClassifier ScalarImageKmeansClassifier.cxx)
67 # TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ${ITK_LIBRARIES} ITKStatistics)