1 #=========================================================
2 # Add Libraries used in vv and clitk to avoid recompilation
3 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
4 add_library(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
6 WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
7 add_library(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
9 WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
10 add_library(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
12 WRAP_GGO(clitkProfileImage_GGO_C clitkProfileImage.ggo)
13 add_library(clitkProfileImageLib clitkProfileImageGenericFilter.cxx ${clitkProfileImage_GGO_C})
15 WRAP_GGO(clitkHistogramImage_GGO_C clitkHistogramImage.ggo)
16 add_library(clitkHistogramImageLib clitkHistogramImageGenericFilter.cxx ${clitkHistogramImage_GGO_C})
18 WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
19 add_library(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
21 WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
22 add_library(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
24 WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
25 add_library(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
27 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
28 add_library(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
30 #=========================================================
33 WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
34 add_executable(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
35 target_link_libraries(clitkDicomInfo clitkCommon)
36 # set_target_properties(clitkDicomInfo
38 # LINK_INTERFACE_LIBRARIES ""
40 set(TOOLS_INSTALL clitkDicomInfo)
42 WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
43 add_executable(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
44 target_link_libraries(clitkDicom2Image clitkCommon)
45 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
47 WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
48 add_executable(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
49 target_link_libraries(clitkDicomWave2Text clitkCommon)
50 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
52 WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
53 add_executable(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
54 target_link_libraries(clitkImageInfo clitkCommon)
55 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
57 WRAP_GGO(clitkScintivolStats_GGO_C clitkScintivolStats.ggo)
58 add_executable(clitkScintivolStats clitkScintivolStats.cxx ${clitkScintivolStats_GGO_C})
59 target_link_libraries(clitkScintivolStats clitkCommon)
60 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkScintivolStats)
62 add_executable(clitkImageConvert clitkImageConvert.cxx)
63 target_link_libraries(clitkImageConvert clitkImageConvertLib clitkCommon)
64 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
66 add_executable(clitkBinarizeImage clitkBinarizeImage.cxx)
67 target_link_libraries(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
68 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
70 add_executable(clitkProfileImage clitkProfileImage.cxx)
71 target_link_libraries(clitkProfileImage clitkProfileImageLib clitkCommon)
72 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkProfileImage)
74 add_executable(clitkHistogramImage clitkHistogramImage.cxx)
75 target_link_libraries(clitkHistogramImage clitkHistogramImageLib clitkCommon)
76 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkHistogramImage)
78 WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
79 add_executable(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
80 target_link_libraries(clitkVFResample clitkCommon)
81 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
83 WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
84 add_executable(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
85 target_link_libraries(clitkVFInterpolate clitkCommon)
86 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
88 WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
89 add_executable(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
90 target_link_libraries(clitkImageCreate clitkCommon)
91 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
93 WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
94 add_executable(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
95 target_link_libraries(clitkZeroVF clitkCommon)
96 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
98 WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
99 add_executable(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
100 target_link_libraries(clitkSplitImage clitkCommon )
101 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
103 WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
104 add_executable(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
105 target_link_libraries(clitkWriteDicomSeries clitkCommon )
106 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
108 WRAP_GGO(clitkImage2Dicom_GGO_C clitkImage2Dicom.ggo)
109 add_executable(clitkImage2Dicom clitkImage2Dicom.cxx ${clitkImage2Dicom_GGO_C})
110 target_link_libraries(clitkImage2Dicom clitkCommon )
111 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2Dicom)
113 WRAP_GGO(clitkSpect2Dicom_GGO_C clitkSpect2Dicom.ggo)
114 add_executable(clitkSpect2Dicom clitkSpect2Dicom.cxx ${clitkSpect2Dicom_GGO_C})
115 target_link_libraries(clitkSpect2Dicom clitkCommon )
116 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSpect2Dicom)
118 WRAP_GGO(clitkChangeDicomTag_GGO_C clitkChangeDicomTag.ggo)
119 add_executable(clitkChangeDicomTag clitkChangeDicomTag.cxx ${clitkChangeDicomTag_GGO_C})
120 target_link_libraries(clitkChangeDicomTag clitkCommon )
121 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeDicomTag)
123 WRAP_GGO(clitkGateSimulation2Dicom_GGO_C clitkGateSimulation2Dicom.ggo)
124 add_executable(clitkGateSimulation2Dicom clitkGateSimulation2Dicom.cxx ${clitkGateSimulation2Dicom_GGO_C})
125 target_link_libraries(clitkGateSimulation2Dicom clitkCommon )
126 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGateSimulation2Dicom)
128 WRAP_GGO(clitkPartitionEnergyWindowDicom_GGO_C clitkPartitionEnergyWindowDicom.ggo)
129 add_executable(clitkPartitionEnergyWindowDicom clitkPartitionEnergyWindowDicom.cxx ${clitkPartitionEnergyWindowDicom_GGO_C})
130 target_link_libraries(clitkPartitionEnergyWindowDicom clitkCommon )
131 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPartitionEnergyWindowDicom)
133 WRAP_GGO(clitkUpdateVRTagDicom_GGO_C clitkUpdateVRTagDicom.ggo)
134 add_executable(clitkUpdateVRTagDicom clitkUpdateVRTagDicom.cxx ${clitkUpdateVRTagDicom_GGO_C})
135 target_link_libraries(clitkUpdateVRTagDicom clitkCommon )
136 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUpdateVRTagDicom)
138 WRAP_GGO(clitkImage2DicomDose_GGO_C clitkImage2DicomDose.ggo)
139 add_executable(clitkImage2DicomDose clitkImage2DicomDose.cxx ${clitkImage2DicomDose_GGO_C})
140 target_link_libraries(clitkImage2DicomDose clitkCommon)
141 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImage2DicomDose)
143 WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
144 add_executable(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
145 ${clitkMedianTemporalDimension_GGO_C})
146 target_link_libraries(clitkMedianTemporalDimension clitkCommon )
147 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
149 WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
150 add_executable(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
151 target_link_libraries(clitkWarpImage clitkCommon)
152 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
154 WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
155 add_executable(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
156 target_link_libraries(clitkInvertVF clitkCommon)
157 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
159 WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
160 add_library(clitkAffineTransformLib clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
161 add_executable(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
162 target_link_libraries(clitkAffineTransform clitkCommon )
163 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
165 WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
166 add_executable(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
167 target_link_libraries(clitkElastixTransformToMatrix clitkAffineTransformLib clitkCommon )
168 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
170 WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
171 add_executable(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
172 target_link_libraries(clitkMatrixToElastixTransform clitkCommon )
173 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
175 WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
176 add_executable(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
177 target_link_libraries(clitkMatrixMultiply clitkCommon )
178 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
180 WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
181 add_executable(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
182 target_link_libraries(clitkMatrixInverse clitkCommon )
183 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
185 WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
186 add_executable(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
187 target_link_libraries(clitkSetBackground clitkCommon)
188 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
190 WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
191 add_executable(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
192 target_link_libraries(clitkGammaIndex clitkCommon)
193 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
195 add_executable(clitkImageArithm clitkImageArithm.cxx)
196 target_link_libraries(clitkImageArithm clitkImageArithmImageLib clitkCommon )
197 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
199 add_executable(clitkVectorArithm clitkVectorArithm.cxx)
200 target_link_libraries(clitkVectorArithm clitkVectorArithmLib clitkCommon )
201 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
203 WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
204 add_executable(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
205 target_link_libraries(clitkUnsharpMask clitkCommon )
206 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
208 WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
209 add_executable(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
210 target_link_libraries(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
211 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
213 WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
214 add_executable(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
215 target_link_libraries(clitkMinMaxMask clitkCommon )
216 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
218 WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
219 add_executable(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
220 target_link_libraries(clitkAutoCrop clitkCommon )
221 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
223 WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
224 add_executable(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
225 target_link_libraries(clitkDicomRTStruct2Image clitkDicomRTStruct)
226 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
228 if(CLITK_USE_SYSTEM_GDCM)
229 WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
230 add_executable(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
231 target_link_libraries(clitkImage2DicomRTStruct clitkDicomRTStruct)
233 #include pugiXML to parse XML
234 WRAP_GGO(clitkXml2DicomRTStruct_GGO_C clitkXml2DicomRTStruct.ggo)
235 add_executable(clitkXml2DicomRTStruct ../utilities/pugixml/pugixml.cpp clitkXml2DicomRTStruct.cxx ${clitkXml2DicomRTStruct_GGO_C})
236 target_link_libraries(clitkXml2DicomRTStruct clitkDicomRTStruct)
239 WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
240 add_executable(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
241 target_link_libraries(clitkComposeVF clitkCommon )
242 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
244 WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
245 add_executable(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
246 target_link_libraries(clitkMergeSequence clitkCommon)
247 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
249 WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
250 add_executable(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
251 target_link_libraries(clitkBackProjectImage clitkCommon)
252 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
254 add_executable(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
255 target_link_libraries(clitkCropImage clitkCropImageLib clitkCommon)
256 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
258 # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
259 # add_executable(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
260 # target_link_libraries(clitkExtractSlice clitkCommon)
261 #set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
263 WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
264 add_executable(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
265 target_link_libraries(clitkFlipImage clitkCommon)
266 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
268 WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
269 add_executable(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
270 target_link_libraries(clitkMirrorPadImage clitkCommon)
271 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
273 WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
274 add_executable(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
275 target_link_libraries(clitkImageMoment clitkCommon)
276 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
278 WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
279 add_executable(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
280 target_link_libraries(clitkImageStatistics clitkCommon)
281 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
283 WRAP_GGO(clitkSUVPeak_GGO_C clitkSUVPeak.ggo)
284 add_executable(clitkSUVPeak clitkSUVPeak.cxx clitkSUVPeakGenericFilter.cxx ${clitkSUVPeak_GGO_C})
285 target_link_libraries(clitkSUVPeak clitkCommon)
286 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSUVPeak)
288 WRAP_GGO(clitkRTStructStatistics_GGO_C clitkRTStructStatistics.ggo)
289 add_executable(clitkRTStructStatistics clitkRTStructStatistics.cxx clitkRTStructStatisticsGenericFilter.cxx ${clitkRTStructStatistics_GGO_C})
290 target_link_libraries(clitkRTStructStatistics clitkCommon)
291 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRTStructStatistics)
293 WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
294 add_executable(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
295 target_link_libraries(clitkVFConvert clitkCommon )
296 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
298 WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
299 add_executable(clitkImageToVectorImage clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
300 target_link_libraries(clitkImageToVectorImage clitkCommon)
301 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
303 WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
304 add_executable(clitkVectorImageToImage clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
305 target_link_libraries(clitkVectorImageToImage clitkCommon)
306 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
308 WRAP_GGO(clitkNVectorImageTo4DImage_GGO_C clitkNVectorImageTo4DImage.ggo)
309 add_executable(clitkNVectorImageTo4DImage clitkNVectorImageTo4DImage.cxx clitkNVectorImageTo4DImageGenericFilter.cxx ${clitkNVectorImageTo4DImage_GGO_C})
310 target_link_libraries(clitkNVectorImageTo4DImage clitkCommon)
311 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNVectorImageTo4DImage)
313 WRAP_GGO(clitk4DImageToNVectorImage_GGO_C clitk4DImageToNVectorImage.ggo)
314 add_executable(clitk4DImageToNVectorImage clitk4DImageToNVectorImage.cxx clitk4DImageToNVectorImageGenericFilter.cxx ${clitk4DImageToNVectorImage_GGO_C})
315 target_link_libraries(clitk4DImageToNVectorImage clitkCommon)
316 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitk4DImageToNVectorImage)
318 add_executable(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
319 target_link_libraries(clitkMIP clitkMIPLib clitkCommon)
320 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
322 WRAP_GGO(clitkSum_GGO_C clitkSum.ggo)
323 add_executable(clitkSum clitkSum.cxx ${clitkSum_GGO_C})
324 target_link_libraries(clitkSum clitkCommon)
325 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSum)
327 WRAP_GGO(clitkExtrude_GGO_C clitkExtrude.ggo)
328 add_executable(clitkExtrude clitkExtrude.cxx ${clitkExtrude_GGO_C})
329 target_link_libraries(clitkExtrude clitkCommon)
330 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtrude)
332 WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
333 add_executable(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
334 target_link_libraries(clitkTransformLandmarks clitkCommon)
335 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
337 WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
338 add_executable(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
339 target_link_libraries(clitkMaskLandmarks clitkCommon)
340 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
342 WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
343 add_executable(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
344 target_link_libraries(clitkJacobianImage clitkCommon)
345 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
347 WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
348 add_executable(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
349 target_link_libraries(clitkPadImage clitkCommon)
350 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
352 WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
353 add_executable(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
354 target_link_libraries(clitkCatImage clitkCommon)
355 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
357 WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
358 add_executable(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
359 clitkAnisotropicDiffusionGenericFilter.cxx
360 ${clitkAnisotropicDiffusion_GGO_C})
361 target_link_libraries(clitkAnisotropicDiffusion clitkCommon)
362 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
364 WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
365 add_executable(clitkChangeImageInfo clitkChangeImageInfo.cxx
366 clitkChangeImageInfoGenericFilter.cxx
367 ${clitkChangeImageInfo_GGO_C})
368 target_link_libraries(clitkChangeImageInfo clitkCommon)
369 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
371 WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
372 add_executable(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
373 target_link_libraries(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
374 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
376 WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
377 add_executable(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
378 target_link_libraries(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
379 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
381 WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
382 add_executable(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
383 target_link_libraries(clitkNormalizeImageFilter clitkCommon )
384 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
386 WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
387 add_executable(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
388 target_link_libraries(clitkImageGradientMagnitude clitkCommon )
389 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
391 WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
392 add_executable(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
393 target_link_libraries(clitkImageLaplacian clitkCommon )
394 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
396 WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
397 add_executable(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
398 target_link_libraries(clitkImageIntensityWindowing clitkCommon )
399 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
401 WRAP_GGO(clitkMaskOfIntegratedIntensity_GGO_C clitkMaskOfIntegratedIntensity.ggo)
402 add_executable(clitkMaskOfIntegratedIntensity clitkMaskOfIntegratedIntensity.cxx ${clitkMaskOfIntegratedIntensity_GGO_C})
403 target_link_libraries(clitkMaskOfIntegratedIntensity clitkCommon )
404 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskOfIntegratedIntensity)
407 WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
408 add_executable(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
409 target_link_libraries(clitkBlurImage clitkCommon )
410 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
412 #=========================================================
413 option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
415 find_package(ROOT REQUIRED)
417 message(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
420 "Cannot build without ROOT. Please set ROOTSYS environement variable.")
422 include_directories(${ROOT_INCLUDE_DIR})
423 link_directories(${ROOT_LIBRARY_DIR})
424 WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
425 add_executable(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
426 target_link_libraries(clitkMergeRootFiles ${ROOT_LIBRARIES})
427 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
429 #=========================================================
432 #=========================================================
433 if(CLITK_EXPERIMENTAL)
434 WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
435 add_executable(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
436 target_link_libraries(clitkBinaryImageToMesh clitkCommon)
437 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
439 WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
440 add_executable(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
441 target_link_libraries(clitkMeshToBinaryImage clitkCommon)
442 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
444 WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
445 add_executable(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
446 target_link_libraries(clitkMeshViewer clitkCommon)
447 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
448 endif(CLITK_EXPERIMENTAL)
449 #=========================================================
452 #=========================================================
453 WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
454 add_executable(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
455 target_link_libraries(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
456 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
458 WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
459 add_executable(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
460 target_link_libraries(clitkDicomRTPlan2Gate clitkCommon)
461 set(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
462 #=========================================================
465 install(TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
467 endif(CLITK_BUILD_TOOLS)