tools/CMakeLists.txt

   1 #=========================================================
   2 # Add Libraries used in vv and clitk to avoid recompilation
   3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
   4 add_library(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
   5
   6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
   7 add_library(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
   8
   9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
  10 add_library(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
  11
  12 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
  13 add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
  14
  15 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
  16 add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
  17
  18 WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
  19 add_library(clitkResampleImageLib clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C})
  20
  21 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
  22 add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
  23
  24 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
  25 add_library(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
  26
  27 #=========================================================
  28 if(CLITK_BUILD_TOOLS)
  29
  30   WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
  31   add_executable(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
  32   target_link_libraries(clitkDicomInfo clitkCommon)
  33   # set_target_properties(clitkDicomInfo
  34   #   PROPERTIES
  35   #   LINK_INTERFACE_LIBRARIES ""
  36   #   )
  37   set(TOOLS_INSTALL clitkDicomInfo)
  38
  39   WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
  40   add_executable(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
  41   target_link_libraries(clitkDicom2Image clitkCommon)
  42   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
  43
  44   WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
  45   add_executable(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
  46   target_link_libraries(clitkDicomWave2Text clitkCommon)
  47   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
  48
  49   WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
  50   add_executable(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
  51   target_link_libraries(clitkImageInfo clitkCommon)
  52   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
  53
  54   add_executable(clitkImageConvert clitkImageConvert.cxx)
  55   target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon)
  56   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
  57
  58   add_executable(clitkBinarizeImage clitkBinarizeImage.cxx)
  59   target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
  60   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
  61
  62   WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
  63   add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
  64   target_link_libraries(clitkVFResample clitkCommon)
  65   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
  66
  67   WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
  68   add_executable(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
  69   target_link_libraries(clitkVFInterpolate clitkCommon)
  70   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
  71
  72   WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
  73   add_executable(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
  74   target_link_libraries(clitkImageCreate clitkCommon)
  75   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
  76
  77   WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
  78   add_executable(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
  79   target_link_libraries(clitkZeroVF clitkCommon)
  80   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
  81
  82   WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
  83   add_executable(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
  84   target_link_libraries(clitkSplitImage clitkCommon )
  85   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
  86
  87   WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
  88   add_executable(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
  89   target_link_libraries(clitkWriteDicomSeries clitkCommon )
  90   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
  91
  92   WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
  93   add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
  94     ${clitkMedianTemporalDimension_GGO_C})
  95   target_link_libraries(clitkMedianTemporalDimension clitkCommon )
  96   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
  97
  98   WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
  99   add_executable(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
 100   target_link_libraries(clitkWarpImage clitkCommon)
 101   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
 102
 103   WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
 104   add_executable(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
 105   target_link_libraries(clitkInvertVF clitkCommon)
 106   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
 107
 108   WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
 109   add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
 110   target_link_libraries(clitkAffineTransform clitkCommon )
 111   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
 112
 113   WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
 114   add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
 115   target_link_libraries(clitkElastixTransformToMatrix clitkCommon )
 116   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
 117
 118   WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
 119   add_executable(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
 120   target_link_libraries(clitkMatrixToElastixTransform clitkCommon )
 121   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
 122
 123   WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
 124   add_executable(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
 125   target_link_libraries(clitkMatrixMultiply clitkCommon )
 126   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
 127
 128   WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
 129   add_executable(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
 130   target_link_libraries(clitkMatrixInverse clitkCommon )
 131   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
 132
 133   WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
 134   add_executable(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
 135   target_link_libraries(clitkSetBackground clitkCommon)
 136   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
 137
 138   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
 139   add_executable(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
 140   target_link_libraries(clitkGammaIndex clitkCommon)
 141   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
 142
 143   add_executable(clitkImageArithm clitkImageArithm.cxx)
 144   target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
 145   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
 146
 147   add_executable(clitkVectorArithm clitkVectorArithm.cxx)
 148   target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
 149   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
 150
 151   WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
 152   add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
 153   target_link_libraries(clitkUnsharpMask clitkCommon )
 154   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
 155
 156   WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
 157   add_executable(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
 158   target_link_libraries(clitkFooImage clitkCommon )
 159   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFooImage)
 160
 161   WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
 162   add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
 163   target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
 164   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
 165
 166   add_executable(clitkResampleImage clitkResampleImage.cxx)
 167   target_link_libraries(clitkResampleImage clitkResampleImageLib clitkCommon)
 168   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage)
 169
 170   WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
 171   add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
 172   target_link_libraries(clitkMinMaxMask clitkCommon  )
 173   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
 174
 175   WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
 176   add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
 177   target_link_libraries(clitkAutoCrop clitkCommon )
 178   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
 179
 180   WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
 181   add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
 182   target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
 183   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
 184
 185   if(CLITK_USE_SYSTEM_GDCM)
 186     WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
 187     add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
 188     target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
 189   endif()
 190
 191   WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
 192   add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
 193   target_link_libraries(clitkComposeVF clitkCommon  )
 194   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
 195
 196   WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
 197   add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
 198   target_link_libraries(clitkMergeSequence clitkCommon)
 199   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
 200
 201   WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
 202   add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
 203   target_link_libraries(clitkBackProjectImage clitkCommon)
 204   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
 205
 206   add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
 207   target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
 208   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
 209
 210   # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
 211   # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
 212   # target_link_libraries(clitkExtractSlice clitkCommon)
 213   #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
 214
 215   WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
 216   add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
 217   target_link_libraries(clitkFlipImage clitkCommon)
 218   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
 219
 220   WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
 221   add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
 222   target_link_libraries(clitkMirrorPadImage clitkCommon)
 223   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
 224
 225   WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
 226   add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
 227   target_link_libraries(clitkImageMoment clitkCommon)
 228   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
 229
 230   WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
 231   add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
 232   target_link_libraries(clitkImageStatistics clitkCommon)
 233   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
 234
 235   WRAP_GGO(clitkDVH_GGO_C clitkDVH.ggo)
 236   add_executable(clitkDVH clitkDVH.cxx clitkDVHGenericFilter.cxx ${clitkDVH_GGO_C})
 237   target_link_libraries(clitkDVH clitkVectorArithmLib clitkCommon)
 238   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDVH)
 239
 240   WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
 241   add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
 242   target_link_libraries(clitkVFConvert clitkCommon )
 243   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
 244
 245   WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
 246   add_executable(clitkImageToVectorImage  clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
 247   target_link_libraries(clitkImageToVectorImage  clitkCommon)
 248   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
 249
 250   WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
 251   add_executable(clitkVectorImageToImage  clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
 252   target_link_libraries(clitkVectorImageToImage  clitkCommon)
 253   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
 254
 255   add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
 256   target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
 257   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
 258
 259   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
 260   add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
 261   target_link_libraries(clitkTransformLandmarks clitkCommon)
 262   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
 263
 264   WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
 265   add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
 266   target_link_libraries(clitkMaskLandmarks clitkCommon)
 267   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
 268
 269   WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
 270   add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
 271   target_link_libraries(clitkJacobianImage clitkCommon)
 272   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
 273
 274   WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
 275   add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
 276   target_link_libraries(clitkPadImage clitkCommon)
 277   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
 278
 279   WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
 280   add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
 281   target_link_libraries(clitkCatImage clitkCommon)
 282   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
 283
 284   WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
 285   add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
 286     clitkAnisotropicDiffusionGenericFilter.cxx
 287     ${clitkAnisotropicDiffusion_GGO_C})
 288   target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
 289   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
 290
 291   WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
 292   add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
 293     clitkChangeImageInfoGenericFilter.cxx
 294     ${clitkChangeImageInfo_GGO_C})
 295   target_link_libraries(clitkChangeImageInfo clitkCommon)
 296   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
 297
 298   WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
 299   add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
 300   target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
 301   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
 302
 303   WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
 304   add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
 305   target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
 306   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
 307
 308   WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
 309   add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
 310   target_link_libraries(clitkNormalizeImageFilter clitkCommon )
 311   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
 312
 313   WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
 314   add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
 315   target_link_libraries(clitkImageGradientMagnitude clitkCommon )
 316   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
 317
 318   WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
 319   add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
 320   target_link_libraries(clitkImageLaplacian clitkCommon )
 321   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
 322
 323   WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
 324   add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
 325   target_link_libraries(clitkImageIntensityWindowing clitkCommon )
 326   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
 327
 328   WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
 329   add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
 330   target_link_libraries(clitkBlurImage clitkCommon )
 331   set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
 332
 333   #=========================================================
 334   option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
 335   if (CLITK_USE_ROOT)
 336     find_package(ROOT REQUIRED)
 337     if(ROOT_FOUND)
 338       message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
 339     else(ROOT_FOUND)
 340       message(FATAL_ERROR
 341         "Cannot build without ROOT.  Please set ROOTSYS environement variable.")
 342     endif(ROOT_FOUND)
 343     include_directories(${ROOT_INCLUDE_DIR})
 344     link_directories(${ROOT_LIBRARY_DIR})
 345     WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
 346     add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
 347     target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
 348     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
 349   endif()
 350   #=========================================================
 351
 352
 353   #=========================================================
 354   if(CLITK_EXPERIMENTAL)
 355     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
 356     add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
 357     target_link_libraries(clitkBinaryImageToMesh clitkCommon)
 358     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
 359
 360     WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
 361     add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
 362     target_link_libraries(clitkMeshToBinaryImage clitkCommon)
 363     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
 364
 365     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
 366     add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
 367     target_link_libraries(clitkMeshViewer clitkCommon)
 368     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
 369   endif(CLITK_EXPERIMENTAL)
 370   #=========================================================
 371
 372
 373   #=========================================================
 374   if(ITK_VERSION_MAJOR VERSION_LESS 4)
 375     message("clitkDice is not compatible with ITK<4. It will not be built.")
 376     message("clitkDicomRTPlan2Gate is not compatible with GDCM<2 (ITK<4). It will not be built.")
 377   else(ITK_VERSION_MAJOR VERSION_LESS 4)
 378     WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
 379     add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
 380     target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
 381     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
 382
 383     WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
 384     add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
 385     target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
 386     set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
 387   endif(ITK_VERSION_MAJOR VERSION_LESS 4)
 388   #=========================================================
 389
 390
 391   install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
 392
 393 endif(CLITK_BUILD_TOOLS)