segmentation/CMakeLists.txt

   1 #=========================================================
   2 IF (CLITK_USE_SYSTEM_GDCM)
   3   FIND_PACKAGE(GDCM REQUIRED)
   4   SET(ITK_LIBRARIES ${ITK_LIBRARIES} gdcmDICT gdcmMSFF)
   5 ENDIF()
   6
   7 #=========================================================
   8
   9 # Add Libraries used in vv and clitk to avoid recompilation
  10 FOREACH(clitkTool clitkExtractLung clitkExtractPatient clitkConnectedComponentLabeling clitkRegionGrowing)
  11     WRAP_GGO(${clitkTool}_GGO_C ${clitkTool}.ggo)
  12     SET(GGO_C_FILES ${GGO_C_FILES} ${${clitkTool}_GGO_C})
  13 ENDFOREACH(clitkTool)
  14 ADD_LIBRARY(clitkSegmentationGgoLib
  15             clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx
  16             clitkAnatomicalFeatureDatabase.cxx
  17             clitkSliceBySliceRelativePositionFilter_uchar.cxx
  18             ${GGO_C_FILES})
  19
  20 #=========================================================
  21
  22 IF(CLITK_BUILD_SEGMENTATION)
  23     WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo)
  24     ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C})
  25     TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ${ITK_LIBRARIES})
  26     SET(SEGMENTATION_INSTALL clitkConnectedComponentLabeling)
  27
  28     ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C})
  29     TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
  30     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractPatient)
  31
  32     ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx  ${clitkExtractLung_GGO_C})
  33     TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
  34     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractLung)
  35
  36     WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
  37     ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
  38     TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
  39     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkExtractBones)
  40
  41     WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
  42     ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
  43     TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
  44     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMorphoMath)
  45
  46     WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
  47     ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
  48     TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
  49     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkDecomposeAndReconstruct)
  50
  51     WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo)
  52     ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
  53     TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
  54     SET(SEGMENTATION_INSTALL ${SEGMENTATION_INSTALL} clitkMotionMask)
  55
  56     WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
  57     ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx ${clitkRegionGrowing_GGO_C} ${clitkRelativePosition_GGO_C})
  58     TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
  59
  60     INSTALL (TARGETS ${SEGMENTATION_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
  61
  62 ENDIF(CLITK_BUILD_SEGMENTATION)
  63
  64 # ADD_EXECUTABLE(ScalarImageMarkovRandomField1 ScalarImageMarkovRandomField1.cxx)
  65 # TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ${ITK_LIBRARIES} ITKStatistics)
  66 # ADD_EXECUTABLE(ScalarImageKmeansClassifier ScalarImageKmeansClassifier.cxx)
  67 # TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ${ITK_LIBRARIES} ITKStatistics)
  68
  69