1 /*=========================================================================
2 Program: vv http://www.creatis.insa-lyon.fr/rio/vv
5 - University of LYON http://www.universite-lyon.fr/
6 - Léon Bérard cancer center http://www.centreleonberard.fr
7 - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
9 This software is distributed WITHOUT ANY WARRANTY; without even
10 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11 PURPOSE. See the copyright notices for more information.
13 It is distributed under dual licence
15 - BSD See included LICENSE.txt file
16 - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
17 ===========================================================================**/
19 #ifndef CLITKEXTRACTAIRWAYTREEINFOSGENERICFILTER_TXX
20 #define CLITKEXTRACTAIRWAYTREEINFOSGENERICFILTER_TXX
22 #include "clitkImageCommon.h"
24 //--------------------------------------------------------------------
25 template<class ArgsInfoType>
26 clitk::ExtractAirwaysTreeInfoGenericFilter<ArgsInfoType>::ExtractAirwaysTreeInfoGenericFilter():
27 ImageToImageGenericFilter<Self>("ExtractAirwaysTreeInfo")
29 this->SetFilterBase(NULL);
31 cmdline_parser_clitkExtractAirwaysTreeInfo_init(&mArgsInfo);
32 InitializeImageType<3>();
34 //--------------------------------------------------------------------
37 //--------------------------------------------------------------------
38 template<class ArgsInfoType>
39 template<unsigned int Dim>
40 void clitk::ExtractAirwaysTreeInfoGenericFilter<ArgsInfoType>::InitializeImageType()
42 ADD_IMAGE_TYPE(Dim, uchar);
43 // ADD_IMAGE_TYPE(Dim, int);
44 // ADD_IMAGE_TYPE(Dim, float);
46 //--------------------------------------------------------------------
49 //--------------------------------------------------------------------
50 template<class ArgsInfoType>
51 void clitk::ExtractAirwaysTreeInfoGenericFilter<ArgsInfoType>::SetArgsInfo(const ArgsInfoType & a)
54 SetIOVerbose(mArgsInfo.verbose_flag);
55 if (mArgsInfo.imagetypes_flag) this->PrintAvailableImageTypes();
56 if (mArgsInfo.input_given) AddInputFilename(mArgsInfo.input_arg);
57 if (mArgsInfo.output_given) AddOutputFilename(mArgsInfo.output_arg);
59 //--------------------------------------------------------------------
62 //--------------------------------------------------------------------
63 template<class ArgsInfoType>
64 template<class FilterType>
65 void clitk::ExtractAirwaysTreeInfoGenericFilter<ArgsInfoType>::
66 SetOptionsFromArgsInfoToFilter(FilterType * f)
68 f->SetVerboseOptionFlag(mArgsInfo.verboseOption_flag);
69 f->SetVerboseStepFlag(mArgsInfo.verboseStep_flag);
70 f->SetWriteStepFlag(mArgsInfo.writeStep_flag);
71 f->SetVerboseWarningFlag(!mArgsInfo.verboseWarningOff_flag);
72 if (mArgsInfo.afdb_given)
73 f->SetAFDBFilename(mArgsInfo.afdb_arg);
75 //--------------------------------------------------------------------
78 //--------------------------------------------------------------------
79 // Update with the number of dimensions and the pixeltype
80 //--------------------------------------------------------------------
81 template<class ArgsInfoType>
82 template<class ImageType>
83 void clitk::ExtractAirwaysTreeInfoGenericFilter<ArgsInfoType>::UpdateWithInputImageType()
86 typename ImageType::Pointer input = this->template GetInput<ImageType>(0);
89 typedef clitk::ExtractAirwaysTreeInfoFilter<ImageType> FilterType;
90 typename FilterType::Pointer filter = FilterType::New();
92 // Set the filter (needed for example for threaded monitoring)
93 this->SetFilterBase(filter);
96 filter->SetInput(input);
97 SetOptionsFromArgsInfoToFilter<FilterType>(filter);
102 // Write/Save results
103 typename ImageType::Pointer output = filter->GetOutput();
104 this->template SetNextOutput<ImageType>(output);
107 //--------------------------------------------------------------------
109 #endif //#define CLITKEXTRACTAIRWAYTREEINFOSGENERICFILTER_TXX