segmentation/clitkMorphoReconstruction.ggo

   1 #File clitkMorphoReconstruction.ggo
   2 package "clitkMorphoReconstruction"
   3 version "1.0"
   4 purpose "Morphological reconstruction: restore a marker image by preserving regions and using a mask image. For opening and closing, the mask is the original image."
   5
   6 option "config"         -       "Config file"                     string        no
   7 option "verbose"        v       "Verbose"                         flag          off
   8
   9 section "I/O"
  10
  11 option "input"          i       "Input image filename"            string        yes
  12 option "output"         o       "Output image filename"           string        yes
  13
  14
  15 section "Morpho parameters"
  16
  17 option "type"           t       "0=Erode, 1=Dilate, 2=Close (erode(dilate(x))), 3=Open (dilate(erode(x)))"      int             no      default="0"
  18 option "mask"           m       "0-1: Mask image filename"                string        no
  19 option "full"           -       "2-3: Use full connectivity"                                                    flag            off
  20 option "int"            -       "2-3: Preserve intensities"                                                     flag            off
  21 option "radius"         r       "2-3: Preserve intensities"                                                     double          no     default="1.0"