]> Creatis software - clitk.git/blob - segmentation/clitkMorphoReconstruction.ggo
a hopefully better option parser for vv
[clitk.git] / segmentation / clitkMorphoReconstruction.ggo
1 #File clitkMorphoReconstruction.ggo
2 package "clitkMorphoReconstruction"
3 version "1.0"
4 purpose "Morphological reconstruction: restore a marker image by preserving regions and using a mask image. For opening and closing, the mask is the original image."
5
6 option "config"         -       "Config file"                     string        no
7 option "verbose"        v       "Verbose"                         flag          off
8
9 section "I/O"
10
11 option "input"          i       "Input image filename"            string        yes
12 option "output"         o       "Output image filename"           string        yes
13
14
15 section "Morpho parameters"
16
17 option "type"           t       "0=Erode, 1=Dilate, 2=Close (erode(dilate(x))), 3=Open (dilate(erode(x)))"      int             no      default="0"
18 option "mask"           m       "0-1: Mask image filename"                string        no
19 option "full"           -       "2-3: Use full connectivity"                                                    flag            off 
20 option "int"            -       "2-3: Preserve intensities"                                                     flag            off
21 option "radius"         r       "2-3: Preserve intensities"                                                     double          no     default="1.0"